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The map label for this gene is yfbG [C]

Identifier: 118581804

GI number: 118581804

Start: 3758220

End: 3759155

Strand: Reverse

Name: yfbG [C]

Synonym: Ppro_3404

Alternate gene names: 118581804

Gene position: 3759155-3758220 (Counterclockwise)

Preceding gene: 118581805

Following gene: 118581803

Centisome position: 93.79

GC content: 58.97

Gene sequence:

>936_bases
ATGCGCATTCTGGTTACCGGCGGCGCCGGTTTCATTGGTTCGCACCTGTGCGAACGCCTGCTGAACGAGGGGCACGACGT
CATCTGCCTGGACAACTTTTTCACCGGATCCAAGGACAACATCATCCACCTGATGGACAACCACCGCTTCGAGCTGGTGC
GCCACGACATCACCCAGCCAATCCTCCTGGAGGTGGACCGGATCTACAACCTGGCCTGCCCCGCCTCCCCCATCCACTAC
CAGTACAACCCGGTCAAGACCACCAAGACCAGCGTCATGGGCACCATCAACATGCTCGGCCTGGCCAAGCGGGTGAAAGC
CCGCATTCTCCAGGCCTCCACCTCCGAGGTCTACGGCGACCCCCAGATCCATCCCCAGACCGAGGAGTACTGGGGAAACG
TGAATCCGATCGGCATCCGCAGTTGCTATGACGAGGGGAAGCGGGTGGCCGAAACCCTGATGATGGACTACTACCGCCAG
AACAACGTGGATATCCGCATCATACGGATCTTCAACACCTACGGCCCCCGCATGGCGGAGAACGACGGCCGGGTTGTTTC
CAACTTCATCCTCCAGGCGCTGAGGAATCAGGATATCACCGTCTACGGTGACGGCTCCCAGACCCGCTCCTTCTGCTATG
TCTCCGACCTGGTGGAGGGGATGATCCGCATGATGGAGAACGACCAGGGTTTCATCGGTCCGGTCAACCTGGGCAATCCG
GGCGAATTCACCATGCTAGAGCTTGCCGAAAAGGTGATCGAGCAGACCGGCTGCTCCTCGAAAATCATTTTTGCCGAACT
GCCCCAGGATGATCCGAAACAGAGGCAGCCGGACATTTCACTGGCACGGCAGTGGCTCGGATGGGAGCCTGCGGTTCAAC
TGGATGAGGGGTTGAACATGGCCATAGCGTATTTCAGGAAGAACGCGGCTGTCTGA

Upstream 100 bases:

>100_bases
GCTGGAAGCAGAAGACCAGCTTCAGGGAACTTGTGGAGATGATGGCCGACGCGGACCTTGAACTGGCCCAGCGGGAACGC
CGGGCGGATGGAGTAAAATA

Downstream 100 bases:

>100_bases
TATCCGCATGCGTTGCTGTTTTCATACGCTTTCAGCCGCTGTGCCAGTATTTTTCCGCGAATCAGGCTTGTCCCATCCCG
TTTTACCGGGACATACCGGC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRILVTGGAGFIGSHLCERLLNEGHDVICLDNFFTGSKDNIIHLMDNHRFELVRHDITQPILLEVDRIYNLACPASPIHY
QYNPVKTTKTSVMGTINMLGLAKRVKARILQASTSEVYGDPQIHPQTEEYWGNVNPIGIRSCYDEGKRVAETLMMDYYRQ
NNVDIRIIRIFNTYGPRMAENDGRVVSNFILQALRNQDITVYGDGSQTRSFCYVSDLVEGMIRMMENDQGFIGPVNLGNP
GEFTMLELAEKVIEQTGCSSKIIFAELPQDDPKQRQPDISLARQWLGWEPAVQLDEGLNMAIAYFRKNAAV

Sequences:

>Translated_311_residues
MRILVTGGAGFIGSHLCERLLNEGHDVICLDNFFTGSKDNIIHLMDNHRFELVRHDITQPILLEVDRIYNLACPASPIHY
QYNPVKTTKTSVMGTINMLGLAKRVKARILQASTSEVYGDPQIHPQTEEYWGNVNPIGIRSCYDEGKRVAETLMMDYYRQ
NNVDIRIIRIFNTYGPRMAENDGRVVSNFILQALRNQDITVYGDGSQTRSFCYVSDLVEGMIRMMENDQGFIGPVNLGNP
GEFTMLELAEKVIEQTGCSSKIIFAELPQDDPKQRQPDISLARQWLGWEPAVQLDEGLNMAIAYFRKNAAV
>Mature_311_residues
MRILVTGGAGFIGSHLCERLLNEGHDVICLDNFFTGSKDNIIHLMDNHRFELVRHDITQPILLEVDRIYNLACPASPIHY
QYNPVKTTKTSVMGTINMLGLAKRVKARILQASTSEVYGDPQIHPQTEEYWGNVNPIGIRSCYDEGKRVAETLMMDYYRQ
NNVDIRIIRIFNTYGPRMAENDGRVVSNFILQALRNQDITVYGDGSQTRSFCYVSDLVEGMIRMMENDQGFIGPVNLGNP
GEFTMLELAEKVIEQTGCSSKIIFAELPQDDPKQRQPDISLARQWLGWEPAVQLDEGLNMAIAYFRKNAAV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=306, Percent_Identity=60.7843137254902, Blast_Score=405, Evalue=1e-113,
Organism=Homo sapiens, GI7657641, Length=325, Percent_Identity=27.3846153846154, Blast_Score=109, Evalue=3e-24,
Organism=Escherichia coli, GI1788589, Length=353, Percent_Identity=26.3456090651558, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1786974, Length=325, Percent_Identity=26.4615384615385, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI48994969, Length=342, Percent_Identity=26.0233918128655, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788353, Length=342, Percent_Identity=24.5614035087719, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788366, Length=355, Percent_Identity=27.6056338028169, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788365, Length=326, Percent_Identity=22.6993865030675, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17539532, Length=306, Percent_Identity=58.8235294117647, Blast_Score=387, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI71982035, Length=332, Percent_Identity=25.6024096385542, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71982038, Length=334, Percent_Identity=25.4491017964072, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17568069, Length=335, Percent_Identity=27.4626865671642, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115532424, Length=340, Percent_Identity=27.3529411764706, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6319493, Length=338, Percent_Identity=23.0769230769231, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21356223, Length=309, Percent_Identity=61.8122977346278, Blast_Score=403, Evalue=1e-113,
Organism=Drosophila melanogaster, GI19923002, Length=346, Percent_Identity=25.1445086705202, Blast_Score=89, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35225; Mature: 35225

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILVTGGAGFIGSHLCERLLNEGHDVICLDNFFTGSKDNIIHLMDNHRFELVRHDITQP
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCH
ILLEVDRIYNLACPASPIHYQYNPVKTTKTSVMGTINMLGLAKRVKARILQASTSEVYGD
HHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
PQIHPQTEEYWGNVNPIGIRSCYDEGKRVAETLMMDYYRQNNVDIRIIRIFNTYGPRMAE
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC
NDGRVVSNFILQALRNQDITVYGDGSQTRSFCYVSDLVEGMIRMMENDQGFIGPVNLGNP
CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GEFTMLELAEKVIEQTGCSSKIIFAELPQDDPKQRQPDISLARQWLGWEPAVQLDEGLNM
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCCH
AIAYFRKNAAV
HHHHHHHCCCC
>Mature Secondary Structure
MRILVTGGAGFIGSHLCERLLNEGHDVICLDNFFTGSKDNIIHLMDNHRFELVRHDITQP
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCH
ILLEVDRIYNLACPASPIHYQYNPVKTTKTSVMGTINMLGLAKRVKARILQASTSEVYGD
HHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
PQIHPQTEEYWGNVNPIGIRSCYDEGKRVAETLMMDYYRQNNVDIRIIRIFNTYGPRMAE
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC
NDGRVVSNFILQALRNQDITVYGDGSQTRSFCYVSDLVEGMIRMMENDQGFIGPVNLGNP
CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GEFTMLELAEKVIEQTGCSSKIIFAELPQDDPKQRQPDISLARQWLGWEPAVQLDEGLNM
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCCH
AIAYFRKNAAV
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]