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The map label for this gene is ccsA [H]

Identifier: 118581778

GI number: 118581778

Start: 3730307

End: 3731113

Strand: Reverse

Name: ccsA [H]

Synonym: Ppro_3378

Alternate gene names: 118581778

Gene position: 3731113-3730307 (Counterclockwise)

Preceding gene: 118581779

Following gene: 118581777

Centisome position: 93.09

GC content: 61.21

Gene sequence:

>807_bases
ATGATGAGCAAATTTTTTTTCTACTGTACCCTCGTCCTGTACGGGGGGGCCACCCTGGCCTACCTGATCTATCTGCTCAG
GACAACGCCACTGCTGGCAACCTGGGCCCACCGGCTGATCTCGGCCGGATTCATCGCCCATCTGCTCTCCACCATCCACC
GCGCCGTCCTCACCGGCCAGCTGCCGCTGACCAGCATGCACGAATCGCTCTCCTTCTTCAGCCTGGCCATCGTGGGGGCG
TTCATCTTCTTCGAGCGCAGTTACCGGGTGGCCATACTGGGGTCATTCGTCACCCCCCTGGCGCTCTTGGCAATCATCGC
CTCCAGCGCCCTGCCGGACGAGATCAGGCATATCTCCCCCATACTGCGCAGCAACTGGTTCTGGGGCCACGCCCTGATGG
CGTTCATAAGCTACGCCGCCTTTACCATTACCTTTGCCACCTCGGCCATGTACCTGCTCCAGGAACATTTCCTGAAGAGG
AAGCGCTTCGGCGCCCTGTTCCGCAAGCTGCCGTCGCTGGAAATCATGGACGACATCAGCTATCGCTGCCTGACCATCGG
TTTCCCGCTCCTGACCCTGGCCATCATCTCCGGCGCCATCTGGTCGGTACAGGCGGGCGGGAATTACTGGAACTGGGCCG
ACCGCAAGCAGGTCTGGTCCATGATCACCTGGTTCATCTACGCCGCGCTGCTGCACGGGAGGCTGACCACCGGCTGGCGG
GGACGGCGGGCTGCGCTGCTCTCCATCCTCGGGTTCATCGTCCTTTTGATCACCTTTTTCGGCATGAGGCACAGCGTCAC
ATGGTAG

Upstream 100 bases:

>100_bases
AGCTGTTGACGGAGGGGAATGGCAGCACCTACAATGCAAAACTTGTGCGTTTTCAGGCAGAGCGTGTGCTGGGCCAGCTG
GCCGTTGACAGGGATGGGGC

Downstream 100 bases:

>100_bases
CCCAGTCAGGACAGCGGTTGTCGCCAGGGGCGGGGGAGACTGCGGCGCAATGAATATCATCGTTGTCGGCCTCTCCCACA
AGACAGCGCCGGTGGAGGTA

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MMSKFFFYCTLVLYGGATLAYLIYLLRTTPLLATWAHRLISAGFIAHLLSTIHRAVLTGQLPLTSMHESLSFFSLAIVGA
FIFFERSYRVAILGSFVTPLALLAIIASSALPDEIRHISPILRSNWFWGHALMAFISYAAFTITFATSAMYLLQEHFLKR
KRFGALFRKLPSLEIMDDISYRCLTIGFPLLTLAIISGAIWSVQAGGNYWNWADRKQVWSMITWFIYAALLHGRLTTGWR
GRRAALLSILGFIVLLITFFGMRHSVTW

Sequences:

>Translated_268_residues
MMSKFFFYCTLVLYGGATLAYLIYLLRTTPLLATWAHRLISAGFIAHLLSTIHRAVLTGQLPLTSMHESLSFFSLAIVGA
FIFFERSYRVAILGSFVTPLALLAIIASSALPDEIRHISPILRSNWFWGHALMAFISYAAFTITFATSAMYLLQEHFLKR
KRFGALFRKLPSLEIMDDISYRCLTIGFPLLTLAIISGAIWSVQAGGNYWNWADRKQVWSMITWFIYAALLHGRLTTGWR
GRRAALLSILGFIVLLITFFGMRHSVTW
>Mature_268_residues
MMSKFFFYCTLVLYGGATLAYLIYLLRTTPLLATWAHRLISAGFIAHLLSTIHRAVLTGQLPLTSMHESLSFFSLAIVGA
FIFFERSYRVAILGSFVTPLALLAIIASSALPDEIRHISPILRSNWFWGHALMAFISYAAFTITFATSAMYLLQEHFLKR
KRFGALFRKLPSLEIMDDISYRCLTIGFPLLTLAIISGAIWSVQAGGNYWNWADRKQVWSMITWFIYAALLHGRLTTGWR
GRRAALLSILGFIVLLITFFGMRHSVTW

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 30406; Mature: 30406

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKFFFYCTLVLYGGATLAYLIYLLRTTPLLATWAHRLISAGFIAHLLSTIHRAVLTGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPLTSMHESLSFFSLAIVGAFIFFERSYRVAILGSFVTPLALLAIIASSALPDEIRHISP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILRSNWFWGHALMAFISYAAFTITFATSAMYLLQEHFLKRKRFGALFRKLPSLEIMDDIS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
YRCLTIGFPLLTLAIISGAIWSVQAGGNYWNWADRKQVWSMITWFIYAALLHGRLTTGWR
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GRRAALLSILGFIVLLITFFGMRHSVTW
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMSKFFFYCTLVLYGGATLAYLIYLLRTTPLLATWAHRLISAGFIAHLLSTIHRAVLTGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPLTSMHESLSFFSLAIVGAFIFFERSYRVAILGSFVTPLALLAIIASSALPDEIRHISP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILRSNWFWGHALMAFISYAAFTITFATSAMYLLQEHFLKRKRFGALFRKLPSLEIMDDIS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
YRCLTIGFPLLTLAIISGAIWSVQAGGNYWNWADRKQVWSMITWFIYAALLHGRLTTGWR
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GRRAALLSILGFIVLLITFFGMRHSVTW
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA