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The map label for this gene is acoR [H]

Identifier: 118581510

GI number: 118581510

Start: 3410751

End: 3412751

Strand: Reverse

Name: acoR [H]

Synonym: Ppro_3109

Alternate gene names: 118581510

Gene position: 3412751-3410751 (Counterclockwise)

Preceding gene: 118581511

Following gene: 118581509

Centisome position: 85.15

GC content: 59.27

Gene sequence:

>2001_bases
ATGTTCGAACAAGAGCGGAGCAGACATAGGGAAACCGTATGCCAACTGGCGTGCGGACAGCACCAGGGAATCGTCAACCA
CAGCTTGCGACATGACGTACAGCCCCACATTTTGAGATCGTGGGAACGCTGCCTGACAAGATACAACCTCGACCCGTCCC
AGCTGGAGAAACCGATTCGGGTGGGGGACAAGGCTCTGGCCGACTACCGGGAACCGCTTGAGGATTTCCTGTTCTTCGCC
CAGTCCGGCATGCGGAAACTGTACCGAATGCTCTCCTCTGTCGGGTACGTGCTCCTGCTGTGCAACGCTGAAGGGGTGAC
CATCGATTATGTGGGGGATCCCAAGGATGAACGGGAGCATCGCCGAGCAGGGCTGTGTCCCGGAACGGTCTGGCAGGAAT
CGCTGGCAGGCACCTGTGGTGTTGGCACCTGTCTCGAGGAGCGCCGGGCCGTCACCATCCACCGGAATGAGCATTTTTTC
TCCCCCTTCATCGGTCTGAGCTGCAGCGCGGCGCCACTCTACCATCCTGACGGCACCTTGCTGGGAGCCCTGGATGCCTC
ACTGCTCCATTCCCCCGAATCCAAGGATTCCCAGGCGGTTGCTCTCCTGCTGGTCAATTCCCACGCCCGCCTGATAGAGA
ACGCCTATTTTGTCAGAAAGTGCCGGGATCACTGGATGATCCGCTTTAACAAGATGCAGGCTTTCGTCGAGGTCACAACG
GAGCAGATCATCGCCGTGAACGCGGACGGTTGTATCGTTGCCGCGAATTTCAACGCCATCAGCGAACTGGGCAGGCAGGG
GGGCGGCACCCCCGTCAATCGACAGCTGAGCGATATCTTTGAGCTGCGCATCGAGGAGCTGGTCGATAACGCCCTCAACA
GGACACAGATGGTCTTTGCCATCCGTGCCGTTGCCACCGGAATCCAGTACTTCGCGCTCTTTTCCGCGCCGGGAGCCAGA
ACCGTGCAGCCGGCCAGGCAGCACGGCAACAGTGACAGGGCGGCTCAGCCAAAGAACAGGCCACGTGCCCGTCTGGGGCT
GAACCAACTGGCGGGTGCCGATCCGCAGATGAGGCGCAACGCCACCCGCGCCCTGCGGGTGATGAACAGGGGGATTCCCA
TTTTGCTGACCGGTGAGACCGGCACCGGCAAGGAGGTCTTTGCGCGGGCAATTCATGAGTCCAGTGATCGGGCCGCAAAG
CCGTTCATCGCGCTGAACTGCGCATCCATCCCCGAATCCCTGATCGAAAGCGAGCTTTTCGGTTACCGGCAGGGGGCCTT
TACCGGTGCCCATATCAAGGGGATGCGCGGCAAAATCCTGCAGGCCGACGGCGGTACGCTCTTTCTTGACGAAATCGGTG
ATATGCCCCTGAGCCTGCAAACCAGGCTGCTGCGTGTTCTGGCTGAAAAAGAGGTTTTGCCGCTGGGAAGCGAAAGCCCG
GTCCGGGTCGATCTTAACGTTATCTGCGCGACCCTGCGCAACCTGGAGGAACTGGTACGTGACGGGAGGTTCAGGGAGGA
TCTGTACTACCGGCTGAACGGAATCACCATAACTCTGCCGCCGCTGCGGGAACGGGAGGACAGGGACATGCTGATCAGAA
ACGTGCTGTTGGCGGAACGCCAAAGCGGTGATGCCCGGATCAGCCAGGAAGCCTTCGATGCTCTTACGCGTCATTCCTGG
CCGGGGAATATCCGTGAGCTGCACAACCTGATACGATGTGCTCTGGCGGTGAGCGAAAACGGCATCATCACTCTGGATGA
CCTGCCGCCGGTGAAAAACGGGGGCAAGGCGGTATCGTTTCTCCCCGCTGCTTCATCGCCGCGGAGTGCTGCCGCTCCAC
TGGACGAATACGGCATTATGCTGGATATGCTGGCCAGGTACGAATGGAACCTCTCACGGGTTTCACGAGAACTGGGCATC
AGCCGGCCAACGCTCTACAAGAAGATGAAATGCTACGCCATTGTTCCGCCGCACCCGTTTGAAAGAAAGAAGAAAAATTG
A

Upstream 100 bases:

>100_bases
GGGGAACACCTTGTCCCTGTGAGCGCTGCCGTATGCCGTCGGCGTGCATGTTGCAGTCATGAAGGCAGCATGTTTCGGAT
CACTTTTCCAGGGGGATGGG

Downstream 100 bases:

>100_bases
ATTCTGCACGTTCTTGCAGTAGGCTCCTGTGGCGGAAGTTTCCTTGAAAGGCAAAAGGGAACCAGGCCCCCGCCAGAGGG
TTGACGGCCATCGCTAATTC

Product: Fis family GAF modulated sigma54 specific transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MFEQERSRHRETVCQLACGQHQGIVNHSLRHDVQPHILRSWERCLTRYNLDPSQLEKPIRVGDKALADYREPLEDFLFFA
QSGMRKLYRMLSSVGYVLLLCNAEGVTIDYVGDPKDEREHRRAGLCPGTVWQESLAGTCGVGTCLEERRAVTIHRNEHFF
SPFIGLSCSAAPLYHPDGTLLGALDASLLHSPESKDSQAVALLLVNSHARLIENAYFVRKCRDHWMIRFNKMQAFVEVTT
EQIIAVNADGCIVAANFNAISELGRQGGGTPVNRQLSDIFELRIEELVDNALNRTQMVFAIRAVATGIQYFALFSAPGAR
TVQPARQHGNSDRAAQPKNRPRARLGLNQLAGADPQMRRNATRALRVMNRGIPILLTGETGTGKEVFARAIHESSDRAAK
PFIALNCASIPESLIESELFGYRQGAFTGAHIKGMRGKILQADGGTLFLDEIGDMPLSLQTRLLRVLAEKEVLPLGSESP
VRVDLNVICATLRNLEELVRDGRFREDLYYRLNGITITLPPLREREDRDMLIRNVLLAERQSGDARISQEAFDALTRHSW
PGNIRELHNLIRCALAVSENGIITLDDLPPVKNGGKAVSFLPAASSPRSAAAPLDEYGIMLDMLARYEWNLSRVSRELGI
SRPTLYKKMKCYAIVPPHPFERKKKN

Sequences:

>Translated_666_residues
MFEQERSRHRETVCQLACGQHQGIVNHSLRHDVQPHILRSWERCLTRYNLDPSQLEKPIRVGDKALADYREPLEDFLFFA
QSGMRKLYRMLSSVGYVLLLCNAEGVTIDYVGDPKDEREHRRAGLCPGTVWQESLAGTCGVGTCLEERRAVTIHRNEHFF
SPFIGLSCSAAPLYHPDGTLLGALDASLLHSPESKDSQAVALLLVNSHARLIENAYFVRKCRDHWMIRFNKMQAFVEVTT
EQIIAVNADGCIVAANFNAISELGRQGGGTPVNRQLSDIFELRIEELVDNALNRTQMVFAIRAVATGIQYFALFSAPGAR
TVQPARQHGNSDRAAQPKNRPRARLGLNQLAGADPQMRRNATRALRVMNRGIPILLTGETGTGKEVFARAIHESSDRAAK
PFIALNCASIPESLIESELFGYRQGAFTGAHIKGMRGKILQADGGTLFLDEIGDMPLSLQTRLLRVLAEKEVLPLGSESP
VRVDLNVICATLRNLEELVRDGRFREDLYYRLNGITITLPPLREREDRDMLIRNVLLAERQSGDARISQEAFDALTRHSW
PGNIRELHNLIRCALAVSENGIITLDDLPPVKNGGKAVSFLPAASSPRSAAAPLDEYGIMLDMLARYEWNLSRVSRELGI
SRPTLYKKMKCYAIVPPHPFERKKKN
>Mature_666_residues
MFEQERSRHRETVCQLACGQHQGIVNHSLRHDVQPHILRSWERCLTRYNLDPSQLEKPIRVGDKALADYREPLEDFLFFA
QSGMRKLYRMLSSVGYVLLLCNAEGVTIDYVGDPKDEREHRRAGLCPGTVWQESLAGTCGVGTCLEERRAVTIHRNEHFF
SPFIGLSCSAAPLYHPDGTLLGALDASLLHSPESKDSQAVALLLVNSHARLIENAYFVRKCRDHWMIRFNKMQAFVEVTT
EQIIAVNADGCIVAANFNAISELGRQGGGTPVNRQLSDIFELRIEELVDNALNRTQMVFAIRAVATGIQYFALFSAPGAR
TVQPARQHGNSDRAAQPKNRPRARLGLNQLAGADPQMRRNATRALRVMNRGIPILLTGETGTGKEVFARAIHESSDRAAK
PFIALNCASIPESLIESELFGYRQGAFTGAHIKGMRGKILQADGGTLFLDEIGDMPLSLQTRLLRVLAEKEVLPLGSESP
VRVDLNVICATLRNLEELVRDGRFREDLYYRLNGITITLPPLREREDRDMLIRNVLLAERQSGDARISQEAFDALTRHSW
PGNIRELHNLIRCALAVSENGIITLDDLPPVKNGGKAVSFLPAASSPRSAAAPLDEYGIMLDMLARYEWNLSRVSRELGI
SRPTLYKKMKCYAIVPPHPFERKKKN

Specific function: Required for sigma-54-dependent transcription of acoXABC [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1789233, Length=326, Percent_Identity=45.0920245398773, Blast_Score=248, Evalue=8e-67,
Organism=Escherichia coli, GI1788550, Length=292, Percent_Identity=45.5479452054795, Blast_Score=233, Evalue=4e-62,
Organism=Escherichia coli, GI1790299, Length=228, Percent_Identity=52.6315789473684, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI1790437, Length=335, Percent_Identity=40.2985074626866, Blast_Score=212, Evalue=7e-56,
Organism=Escherichia coli, GI1788905, Length=297, Percent_Identity=42.0875420875421, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI1786524, Length=331, Percent_Identity=40.785498489426, Blast_Score=205, Evalue=8e-54,
Organism=Escherichia coli, GI87082117, Length=216, Percent_Identity=50, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1787583, Length=315, Percent_Identity=36.5079365079365, Blast_Score=192, Evalue=7e-50,
Organism=Escherichia coli, GI1789087, Length=292, Percent_Identity=40.7534246575342, Blast_Score=191, Evalue=1e-49,
Organism=Escherichia coli, GI87082152, Length=235, Percent_Identity=44.6808510638298, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI87081858, Length=634, Percent_Identity=25.7097791798107, Blast_Score=169, Evalue=6e-43,
Organism=Escherichia coli, GI87081872, Length=222, Percent_Identity=40.990990990991, Blast_Score=165, Evalue=8e-42,
Organism=Escherichia coli, GI1789828, Length=226, Percent_Identity=38.9380530973451, Blast_Score=140, Evalue=4e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 74456; Mature: 74456

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEQERSRHRETVCQLACGQHQGIVNHSLRHDVQPHILRSWERCLTRYNLDPSQLEKPIR
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCHHH
VGDKALADYREPLEDFLFFAQSGMRKLYRMLSSVGYVLLLCNAEGVTIDYVGDPKDEREH
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCHHHHH
RRAGLCPGTVWQESLAGTCGVGTCLEERRAVTIHRNEHFFSPFIGLSCSAAPLYHPDGTL
HHCCCCCCHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCCE
LGALDASLLHSPESKDSQAVALLLVNSHARLIENAYFVRKCRDHWMIRFNKMQAFVEVTT
EHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH
EQIIAVNADGCIVAANFNAISELGRQGGGTPVNRQLSDIFELRIEELVDNALNRTQMVFA
HHEEEECCCCEEEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAVATGIQYFALFSAPGARTVQPARQHGNSDRAAQPKNRPRARLGLNQLAGADPQMRRN
HHHHHHHHHHHHEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCHHHHCCCCHHHHHH
ATRALRVMNRGIPILLTGETGTGKEVFARAIHESSDRAAKPFIALNCASIPESLIESELF
HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHH
GYRQGAFTGAHIKGMRGKILQADGGTLFLDEIGDMPLSLQTRLLRVLAEKEVLPLGSESP
HHHCCCCCCCCCCCCCCEEEECCCCEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
VRVDLNVICATLRNLEELVRDGRFREDLYYRLNGITITLPPLREREDRDMLIRNVLLAER
EEEHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCEEEECCCCCCCCHHHHHHHHHHHHHC
QSGDARISQEAFDALTRHSWPGNIRELHNLIRCALAVSENGIITLDDLPPVKNGGKAVSF
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE
LPAASSPRSAAAPLDEYGIMLDMLARYEWNLSRVSRELGISRPTLYKKMKCYAIVPPHPF
ECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCEEEEECCCCCC
ERKKKN
CCCCCC
>Mature Secondary Structure
MFEQERSRHRETVCQLACGQHQGIVNHSLRHDVQPHILRSWERCLTRYNLDPSQLEKPIR
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCHHH
VGDKALADYREPLEDFLFFAQSGMRKLYRMLSSVGYVLLLCNAEGVTIDYVGDPKDEREH
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCHHHHH
RRAGLCPGTVWQESLAGTCGVGTCLEERRAVTIHRNEHFFSPFIGLSCSAAPLYHPDGTL
HHCCCCCCHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCCE
LGALDASLLHSPESKDSQAVALLLVNSHARLIENAYFVRKCRDHWMIRFNKMQAFVEVTT
EHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH
EQIIAVNADGCIVAANFNAISELGRQGGGTPVNRQLSDIFELRIEELVDNALNRTQMVFA
HHEEEECCCCEEEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAVATGIQYFALFSAPGARTVQPARQHGNSDRAAQPKNRPRARLGLNQLAGADPQMRRN
HHHHHHHHHHHHEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCHHHHCCCCHHHHHH
ATRALRVMNRGIPILLTGETGTGKEVFARAIHESSDRAAKPFIALNCASIPESLIESELF
HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHH
GYRQGAFTGAHIKGMRGKILQADGGTLFLDEIGDMPLSLQTRLLRVLAEKEVLPLGSESP
HHHCCCCCCCCCCCCCCEEEECCCCEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
VRVDLNVICATLRNLEELVRDGRFREDLYYRLNGITITLPPLREREDRDMLIRNVLLAER
EEEHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCEEEECCCCCCCCHHHHHHHHHHHHHC
QSGDARISQEAFDALTRHSWPGNIRELHNLIRCALAVSENGIITLDDLPPVKNGGKAVSF
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE
LPAASSPRSAAAPLDEYGIMLDMLARYEWNLSRVSRELGISRPTLYKKMKCYAIVPPHPF
ECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCEEEEECCCCCC
ERKKKN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1378052 [H]