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The map label for this gene is ychJ [C]

Identifier: 118581554

GI number: 118581554

Start: 3459078

End: 3459560

Strand: Direct

Name: ychJ [C]

Synonym: Ppro_3153

Alternate gene names: 118581554

Gene position: 3459078-3459560 (Clockwise)

Preceding gene: 118581553

Following gene: 118581555

Centisome position: 86.3

GC content: 58.8

Gene sequence:

>483_bases
ATGAATACCTGTCCCTGTGGAAGCGGCACGGCATATGAAGATTGTTGCCAGCCGATCATCAGCGGCGCACGACCGGCGCA
AACGGCTGAAGAACTCATGAGGGCGCGCTACAGCGCCCATGTCAAGGTGGATGTCGACTTTATCTTAACGAGTACCCACC
CGGATCACCGCAAGGGGTACGATCACCAGGGGACCAGGGAATGGGCCGAGAAGAGCGAATGGCTGGGGCTGGAAATCCTT
GGCACCCAGCAGGGGGGAGCGCAAGACGAAACCGGCCAGGTGGAGTTCATCGCCCATTACCGTGATGGAGAGGGTTCCCA
TGACCATCACGAAAACGCCCTGTTCCAGCGCAAGAACGGAGTCTGGCTTTTCACCGACGGCGTACGGGTCCGCCCCAAGC
CGTTAATCGTGGAGAAAATCGGCCGCAACGACCCGTGCAGATGCGGGAGCGGCCAGAAATACAAGAAATGCTGCGGGAAA
TAG

Upstream 100 bases:

>100_bases
GTGCTCCCCCGCTCCCGGAAAAACCATTTGACAAGGAGGGCAAGAGCATGTAACGGCAGTAGCCCGAGCAGCATTCGATT
ATCGAGGAGGAGATGCACCG

Downstream 100 bases:

>100_bases
CGCCTGCACACCAATGAAAAAGGGCGCCCTGGCCATGAAAGACCAGAGCGCCCTTTTTTTCATTACTGCTAGGAGTCTGT
CGGGCTTAACGCATTCAGCC

Product: SecC motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNTCPCGSGTAYEDCCQPIISGARPAQTAEELMRARYSAHVKVDVDFILTSTHPDHRKGYDHQGTREWAEKSEWLGLEIL
GTQQGGAQDETGQVEFIAHYRDGEGSHDHHENALFQRKNGVWLFTDGVRVRPKPLIVEKIGRNDPCRCGSGQKYKKCCGK

Sequences:

>Translated_160_residues
MNTCPCGSGTAYEDCCQPIISGARPAQTAEELMRARYSAHVKVDVDFILTSTHPDHRKGYDHQGTREWAEKSEWLGLEIL
GTQQGGAQDETGQVEFIAHYRDGEGSHDHHENALFQRKNGVWLFTDGVRVRPKPLIVEKIGRNDPCRCGSGQKYKKCCGK
>Mature_160_residues
MNTCPCGSGTAYEDCCQPIISGARPAQTAEELMRARYSAHVKVDVDFILTSTHPDHRKGYDHQGTREWAEKSEWLGLEIL
GTQQGGAQDETGQVEFIAHYRDGEGSHDHHENALFQRKNGVWLFTDGVRVRPKPLIVEKIGRNDPCRCGSGQKYKKCCGK

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=157, Percent_Identity=38.2165605095541, Blast_Score=113, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 17903; Mature: 17903

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTCPCGSGTAYEDCCQPIISGARPAQTAEELMRARYSAHVKVDVDFILTSTHPDHRKGY
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCHHHCCC
DHQGTREWAEKSEWLGLEILGTQQGGAQDETGQVEFIAHYRDGEGSHDHHENALFQRKNG
CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHEECCCC
VWLFTDGVRVRPKPLIVEKIGRNDPCRCGSGQKYKKCCGK
EEEEECCCEECCCCHHHHHCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MNTCPCGSGTAYEDCCQPIISGARPAQTAEELMRARYSAHVKVDVDFILTSTHPDHRKGY
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCHHHCCC
DHQGTREWAEKSEWLGLEILGTQQGGAQDETGQVEFIAHYRDGEGSHDHHENALFQRKNG
CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHEECCCC
VWLFTDGVRVRPKPLIVEKIGRNDPCRCGSGQKYKKCCGK
EEEEECCCEECCCCHHHHHCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA