| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is trxA [H]
Identifier: 118581780
GI number: 118581780
Start: 3731857
End: 3732186
Strand: Direct
Name: trxA [H]
Synonym: Ppro_3380
Alternate gene names: 118581780
Gene position: 3731857-3732186 (Clockwise)
Preceding gene: 118581770
Following gene: 118581781
Centisome position: 93.11
GC content: 58.79
Gene sequence:
>330_bases ATGGCCAGCGACAAGGTACTTGCGTTAAATGACGCCAATTTCGAACGGGATGTACTGCAGTCAGACCTGCCGGTTCTGGT TGATTTCTGGGCCACCTGGTGCTCACCCTGCAAGGCGATTGCCCCGCTGATCGACGCAGTGGCGGACGAATATGCCGGCA AGATCAAGGTAGGCAAGGTCAATGTTGACGAGAACCCCTCAACCCCGGGAAAATACGGCGTCCGCGGCATCCCGACCCTG GTGCTGTTCAAGGGTGGCGTCGTGGTGGATCAGGTCGTCGGCGCCATCCCCAAATCCCAGCTGGAAGCCCTGATCGCCAA GGCATTCTGA
Upstream 100 bases:
>100_bases TGTTTCAACTAAACCTGTGGCCGGGAGTTTGGGCTTGATTTTTTCCCGCCCTGGTATATCATTCACCAACTTTAAACTTA TCCAAAGGAGACAAACGTCT
Downstream 100 bases:
>100_bases TCGGCATGGGATTGGTCCGGCTGCTCCGCCGACATGCCCCGGCGCTGCTCGTCCTGCTGATCCTCTTCCCGGCGGCGGCC CATACTGTGCCGCTGGCCGG
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MASDKVLALNDANFERDVLQSDLPVLVDFWATWCSPCKAIAPLIDAVADEYAGKIKVGKVNVDENPSTPGKYGVRGIPTL VLFKGGVVVDQVVGAIPKSQLEALIAKAF
Sequences:
>Translated_109_residues MASDKVLALNDANFERDVLQSDLPVLVDFWATWCSPCKAIAPLIDAVADEYAGKIKVGKVNVDENPSTPGKYGVRGIPTL VLFKGGVVVDQVVGAIPKSQLEALIAKAF >Mature_108_residues ASDKVLALNDANFERDVLQSDLPVLVDFWATWCSPCKAIAPLIDAVADEYAGKIKVGKVNVDENPSTPGKYGVRGIPTLV LFKGGVVVDQVVGAIPKSQLEALIAKAF
Specific function: Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=95, Percent_Identity=37.8947368421053, Blast_Score=78, Evalue=2e-15, Organism=Homo sapiens, GI5031973, Length=82, Percent_Identity=41.4634146341463, Blast_Score=73, Evalue=5e-14, Organism=Homo sapiens, GI21361657, Length=83, Percent_Identity=40.9638554216867, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI87082331, Length=103, Percent_Identity=56.3106796116505, Blast_Score=131, Evalue=1e-32, Organism=Escherichia coli, GI1788936, Length=92, Percent_Identity=41.304347826087, Blast_Score=96, Evalue=6e-22, Organism=Escherichia coli, GI87081747, Length=108, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=4e-14, Organism=Caenorhabditis elegans, GI212646193, Length=93, Percent_Identity=34.4086021505376, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17554386, Length=87, Percent_Identity=42.5287356321839, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17556044, Length=82, Percent_Identity=36.5853658536585, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17510299, Length=83, Percent_Identity=42.1686746987952, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71980565, Length=98, Percent_Identity=36.734693877551, Blast_Score=69, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71998175, Length=99, Percent_Identity=37.3737373737374, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17549970, Length=80, Percent_Identity=40, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71980562, Length=100, Percent_Identity=37, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323072, Length=97, Percent_Identity=42.2680412371134, Blast_Score=73, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6321648, Length=93, Percent_Identity=39.7849462365591, Blast_Score=73, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319925, Length=82, Percent_Identity=32.9268292682927, Blast_Score=62, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573567, Length=96, Percent_Identity=39.5833333333333, Blast_Score=86, Evalue=5e-18, Organism=Drosophila melanogaster, GI24639826, Length=77, Percent_Identity=46.7532467532467, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI19921434, Length=81, Percent_Identity=40.7407407407407, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI21358065, Length=96, Percent_Identity=39.5833333333333, Blast_Score=72, Evalue=9e-14, Organism=Drosophila melanogaster, GI24639068, Length=102, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-13, Organism=Drosophila melanogaster, GI24664269, Length=71, Percent_Identity=42.2535211267606, Blast_Score=69, Evalue=6e-13, Organism=Drosophila melanogaster, GI17648013, Length=81, Percent_Identity=40.7407407407407, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI24583090, Length=81, Percent_Identity=40.7407407407407, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI24658597, Length=92, Percent_Identity=35.8695652173913, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11599; Mature: 11467
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDKVLALNDANFERDVLQSDLPVLVDFWATWCSPCKAIAPLIDAVADEYAGKIKVGKV CCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE NVDENPSTPGKYGVRGIPTLVLFKGGVVVDQVVGAIPKSQLEALIAKAF ECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure ASDKVLALNDANFERDVLQSDLPVLVDFWATWCSPCKAIAPLIDAVADEYAGKIKVGKV CCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE NVDENPSTPGKYGVRGIPTLVLFKGGVVVDQVVGAIPKSQLEALIAKAF ECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8756494; 8590279; 8905231; 9298645 [H]