Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is dksA [C]

Identifier: 118581498

GI number: 118581498

Start: 3384764

End: 3385201

Strand: Direct

Name: dksA [C]

Synonym: Ppro_3095

Alternate gene names: 118581498

Gene position: 3384764-3385201 (Clockwise)

Preceding gene: 118581497

Following gene: 118581500

Centisome position: 84.45

GC content: 60.5

Gene sequence:

>438_bases
ATGGCAACAGATCAGGCCAACAAGTGGAATGAAATCAGTGTGATCCTCCATAAAATGAAGGATGACACCCTGCGCGAGAT
ACAGAAGACCCTGAAGAGCGGCACCGACATCCTGACCATCAACGAGCCCAGCGGCGACATCTACGATCAGGCCTCATCGG
AGCGCGACCGCGAACTGGGGCTCTTGCTGGGAGACCGGGAGCGGGAGAAGCTGCACGCCATCGACGAGGCACTGCTGCGC
ATCAGGGAAGGGGAGTACGGCATCTGCGAGGAGTGCGAGGAGGAGATTCCTTTGGGCCGCCTGAAGGCGCTGCCCTTTGC
CCGACACTGCGTCAGGTGCAAGTCCGACCTGGAGAAGCTCCAGGCCCAGACCAAACGCTTCGAGGAGGATCGCGCCTACC
GGGAGATCCCCCTGGGAGGCGATGAGGAAGAATCCTGA

Upstream 100 bases:

>100_bases
TTATCTTGACAAGCAGTTTTTTTTTTGCTAGAAGTGCCGCCTTCAAATGCGGCCCCCGGCCACGTGAATACTGAAGCATA
CCAACATACCGGAGCACGAC

Downstream 100 bases:

>100_bases
CCCCTGCGCCGGTTTCGTAACGCGGCCACCAGCCTCATCAGCACCCCGCGATGCACCTCCATGGCATCCCGGGGGCAGAG
CTCACGACAACACCAGCATC

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: DNAK Suppressor Protein; Transcriptional Regulator TraR/DksA Family; TraR/DksA Family Zinc Finger Transcriptional Regulator

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MATDQANKWNEISVILHKMKDDTLREIQKTLKSGTDILTINEPSGDIYDQASSERDRELGLLLGDREREKLHAIDEALLR
IREGEYGICEECEEEIPLGRLKALPFARHCVRCKSDLEKLQAQTKRFEEDRAYREIPLGGDEEES

Sequences:

>Translated_145_residues
MATDQANKWNEISVILHKMKDDTLREIQKTLKSGTDILTINEPSGDIYDQASSERDRELGLLLGDREREKLHAIDEALLR
IREGEYGICEECEEEIPLGRLKALPFARHCVRCKSDLEKLQAQTKRFEEDRAYREIPLGGDEEES
>Mature_144_residues
ATDQANKWNEISVILHKMKDDTLREIQKTLKSGTDILTINEPSGDIYDQASSERDRELGLLLGDREREKLHAIDEALLRI
REGEYGICEECEEEIPLGRLKALPFARHCVRCKSDLEKLQAQTKRFEEDRAYREIPLGGDEEES

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16716; Mature: 16585

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDQANKWNEISVILHKMKDDTLREIQKTLKSGTDILTINEPSGDIYDQASSERDRELG
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCHHHHH
LLLGDREREKLHAIDEALLRIREGEYGICEECEEEIPLGRLKALPFARHCVRCKSDLEKL
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHH
QAQTKRFEEDRAYREIPLGGDEEES
HHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ATDQANKWNEISVILHKMKDDTLREIQKTLKSGTDILTINEPSGDIYDQASSERDRELG
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCHHHHH
LLLGDREREKLHAIDEALLRIREGEYGICEECEEEIPLGRLKALPFARHCVRCKSDLEKL
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHH
QAQTKRFEEDRAYREIPLGGDEEES
HHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA