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The map label for this gene is trg [C]

Identifier: 118581865

GI number: 118581865

Start: 3826763

End: 3828034

Strand: Reverse

Name: trg [C]

Synonym: Ppro_3465

Alternate gene names: 118581865

Gene position: 3828034-3826763 (Counterclockwise)

Preceding gene: 118581870

Following gene: 118581862

Centisome position: 95.51

GC content: 57.47

Gene sequence:

>1272_bases
ATGCTGAAGTCATGGTTTTACGGCCAGAGTCTGGCAACAAAAATGTTCATTACGATCTCCATTGTCATGCTGTGCGCCGT
CAGCCTGGGAGCCCTGTCTCTGTACCAGCTGTGGTGCAGCGAAAATTTCCTGCAGGAGCTCGCGCGCCAGCACCAGATCG
CACCGGAGCGGATCGCCGAAGGCACCCGGATGTTTGAGCTGTTCCGCAACCTGTCCATCGGCATACTGCTGGCAGGCATC
GTGCTCTGCTCCTGGCTGGCCCATTTCACCGTCAGGACCGTTGTCTGCAAGTCGCTCTGGTATGCACTGATTGCGCTGGA
GAAAATCGCCCAAGGGGATTTGACCCAGAACATCAACGTGAAGAGCAACGAAGAGATCGGCAAGCTGTTCTGTGCCATGA
AAACGATCATCGACAAACTGCGCGCCGTTTCAGGAGACATCAACAATCTGACCCATACGTTGGCGGACAACTCGCGGGAA
CTGCTTGCTACCACCCAGGAGATGAACCACAACGCCCACGCCCAGGCTGCCCAGACGGATCAGGTTGCCAACGCGTCACT
GGAGATGTCCCAAACGCTTCAGGACATAGCCGGAAGCGCCGAACAGGCCGCCAATGCCGCCAGGGAAACCAATACGGCTG
CCAACAACGGCATGGAGGCGGTTGCCGGAGTTGTGGCCGAGATGAACAAAATCGTCAAATCCGTCCAGGATTCTTCGGAA
ACCATTGAAAAACTGGGCGAGTCCAGTGCACAGATCGGCAATATCGTTGCCACCATCGAGGATGTGGCCGATCAGACCAA
TCTGTTGGCCTTGAACGCCGCCATTGAGGCGGCCCGGGCCGGCGAACATGGCCGCGGTTTCGCGGTGGTGGCGGACGAGG
TTCGGGCCCTGGCGGAGCGAACTGCCAAGGCGACCCAGGAAATCGGCAGGATGATCAAAGCCATACAGGTGGACACGGAA
TATGCAGTAACAAGTATGTCGACCAGCAGAAAAGAGGCTGACGGCGGATTGGTAAAGGCGGGAGAGGCAAGTCAGGCTCT
GGAGTACATCGTAACCGCATCCAACAACAGCATGGACATGGTCAGCAGGATTGCCACGGCAACCGAACAGCAGTCGGCGG
TCACGTCGGAAGTGTCCATGAATGTGGAAAAGATCGCCAACGGAACCAAATCCACCGAAGAGTCGGCTGAGCAGATCGAG
GAATCGGCGCGGCTGCTGTCAAAGCTGTCCGGCGATCTGGAACGGACGGCGGCCTGGTTCAAGGTCGCATGA

Upstream 100 bases:

>100_bases
TTTTGTCGAGGTGCGCTTACCGCTTGAATGTGCGGCAAAAAGGTTTTATCACTACGCCAATGATATTACGGCACTTCGCC
ATCAAAAGGAGAGATTGACT

Downstream 100 bases:

>100_bases
GTTGAGGAGCCCGCCTCTCTCCGGCAACTGGTTTGCCCGGAGAGAGGCGGCGTCCCCGGTCCCTGGGGAGCGGATCAATT
CATGACGTCTGAAGGGAGGG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MLKSWFYGQSLATKMFITISIVMLCAVSLGALSLYQLWCSENFLQELARQHQIAPERIAEGTRMFELFRNLSIGILLAGI
VLCSWLAHFTVRTVVCKSLWYALIALEKIAQGDLTQNINVKSNEEIGKLFCAMKTIIDKLRAVSGDINNLTHTLADNSRE
LLATTQEMNHNAHAQAAQTDQVANASLEMSQTLQDIAGSAEQAANAARETNTAANNGMEAVAGVVAEMNKIVKSVQDSSE
TIEKLGESSAQIGNIVATIEDVADQTNLLALNAAIEAARAGEHGRGFAVVADEVRALAERTAKATQEIGRMIKAIQVDTE
YAVTSMSTSRKEADGGLVKAGEASQALEYIVTASNNSMDMVSRIATATEQQSAVTSEVSMNVEKIANGTKSTEESAEQIE
ESARLLSKLSGDLERTAAWFKVA

Sequences:

>Translated_423_residues
MLKSWFYGQSLATKMFITISIVMLCAVSLGALSLYQLWCSENFLQELARQHQIAPERIAEGTRMFELFRNLSIGILLAGI
VLCSWLAHFTVRTVVCKSLWYALIALEKIAQGDLTQNINVKSNEEIGKLFCAMKTIIDKLRAVSGDINNLTHTLADNSRE
LLATTQEMNHNAHAQAAQTDQVANASLEMSQTLQDIAGSAEQAANAARETNTAANNGMEAVAGVVAEMNKIVKSVQDSSE
TIEKLGESSAQIGNIVATIEDVADQTNLLALNAAIEAARAGEHGRGFAVVADEVRALAERTAKATQEIGRMIKAIQVDTE
YAVTSMSTSRKEADGGLVKAGEASQALEYIVTASNNSMDMVSRIATATEQQSAVTSEVSMNVEKIANGTKSTEESAEQIE
ESARLLSKLSGDLERTAAWFKVA
>Mature_423_residues
MLKSWFYGQSLATKMFITISIVMLCAVSLGALSLYQLWCSENFLQELARQHQIAPERIAEGTRMFELFRNLSIGILLAGI
VLCSWLAHFTVRTVVCKSLWYALIALEKIAQGDLTQNINVKSNEEIGKLFCAMKTIIDKLRAVSGDINNLTHTLADNSRE
LLATTQEMNHNAHAQAAQTDQVANASLEMSQTLQDIAGSAEQAANAARETNTAANNGMEAVAGVVAEMNKIVKSVQDSSE
TIEKLGESSAQIGNIVATIEDVADQTNLLALNAAIEAARAGEHGRGFAVVADEVRALAERTAKATQEIGRMIKAIQVDTE
YAVTSMSTSRKEADGGLVKAGEASQALEYIVTASNNSMDMVSRIATATEQQSAVTSEVSMNVEKIANGTKSTEESAEQIE
ESARLLSKLSGDLERTAAWFKVA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=362, Percent_Identity=31.767955801105, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI2367378, Length=312, Percent_Identity=28.8461538461538, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1788194, Length=329, Percent_Identity=31.306990881459, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=29.96632996633, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI1789453, Length=280, Percent_Identity=31.7857142857143, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 45584; Mature: 45584

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSWFYGQSLATKMFITISIVMLCAVSLGALSLYQLWCSENFLQELARQHQIAPERIAE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GTRMFELFRNLSIGILLAGIVLCSWLAHFTVRTVVCKSLWYALIALEKIAQGDLTQNINV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KSNEEIGKLFCAMKTIIDKLRAVSGDINNLTHTLADNSRELLATTQEMNHNAHAQAAQTD
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
QVANASLEMSQTLQDIAGSAEQAANAARETNTAANNGMEAVAGVVAEMNKIVKSVQDSSE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHCHHH
TIEKLGESSAQIGNIVATIEDVADQTNLLALNAAIEAARAGEHGRGFAVVADEVRALAER
HHHHHCCCHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TAKATQEIGRMIKAIQVDTEYAVTSMSTSRKEADGGLVKAGEASQALEYIVTASNNSMDM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCCCCCHHH
VSRIATATEQQSAVTSEVSMNVEKIANGTKSTEESAEQIEESARLLSKLSGDLERTAAWF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
KVA
CCC
>Mature Secondary Structure
MLKSWFYGQSLATKMFITISIVMLCAVSLGALSLYQLWCSENFLQELARQHQIAPERIAE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GTRMFELFRNLSIGILLAGIVLCSWLAHFTVRTVVCKSLWYALIALEKIAQGDLTQNINV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KSNEEIGKLFCAMKTIIDKLRAVSGDINNLTHTLADNSRELLATTQEMNHNAHAQAAQTD
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
QVANASLEMSQTLQDIAGSAEQAANAARETNTAANNGMEAVAGVVAEMNKIVKSVQDSSE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHCHHH
TIEKLGESSAQIGNIVATIEDVADQTNLLALNAAIEAARAGEHGRGFAVVADEVRALAER
HHHHHCCCHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TAKATQEIGRMIKAIQVDTEYAVTSMSTSRKEADGGLVKAGEASQALEYIVTASNNSMDM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCCCCCHHH
VSRIATATEQQSAVTSEVSMNVEKIANGTKSTEESAEQIEESARLLSKLSGDLERTAAWF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
KVA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA