| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is yaiE [C]
Identifier: 118581772
GI number: 118581772
Start: 3723502
End: 3723816
Strand: Reverse
Name: yaiE [C]
Synonym: Ppro_3372
Alternate gene names: 118581772
Gene position: 3723816-3723502 (Counterclockwise)
Preceding gene: 118581773
Following gene: 118581771
Centisome position: 92.91
GC content: 56.19
Gene sequence:
>315_bases ATGTCAGAATTCAGCAACGTTACGGTTATCAAGAAGGCCAACATCTACTTCGAGGGCAAGGTCGCAAGCCACACCGTCCT CTTCCCCGACGGCACCAAGAAGACGCTGGGCATCATGCAGGCCGGCGACTACGAATTTTCCACCGCCAATGCCGAGGTCA TGGAGATACTCTCCGGCACGCTGGAATGGCAGATGAAGGGGGAATGCTGCTGGAAGACCATAGGCGCCGGCGAATCATTC CAGATTCCGGCCGACTCGGTCTTCCTGATGAAGGTGCCGGCGGTCGCGGACTACTGCTGTTCGTATATACAGTAA
Upstream 100 bases:
>100_bases CCGTGAATCCTTTTATACCAGGGTCTCAGGGCGCTTTTCTTTTGCCTCATTCCGCGGATTGCGGGTATAACCGTCTGAAT ACATTCGCTAAGGAGGCAGC
Downstream 100 bases:
>100_bases AGGTTTAGCCCACACAAAAGCGCAGGGGCACGAGCTGTGCGTCTCAACAGCATAATTCTCCCGTTGTTTCAGTCTCTCTT CGTGCCTCTGTGCCTCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSEFSNVTVIKKANIYFEGKVASHTVLFPDGTKKTLGIMQAGDYEFSTANAEVMEILSGTLEWQMKGECCWKTIGAGESF QIPADSVFLMKVPAVADYCCSYIQ
Sequences:
>Translated_104_residues MSEFSNVTVIKKANIYFEGKVASHTVLFPDGTKKTLGIMQAGDYEFSTANAEVMEILSGTLEWQMKGECCWKTIGAGESF QIPADSVFLMKVPAVADYCCSYIQ >Mature_103_residues SEFSNVTVIKKANIYFEGKVASHTVLFPDGTKKTLGIMQAGDYEFSTANAEVMEILSGTLEWQMKGECCWKTIGAGESFQ IPADSVFLMKVPAVADYCCSYIQ
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family
Homologues:
Organism=Escherichia coli, GI1786590, Length=92, Percent_Identity=33.695652173913, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3372_PELPD (A1AUE4)
Other databases:
- EMBL: CP000482 - RefSeq: YP_903022.1 - ProteinModelPortal: A1AUE4 - SMR: A1AUE4 - STRING: A1AUE4 - GeneID: 4571579 - GenomeReviews: CP000482_GR - KEGG: ppd:Ppro_3372 - eggNOG: COG3123 - HOGENOM: HBG297920 - OMA: TFNTGAP - PhylomeDB: A1AUE4 - HAMAP: MF_01537 - InterPro: IPR009664 - InterPro: IPR014710 - Gene3D: G3DSA:2.60.120.10
Pfam domain/function: PF06865 DUF1255
EC number: NA
Molecular weight: Translated: 11448; Mature: 11317
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFSNVTVIKKANIYFEGKVASHTVLFPDGTKKTLGIMQAGDYEFSTANAEVMEILSGT CCCCCCEEEEEECCEEEECCCCCEEEECCCCCCCEEEEEECCCEEECCCCHHHHHHHCCC LEWQMKGECCWKTIGAGESFQIPADSVFLMKVPAVADYCCSYIQ EEEEECCCEEEEECCCCCCEECCCCCEEEEECCHHHHHHHHHCC >Mature Secondary Structure SEFSNVTVIKKANIYFEGKVASHTVLFPDGTKKTLGIMQAGDYEFSTANAEVMEILSGT CCCCCEEEEEECCEEEECCCCCEEEECCCCCCCEEEEEECCCEEECCCCHHHHHHHCCC LEWQMKGECCWKTIGAGESFQIPADSVFLMKVPAVADYCCSYIQ EEEEECCCEEEEECCCCCCEECCCCCEEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA