Click here to switch to the map view.

The map label for this gene is yddV [C]

Identifier: 118581552

GI number: 118581552

Start: 3458424

End: 3458726

Strand: Reverse

Name: yddV [C]

Synonym: Ppro_3151

Alternate gene names: 118581552

Gene position: 3458726-3458424 (Counterclockwise)

Preceding gene: 118581568

Following gene: 118581549

Centisome position: 86.3

GC content: 49.83

Gene sequence:

>303_bases
GTGCGTGAAACCGATATTGTTGCCCGTGTGGGGGGAGACGAGTTCCTCATCATCGTGACCGGTCTGGAACATGCGAATAA
CATAACAAAGATTGCGGAAAAACTGATGGCGGCGGTTACTCAGCCTCTTCTCTACAAGGGACAGCAGGCAGGGGTCGGCA
CGAGCATAGGCATTGCCGTATTTCCGCACGATTGTACGGATGAAGAAAAACTGGTTATGCTGGCTGACGAGACCATGTAT
GAAGTTAAAAAATCCGGCAAGAACGGCTACAGGTTTGCTAATGCAGCGGAAAAAAGAAGCTGA

Upstream 100 bases:

>100_bases
TGTTCATTGACTTGGATGGCTTCAAGGGGGCAACGACACTCTTGGTCACGATGCCGGCGACTATGTATTGAAACAGGTAG
CTCAACGGACGCTTTCGTGT

Downstream 100 bases:

>100_bases
ATGTTTGTAGTGAGCAGCTAGTCCCTACGTGATTGGGCAGTTTTTCGGTAATACCGTCGACACATCATTCATTGCGGCCG
ATTGCATCACGTGTTTTGAA

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MRETDIVARVGGDEFLIIVTGLEHANNITKIAEKLMAAVTQPLLYKGQQAGVGTSIGIAVFPHDCTDEEKLVMLADETMY
EVKKSGKNGYRFANAAEKRS

Sequences:

>Translated_100_residues
MRETDIVARVGGDEFLIIVTGLEHANNITKIAEKLMAAVTQPLLYKGQQAGVGTSIGIAVFPHDCTDEEKLVMLADETMY
EVKKSGKNGYRFANAAEKRS
>Mature_100_residues
MRETDIVARVGGDEFLIIVTGLEHANNITKIAEKLMAAVTQPLLYKGQQAGVGTSIGIAVFPHDCTDEEKLVMLADETMY
EVKKSGKNGYRFANAAEKRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 10916; Mature: 10916

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRETDIVARVGGDEFLIIVTGLEHANNITKIAEKLMAAVTQPLLYKGQQAGVGTSIGIAV
CCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
FPHDCTDEEKLVMLADETMYEVKKSGKNGYRFANAAEKRS
CCCCCCCCCCEEEEECHHHHHHHHCCCCCCEECCCCCCCC
>Mature Secondary Structure
MRETDIVARVGGDEFLIIVTGLEHANNITKIAEKLMAAVTQPLLYKGQQAGVGTSIGIAV
CCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
FPHDCTDEEKLVMLADETMYEVKKSGKNGYRFANAAEKRS
CCCCCCCCCCEEEEECHHHHHHHHCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]