Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118581617

Identifier: 118581617

GI number: 118581617

Start: 3532908

End: 3534338

Strand: Direct

Name: 118581617

Synonym: Ppro_3216

Alternate gene names: NA

Gene position: 3532908-3534338 (Clockwise)

Preceding gene: 118581616

Following gene: 118581618

Centisome position: 88.15

GC content: 62.4

Gene sequence:

>1431_bases
ATGAAACGAATTATCCTCGCCCTCTGCCTGTCGCTCTGCACGGTTGCAGTTGTCTTTGCCGCCGAAGGGGGGAAAGCCGA
TCCCCGCAGCATGAGCTTTCCGGAACTGCGCTTCCAGATACCCAGGGCTGAACGAATCGTCCTTACCTGCGGCATGCCGG
TCTACCTGCTGGCCGACAGGGAACTGCCCATCATCAGCATGACCGCGCTGGTGCGCACCGGCTCGGTCTACGACCCAGCC
AACAGATCCGGCCTGGCCACGCTGACCGGCAGCGCCATGCGCAACGGCGGCGCCGCTGGCATGTCTGCGGAGAAGATGGA
CGACGAACTGGAGTTCATGGCTTCAACCGTTGAGAGCGCTATCGCCCAAGACATGGGGACGGTCTCCTTAAGCAGCCTGA
CCAGGAATTTCAACCAGACGCTGCGCATCTTCCGCGACGTGCTGCTGCATCCCGATTTCTGCGACAAGCGCCTGGAGCTG
ATCCGCAGGCAGATGATCGAGGGGCTGCGCCGCCAGAACGACGATCCCAAGGAAATCGCCGATCGGGAGATTGCCAGGGC
CATCTACGCCGGGCACCCCCTGGGGGCGGTGCCGAGCTTTGCATCGGTCACGGCCATCACCCGCCAGGAGGTGGTTGACT
TTCACCGCCGTTTCTTTCGCGTGGACAACATGATCCTGGCCGTGTCCGGCGACTTTGAGCGCACCGCCCTGATCCGCCAA
CTGAACGAGGTTTTCGGCCCGAGGCGCCCCACCGCTCCCCTGAGCGTGGATAAGATTCCCCAGCCCCCTGCCATCTTCAG
GCCGGAGGTTCTCCATGGCAAGAAATCGGTCAACCAGTCCGTGATCCGCATGGGACACCTGGGACCGACCAAGGACGATC
CGGACATCCACGCCGTACGCATCCTGGATTACATCCTGGGGGGCAGTTTCACCTCGCGCCTGACCATGGAGATCCGCACC
AACCGGGGGCTGGCCTACAGCGCCGGCAGCCACTTCGACATCGGCCGCCGCTTCAGCGGCAGCTTCATCGCCGAAACCGA
AACCAAGGCCGAGAGCACCGCAAAGGCAATCTCCCTGATGAGGGAGATCATCACCACCATGACCCGGGAGGAGGTCAGCG
ACCAGGAGCTGAAGTCGGCGCAGGAGTACATCATCAACTCCTTCATGTTCGGTTTCACCTCCCCGGCGGCCGTGGCAATC
CAGCGGGCCAGACTGGAGTATTACGGCTATCCGATCGACTACCTGGAGACCTACCGCGACAGCATCGCCCGGGTGACAAA
GCGGGACGTGCTCTCCGCAGCCCGCACATACCTGAAACCGGAGGCGTTCAAGATCGTGGTGATTGGGGACGCGAAAAGCT
TCGACAAACCGCTGACGACCTTCGGAGCGGTGCGGGAACTGGACCTGAGCCAGAGCGTTCCCGCCAACTGA

Upstream 100 bases:

>100_bases
CGGCGGTCACTGCGGCCGACATCCGGCGGGTGGCCAACCATTACTTCAGCAGGGAGAACCGCATGGTCGGTTTCATCACC
ACACAGGGGGATGTAAAGAA

Downstream 100 bases:

>100_bases
TCCCCGGGCGATGAACGCATCTGTCCGGCAAGAGACGCGGATTCGTTGTAAAGTTTGTCAGGGAAACTGTCGAAGGGAAC
TCAGAAGCACGAGACCATCC

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADRELPIISMTALVRTGSVYDPA
NRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESAIAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLEL
IRRQMIEGLRRQNDDPKEIADREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ
LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVRILDYILGGSFTSRLTMEIRT
NRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLMREIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAI
QRARLEYYGYPIDYLETYRDSIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN

Sequences:

>Translated_476_residues
MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADRELPIISMTALVRTGSVYDPA
NRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESAIAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLEL
IRRQMIEGLRRQNDDPKEIADREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ
LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVRILDYILGGSFTSRLTMEIRT
NRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLMREIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAI
QRARLEYYGYPIDYLETYRDSIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN
>Mature_476_residues
MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADRELPIISMTALVRTGSVYDPA
NRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESAIAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLEL
IRRQMIEGLRRQNDDPKEIADREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ
LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVRILDYILGGSFTSRLTMEIRT
NRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLMREIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAI
QRARLEYYGYPIDYLETYRDSIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 52931; Mature: 52931

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCEEEEECCCCEEEEECC
ELPIISMTALVRTGSVYDPANRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESA
CCCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLELIRRQMIEGLRRQNDDPKEIA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH
LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
ILDYILGGSFTSRLTMEIRTNRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLM
HHHHHHCCCHHHEEEEEEECCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHH
REIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAIQRARLEYYGYPIDYLETYRD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
SIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRIILALCLSLCTVAVVFAAEGGKADPRSMSFPELRFQIPRAERIVLTCGMPVYLLADR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCEEEEECCCCEEEEECC
ELPIISMTALVRTGSVYDPANRSGLATLTGSAMRNGGAAGMSAEKMDDELEFMASTVESA
CCCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IAQDMGTVSLSSLTRNFNQTLRIFRDVLLHPDFCDKRLELIRRQMIEGLRRQNDDPKEIA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DREIARAIYAGHPLGAVPSFASVTAITRQEVVDFHRRFFRVDNMILAVSGDFERTALIRQ
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH
LNEVFGPRRPTAPLSVDKIPQPPAIFRPEVLHGKKSVNQSVIRMGHLGPTKDDPDIHAVR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
ILDYILGGSFTSRLTMEIRTNRGLAYSAGSHFDIGRRFSGSFIAETETKAESTAKAISLM
HHHHHHCCCHHHEEEEEEECCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHH
REIITTMTREEVSDQELKSAQEYIINSFMFGFTSPAAVAIQRARLEYYGYPIDYLETYRD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
SIARVTKRDVLSAARTYLKPEAFKIVVIGDAKSFDKPLTTFGAVRELDLSQSVPAN
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]