| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581617
Identifier: 118581617
GI number: 118581617
Start: 3532908
End: 3534338
Strand: Direct
Name: 118581617
Synonym: Ppro_3216
Alternate gene names: NA
Gene position: 3532908-3534338 (Clockwise)
Preceding gene: 118581616
Following gene: 118581618
Centisome position: 88.15
GC content: 62.4
Gene sequence:
>1431_bases ATGAAACGAATTATCCTCGCCCTCTGCCTGTCGCTCTGCACGGTTGCAGTTGTCTTTGCCGCCGAAGGGGGGAAAGCCGA TCCCCGCAGCATGAGCTTTCCGGAACTGCGCTTCCAGATACCCAGGGCTGAACGAATCGTCCTTACCTGCGGCATGCCGG TCTACCTGCTGGCCGACAGGGAACTGCCCATCATCAGCATGACCGCGCTGGTGCGCACCGGCTCGGTCTACGACCCAGCC AACAGATCCGGCCTGGCCACGCTGACCGGCAGCGCCATGCGCAACGGCGGCGCCGCTGGCATGTCTGCGGAGAAGATGGA CGACGAACTGGAGTTCATGGCTTCAACCGTTGAGAGCGCTATCGCCCAAGACATGGGGACGGTCTCCTTAAGCAGCCTGA CCAGGAATTTCAACCAGACGCTGCGCATCTTCCGCGACGTGCTGCTGCATCCCGATTTCTGCGACAAGCGCCTGGAGCTG ATCCGCAGGCAGATGATCGAGGGGCTGCGCCGCCAGAACGACGATCCCAAGGAAATCGCCGATCGGGAGATTGCCAGGGC CATCTACGCCGGGCACCCCCTGGGGGCGGTGCCGAGCTTTGCATCGGTCACGGCCATCACCCGCCAGGAGGTGGTTGACT TTCACCGCCGTTTCTTTCGCGTGGACAACATGATCCTGGCCGTGTCCGGCGACTTTGAGCGCACCGCCCTGATCCGCCAA CTGAACGAGGTTTTCGGCCCGAGGCGCCCCACCGCTCCCCTGAGCGTGGATAAGATTCCCCAGCCCCCTGCCATCTTCAG GCCGGAGGTTCTCCATGGCAAGAAATCGGTCAACCAGTCCGTGATCCGCATGGGACACCTGGGACCGACCAAGGACGATC CGGACATCCACGCCGTACGCATCCTGGATTACATCCTGGGGGGCAGTTTCACCTCGCGCCTGACCATGGAGATCCGCACC AACCGGGGGCTGGCCTACAGCGCCGGCAGCCACTTCGACATCGGCCGCCGCTTCAGCGGCAGCTTCATCGCCGAAACCGA AACCAAGGCCGAGAGCACCGCAAAGGCAATCTCCCTGATGAGGGAGATCATCACCACCATGACCCGGGAGGAGGTCAGCG ACCAGGAGCTGAAGTCGGCGCAGGAGTACATCATCAACTCCTTCATGTTCGGTTTCACCTCCCCGGCGGCCGTGGCAATC CAGCGGGCCAGACTGGAGTATTACGGCTATCCGATCGACTACCTGGAGACCTACCGCGACAGCATCGCCCGGGTGACAAA GCGGGACGTGCTCTCCGCAGCCCGCACATACCTGAAACCGGAGGCGTTCAAGATCGTGGTGATTGGGGACGCGAAAAGCT TCGACAAACCGCTGACGACCTTCGGAGCGGTGCGGGAACTGGACCTGAGCCAGAGCGTTCCCGCCAACTGA
Upstream 100 bases:
>100_bases CGGCGGTCACTGCGGCCGACATCCGGCGGGTGGCCAACCATTACTTCAGCAGGGAGAACCGCATGGTCGGTTTCATCACC ACACAGGGGGATGTAAAGAA
Downstream 100 bases:
>100_bases TCCCCGGGCGATGAACGCATCTGTCCGGCAAGAGACGCGGATTCGTTGTAAAGTTTGTCAGGGAAACTGTCGAAGGGAAC TCAGAAGCACGAGACCATCC
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADRELPIISMTALVRTGSVYDPA NRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESAIAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLEL IRRQMIEGLRRQNDDPKEIADREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVRILDYILGGSFTSRLTMEIRT NRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLMREIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAI QRARLEYYGYPIDYLETYRDSIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN
Sequences:
>Translated_476_residues MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADRELPIISMTALVRTGSVYDPA NRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESAIAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLEL IRRQMIEGLRRQNDDPKEIADREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVRILDYILGGSFTSRLTMEIRT NRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLMREIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAI QRARLEYYGYPIDYLETYRDSIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN >Mature_476_residues MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADRELPIISMTALVRTGSVYDPA NRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESAIAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLEL IRRQMIEGLRRQNDDPKEIADREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVRILDYILGGSFTSRLTMEIRT NRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLMREIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAI QRARLEYYGYPIDYLETYRDSIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 52931; Mature: 52931
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCEEEEECCCCEEEEECC ELPIISMTALVRTGSVYDPANRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESA CCCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLELIRRQMIEGLRRQNDDPKEIA HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH DREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVR HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHH ILDYILGGSFTSRLTMEIRTNRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLM HHHHHHCCCHHHEEEEEEECCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHH REIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAIQRARLEYYGYPIDYLETYRD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH SIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCEEEEECCCCEEEEECC ELPIISMTALVRTGSVYDPANRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESA CCCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLELIRRQMIEGLRRQNDDPKEIA HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH DREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVR HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHH ILDYILGGSFTSRLTMEIRTNRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLM HHHHHHCCCHHHEEEEEEECCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHH REIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAIQRARLEYYGYPIDYLETYRD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH SIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]