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The map label for this gene is pdtaR [H]

Identifier: 118581859

GI number: 118581859

Start: 3818888

End: 3819505

Strand: Direct

Name: pdtaR [H]

Synonym: Ppro_3459

Alternate gene names: 118581859

Gene position: 3818888-3819505 (Clockwise)

Preceding gene: 118581856

Following gene: 118581860

Centisome position: 95.28

GC content: 55.34

Gene sequence:

>618_bases
ATGTTCGATGCACTCATCGTGATCTCAGACTGCATCCGGGAGGGAAACGATATGAGAAGCATACTGATTTGCGATGATGA
ACCGGTGGTCCGGATGAGCCTGAAGGCAATGCTGCTGGATGCGGGATTCGATGAGGTTCTGGAGTGCGGGGACGGCAAAA
GCGCCGTGGAAATGGCACTGGCCGGTTTTCCCGATATGGCGATCCTGGATGTTGCCATGCCGAAACTGGACGGCATTAGC
GCCGCAACGGAGATCAGAAAGAAGCTCAAGATTCCGATCCTGCTTCTGACCAACTGTTACGACGTACGGACGGCGAAACG
GGCAGCGGAAAGCGGAATTGCCGCTTTTTTAACCAAGCCTTTGCGCGAACAGGACCTGCTTCCGGCCATCGAGATCGCCA
TGGCCCATGCGGATGAGGTTGATGGCCTGAAGGAGAAGATCGACGATCTGCGGGAAGTTATCGAGAACAGGAAGATTATT
GAGAGGGCAAAGGGGATGCTGATGGAGACGGAGCGGTTGAGCGAGGCCGACGCCTATCGCACCCTGCAGAAGATGGCCAT
GGACAAGCGCAAAACCCTGCGTCAGGTAGCGGACAGCATCCTGAAAAGCGCGAAATAA

Upstream 100 bases:

>100_bases
TCCCTCACCGCGGGAGCGTCAACGAAAAAAGCCGGCCGGGAAGCAGTGCCGCTGCCCGTTTTTCCACGCTCCGTCATCGG
ACGCCGAGCAGGGTGCTGGC

Downstream 100 bases:

>100_bases
TCCGCGCAGCACGCCTGGCTGGGGAGAAGCGGAGGGAATCATCAAAAAAACTTGACGAAAACGGATTATTGAATAAATGT
TGTCGGGCGCGCCCAAGAGG

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFDALIVISDCIREGNDMRSILICDDEPVVRMSLKAMLLDAGFDEVLECGDGKSAVEMALAGFPDMAILDVAMPKLDGIS
AATEIRKKLKIPILLLTNCYDVRTAKRAAESGIAAFLTKPLREQDLLPAIEIAMAHADEVDGLKEKIDDLREVIENRKII
ERAKGMLMETERLSEADAYRTLQKMAMDKRKTLRQVADSILKSAK

Sequences:

>Translated_205_residues
MFDALIVISDCIREGNDMRSILICDDEPVVRMSLKAMLLDAGFDEVLECGDGKSAVEMALAGFPDMAILDVAMPKLDGIS
AATEIRKKLKIPILLLTNCYDVRTAKRAAESGIAAFLTKPLREQDLLPAIEIAMAHADEVDGLKEKIDDLREVIENRKII
ERAKGMLMETERLSEADAYRTLQKMAMDKRKTLRQVADSILKSAK
>Mature_205_residues
MFDALIVISDCIREGNDMRSILICDDEPVVRMSLKAMLLDAGFDEVLECGDGKSAVEMALAGFPDMAILDVAMPKLDGIS
AATEIRKKLKIPILLLTNCYDVRTAKRAAESGIAAFLTKPLREQDLLPAIEIAMAHADEVDGLKEKIDDLREVIENRKII
ERAKGMLMETERLSEADAYRTLQKMAMDKRKTLRQVADSILKSAK

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22755; Mature: 22755

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDALIVISDCIREGNDMRSILICDDEPVVRMSLKAMLLDAGFDEVLECGDGKSAVEMAL
CCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHH
AGFPDMAILDVAMPKLDGISAATEIRKKLKIPILLLTNCYDVRTAKRAAESGIAAFLTKP
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
LREQDLLPAIEIAMAHADEVDGLKEKIDDLREVIENRKIIERAKGMLMETERLSEADAYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLQKMAMDKRKTLRQVADSILKSAK
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDALIVISDCIREGNDMRSILICDDEPVVRMSLKAMLLDAGFDEVLECGDGKSAVEMAL
CCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHH
AGFPDMAILDVAMPKLDGISAATEIRKKLKIPILLLTNCYDVRTAKRAAESGIAAFLTKP
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
LREQDLLPAIEIAMAHADEVDGLKEKIDDLREVIENRKIIERAKGMLMETERLSEADAYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLQKMAMDKRKTLRQVADSILKSAK
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]