| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581530
Identifier: 118581530
GI number: 118581530
Start: 3429928
End: 3431451
Strand: Direct
Name: 118581530
Synonym: Ppro_3129
Alternate gene names: NA
Gene position: 3429928-3431451 (Clockwise)
Preceding gene: 118581529
Following gene: 118581531
Centisome position: 85.58
GC content: 58.6
Gene sequence:
>1524_bases ATGGGAACTACAAACAATTGGATGGCGGATGGACTCAACGCTTACGTGTCTCTGGCTCGACAAGGCCTGGCTGAACGGAA ACTTGAGGTCGACATGGAAACCAAGAATCAGCAGATGCAGTTAGCTACCAATCAGGATCAGCGTTCAGCTGCCTCTGCCG GGCTGTCAAACCAGGCCACACAACTTCAGATCGACGAGGCCAAGACCAAACAGTCGGAGCGAACCAACTTCCAAAGCCAA CTGCGCGACTACATCACCATGAAAACGGCGGCGAACCCCTCTATCCCGAACACGCTTGACCCGGCAGAGATCGAGAGATC AACGCAGGAGGCCTACAACCTGGCGCATACCGCCAACATGCTGGGCCAGCTGCCCGACAACACGGCGCAGTCGTTCGGAG TTAAGGACTTGCCCCCCTATGCGCAACAGGTGTTGGTGGAGGGACCGGGCAAGGCGGCACGACTGCGAGCCGGAACGGTC CACAAAGACCCGAACACCGGCATGGAGTATTCCGTCACCGGCGATCTTGGCCCTGTCCATGTTGTGAAGAAGCCGGGGCA GCCGGCAGTCATCATGCCAACCATGATGGTGGCCGGGAAGGATGCCAACGGCCAGGTGGTGTCGTGGGAAGTGCCGTTCA CCGAAAATAAGTCCAACGACCCCAACGATCAGGTGCGGGCCATCACGCCTGACTTCCTGATGTACCGGGCGGGCAATCAG CTTGCAGCCTTGAAGAAGGCCCAGGAGAAAGGCATCTCCCCGGCGGTGGCGAGCGCGGAGGACAAATACAACATGATCCT CTCCATGCCGTATGAGAAGCAGCTTGAATGGTGGCAGGGAGTGATGAAAAACGAAACGGCCAAGAGGGAGAAGTACGTCA CCGACGCAGCTGTCGCCCGGGCCGCGCAGCCCTACGCGGATCAGATCAAGAAGCTCAGTGGCACGCCGGAACAGAAGCGC ACCTCCGCTACCGCCATCATGCTTGGCGCTCCCAGCGAAGTGGTAGATCACCTGTTGAAGTCATCCAAGGCTGTGAATGA TATGTTCCCCGACAGCAAGCGCAACGTCGTGGTGGCTAACACCGGGGACGGCGTGTATGCGGTGGATGGCGTTACCGGGC AGAAGGTTTCAAAGATAGGCGGGCCGACCAAGGTACCGAACTACGGTGGAGGGAAAAGCAGTGGCGGCGGGAGGTCAAGA AGCGGCTCATCCTCAAGCGAGCTGAAACCACGCGAACGCCTTACTTCCATCGACAAGGACATCAAGGAACTGCACACCGA CAACCGGGCCTTGCAAAAAGAACTGCGCATCACCTACGACCGGGAGGGCAAGTCCGGGATCAATCAGGCCATTGCCGAAA ACAACAGGCGGCTAAAAGAACTGTCTGGCGAGAAGTCCGCAATCATGGGCCGGGGCGGCGGACAAGCGCCACAGCAGCCC ACCAAGCCCCCTCTGACATCGTTCATCAGCAATTCCGGCAACAGCGTTACACCTCTCTCCCAGCGGTTCGGGCTGACCTT CTAA
Upstream 100 bases:
>100_bases CGCAATAGACGACATTTTGGAGTCAGCAGCCGGCGCAACCAGCGGCAAAGTAGTCAATCTTGATGCCTACCGTAACAGGA ACTAGCGAAAGGGGAAAACC
Downstream 100 bases:
>100_bases AAGGATAAACTAGACCGGCCACTCCCGGGTGATCTCGATAATGGGCGTGGCCGGTGACCATCTGAAACAGAGCAGGGAAA AGCCGCAAGTTTGTGGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MGTTNNWMADGLNAYVSLARQGLAERKLEVDMETKNQQMQLATNQDQRSAASAGLSNQATQLQIDEAKTKQSERTNFQSQ LRDYITMKTAANPSIPNTLDPAEIERSTQEAYNLAHTANMLGQLPDNTAQSFGVKDLPPYAQQVLVEGPGKAARLRAGTV HKDPNTGMEYSVTGDLGPVHVVKKPGQPAVIMPTMMVAGKDANGQVVSWEVPFTENKSNDPNDQVRAITPDFLMYRAGNQ LAALKKAQEKGISPAVASAEDKYNMILSMPYEKQLEWWQGVMKNETAKREKYVTDAAVARAAQPYADQIKKLSGTPEQKR TSATAIMLGAPSEVVDHLLKSSKAVNDMFPDSKRNVVVANTGDGVYAVDGVTGQKVSKIGGPTKVPNYGGGKSSGGGRSR SGSSSSELKPRERLTSIDKDIKELHTDNRALQKELRITYDREGKSGINQAIAENNRRLKELSGEKSAIMGRGGGQAPQQP TKPPLTSFISNSGNSVTPLSQRFGLTF
Sequences:
>Translated_507_residues MGTTNNWMADGLNAYVSLARQGLAERKLEVDMETKNQQMQLATNQDQRSAASAGLSNQATQLQIDEAKTKQSERTNFQSQ LRDYITMKTAANPSIPNTLDPAEIERSTQEAYNLAHTANMLGQLPDNTAQSFGVKDLPPYAQQVLVEGPGKAARLRAGTV HKDPNTGMEYSVTGDLGPVHVVKKPGQPAVIMPTMMVAGKDANGQVVSWEVPFTENKSNDPNDQVRAITPDFLMYRAGNQ LAALKKAQEKGISPAVASAEDKYNMILSMPYEKQLEWWQGVMKNETAKREKYVTDAAVARAAQPYADQIKKLSGTPEQKR TSATAIMLGAPSEVVDHLLKSSKAVNDMFPDSKRNVVVANTGDGVYAVDGVTGQKVSKIGGPTKVPNYGGGKSSGGGRSR SGSSSSELKPRERLTSIDKDIKELHTDNRALQKELRITYDREGKSGINQAIAENNRRLKELSGEKSAIMGRGGGQAPQQP TKPPLTSFISNSGNSVTPLSQRFGLTF >Mature_506_residues GTTNNWMADGLNAYVSLARQGLAERKLEVDMETKNQQMQLATNQDQRSAASAGLSNQATQLQIDEAKTKQSERTNFQSQL RDYITMKTAANPSIPNTLDPAEIERSTQEAYNLAHTANMLGQLPDNTAQSFGVKDLPPYAQQVLVEGPGKAARLRAGTVH KDPNTGMEYSVTGDLGPVHVVKKPGQPAVIMPTMMVAGKDANGQVVSWEVPFTENKSNDPNDQVRAITPDFLMYRAGNQL AALKKAQEKGISPAVASAEDKYNMILSMPYEKQLEWWQGVMKNETAKREKYVTDAAVARAAQPYADQIKKLSGTPEQKRT SATAIMLGAPSEVVDHLLKSSKAVNDMFPDSKRNVVVANTGDGVYAVDGVTGQKVSKIGGPTKVPNYGGGKSSGGGRSRS GSSSSELKPRERLTSIDKDIKELHTDNRALQKELRITYDREGKSGINQAIAENNRRLKELSGEKSAIMGRGGGQAPQQPT KPPLTSFISNSGNSVTPLSQRFGLTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54910; Mature: 54779
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTNNWMADGLNAYVSLARQGLAERKLEVDMETKNQQMQLATNQDQRSAASAGLSNQAT CCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCE QLQIDEAKTKQSERTNFQSQLRDYITMKTAANPSIPNTLDPAEIERSTQEAYNLAHTANM EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGQLPDNTAQSFGVKDLPPYAQQVLVEGPGKAARLRAGTVHKDPNTGMEYSVTGDLGPVH HHCCCCCHHHHCCCCCCCHHHHHHHHCCCCCHHEEECCCCCCCCCCCCEEEECCCCCCEE VVKKPGQPAVIMPTMMVAGKDANGQVVSWEVPFTENKSNDPNDQVRAITPDFLMYRAGNQ EEECCCCCEEEECCCEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEECHHHHHHHCCCH LAALKKAQEKGISPAVASAEDKYNMILSMPYEKQLEWWQGVMKNETAKREKYVTDAAVAR HHHHHHHHHCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AAQPYADQIKKLSGTPEQKRTSATAIMLGAPSEVVDHLLKSSKAVNDMFPDSKRNVVVAN HCCHHHHHHHHHCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE TGDGVYAVDGVTGQKVSKIGGPTKVPNYGGGKSSGGGRSRSGSSSSELKPRERLTSIDKD CCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH IKELHTDNRALQKELRITYDREGKSGINQAIAENNRRLKELSGEKSAIMGRGGGQAPQQP HHHHHCCHHHHHHHHHEEECCCCCHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCCCCCC TKPPLTSFISNSGNSVTPLSQRFGLTF CCCHHHHHHHCCCCCCCCHHHHCCCCC >Mature Secondary Structure GTTNNWMADGLNAYVSLARQGLAERKLEVDMETKNQQMQLATNQDQRSAASAGLSNQAT CCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCE QLQIDEAKTKQSERTNFQSQLRDYITMKTAANPSIPNTLDPAEIERSTQEAYNLAHTANM EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGQLPDNTAQSFGVKDLPPYAQQVLVEGPGKAARLRAGTVHKDPNTGMEYSVTGDLGPVH HHCCCCCHHHHCCCCCCCHHHHHHHHCCCCCHHEEECCCCCCCCCCCCEEEECCCCCCEE VVKKPGQPAVIMPTMMVAGKDANGQVVSWEVPFTENKSNDPNDQVRAITPDFLMYRAGNQ EEECCCCCEEEECCCEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEECHHHHHHHCCCH LAALKKAQEKGISPAVASAEDKYNMILSMPYEKQLEWWQGVMKNETAKREKYVTDAAVAR HHHHHHHHHCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AAQPYADQIKKLSGTPEQKRTSATAIMLGAPSEVVDHLLKSSKAVNDMFPDSKRNVVVAN HCCHHHHHHHHHCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE TGDGVYAVDGVTGQKVSKIGGPTKVPNYGGGKSSGGGRSRSGSSSSELKPRERLTSIDKD CCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH IKELHTDNRALQKELRITYDREGKSGINQAIAENNRRLKELSGEKSAIMGRGGGQAPQQP HHHHHCCHHHHHHHHHEEECCCCCHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCCCCCC TKPPLTSFISNSGNSVTPLSQRFGLTF CCCHHHHHHHCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA