| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355867
Identifier: 119355867
GI number: 119355867
Start: 10369
End: 11061
Strand: Reverse
Name: 119355867
Synonym: Cpha266_0013
Alternate gene names: NA
Gene position: 11061-10369 (Counterclockwise)
Preceding gene: 119355868
Following gene: 119355866
Centisome position: 0.35
GC content: 43.72
Gene sequence:
>693_bases ATGAATGCATTGGCAGATGGTGACCCTGAAACGTTGAGACTCAGCATTGATACGAAAGCGACTGTTCATGTTGGCCAATA TTCACGAGGTGGGAAATCTCGTGGAATCAAAGCTGTCGAGGCATGGGATCATGACATGCGACCTAAAGAGAAACTTGTTC CAGGCGGTATACTTGAGCCAGTCAGCGGCAAATCGTTTTTGTTTTTCGGTAGCAGTAACAAGACCAGTGACTTTCTTGTT GACGGTCTTGAGTTGTGGTGGAATGAACGTAAGTCAGAACTGTATAACGTCAAACAGTTGGTCATCAACATGGATAATGG CCCGGAATGTAATGGACGGCGAAGTCAATTTCTGTACCGAATGACCATGTTTGCTGATATGACAGGGCTTAACATTAGAT TGATTTATTATCCACCCTACCACAGTAAATATAACAGTATTGAGCGCTACTGGGCAGGGTTGGAAAAATCATGGAATGGC TATCTCCTTGAAAGTGTGACAACAGTTATAAATCGTGCTGGTAACTTTGCTTGGAGAGGAATAGCCGCAAAGGCAAGGCT TGTTGATACGGTGTACCAAAAGGGAGTCAAGCTCTGTGGTAAGGATAAAAAGAATCTGGAAAAACGACTGATGCGTTCAC CCAGCCTTCATTGGTGGGATATCAGCATCAGCCCTAAAACGGTATTTTTATAA
Upstream 100 bases:
>100_bases ATATTTTGAACCGTCAAAACTATCGATTACGTACTGTTCAGAAAACCAAGGTTGAAAAAAAACAGCAGAAACCGACGCCA TCTTCGAAAACGTCTGGCAA
Downstream 100 bases:
>100_bases TGACGGAGTCCCTTATGGTCAGGAGTGACTGATCAGCATTTGTCGAGCAACTTGTAGAACAGTCCTTCATAAATTTGATA CGGGCGGTTTTTCATGGCGT
Product: transposase
Products: NA
Alternate protein names: Rhodopirellula Transposase; Transposase Family Protein; Rhodopirellula Transposase Family Protein
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNALADGDPETLRLSIDTKATVHVGQYSRGGKSRGIKAVEAWDHDMRPKEKLVPGGILEPVSGKSFLFFGSSNKTSDFLV DGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYRMTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNG YLLESVTTVINRAGNFAWRGIAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL
Sequences:
>Translated_230_residues MNALADGDPETLRLSIDTKATVHVGQYSRGGKSRGIKAVEAWDHDMRPKEKLVPGGILEPVSGKSFLFFGSSNKTSDFLV DGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYRMTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNG YLLESVTTVINRAGNFAWRGIAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL >Mature_230_residues MNALADGDPETLRLSIDTKATVHVGQYSRGGKSRGIKAVEAWDHDMRPKEKLVPGGILEPVSGKSFLFFGSSNKTSDFLV DGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYRMTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNG YLLESVTTVINRAGNFAWRGIAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26320; Mature: 26320
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALADGDPETLRLSIDTKATVHVGQYSRGGKSRGIKAVEAWDHDMRPKEKLVPGGILEP CCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCC VSGKSFLFFGSSNKTSDFLVDGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYR CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEHEEEECCCCCCCCCHHHHHHHH MTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNGYLLESVTTVINRAGNFAWRG HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHH IAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEC >Mature Secondary Structure MNALADGDPETLRLSIDTKATVHVGQYSRGGKSRGIKAVEAWDHDMRPKEKLVPGGILEP CCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCC VSGKSFLFFGSSNKTSDFLVDGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYR CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEHEEEECCCCCCCCCHHHHHHHH MTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNGYLLESVTTVINRAGNFAWRG HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHH IAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA