| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is purC
Identifier: 118581469
GI number: 118581469
Start: 3356037
End: 3356927
Strand: Direct
Name: purC
Synonym: Ppro_3066
Alternate gene names: 118581469
Gene position: 3356037-3356927 (Clockwise)
Preceding gene: 118581468
Following gene: 118581470
Centisome position: 83.73
GC content: 61.84
Gene sequence:
>891_bases ATGTCACACCCCGTCATGCACACCGATTTTCCCGGGCTGAAACTTTTGGCCCGCGGCAAGGTGCGAGACATCTACGACCT GGGAGAAACGCTGCTGCTGGTCACCTCCGACCGGATCTCGGCTTTTGACGTCATCATGAACGAACCGATACCGGACAAGG GCTTTGTCTTGACCGAGATATCGTCCTTCTGGTTCCGACAGATGGAAGACATCGTCAGCAACCACATCATATCCACCGAC GTGGACGAATTCCCGGCCGCCTGCCGTCCCCATGCCGACCTGCTCAGGGGCCGCTCCATGCTGGTGAAAAAGGCGCGCCC CCTGCCGGTGGAGTGCATCGTGCGCGGCTACGTCTCCGGTTCCGGCTGGAAAGAGTATCAGAGCAGCGGCAGCATCTGCG GCATTTCGCTTCCCCCTGGCCTGAGGGAGTCGGACCGCCTGCCGGAGCCGATCTTCACCCCCTCCACCAAGGCCGAACTG GGCACCCATGACGAGAACATCTCCTTCGAGCGGATGACTGAACTGTGCGGCCGCGAACTGGCCGAACAGGCCCGCGACTA CACCCTGAAGATATACGGCCGCGCCCGCGAACTGGCCGACCAGAAGGGGATCATCATCGCCGACACCAAGTTCGAATTCG GCGTCTTCGAGGGGGAGTTGATCATCATCGACGAATGCATGACCCCCGATTCCAGCCGTTTCTGGCTGAAGGACGACTAC CGGCCGGGCGGGCCGCAGCCCAGCTTTGACAAGCAGTTCCTGCGCGATTATCTGGAGGGACTGGACTGGAACAAGACAGC CCCGGCGCCGGCGCTCCCGGCGGAGATCATCGCCAAGACCGCCCAGATGTACCGCGAGGCGCTCTCCCGCATCACCGGCA TCTCTCTGTAA
Upstream 100 bases:
>100_bases AAACAGCAGGAGGCTCTCACAACCTGGGTGAAACAGTTGCGAGGCAAGGCAAAGATCGAAATCAATCAGGCACTCGTCGC CGACTAAACAGGAGAAACAT
Downstream 100 bases:
>100_bases GAGCGTGTTCATGCAGCAAAAAAAGGCGAATCCCCCTGGGGTTTCGCCTTTTTTTGTGCCTCGTTCCCTTCCTGGCCACA CTGGCGCTTCACCAATCCTG
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSHPVMHTDFPGLKLLARGKVRDIYDLGETLLLVTSDRISAFDVIMNEPIPDKGFVLTEISSFWFRQMEDIVSNHIISTD VDEFPAACRPHADLLRGRSMLVKKARPLPVECIVRGYVSGSGWKEYQSSGSICGISLPPGLRESDRLPEPIFTPSTKAEL GTHDENISFERMTELCGRELAEQARDYTLKIYGRARELADQKGIIIADTKFEFGVFEGELIIIDECMTPDSSRFWLKDDY RPGGPQPSFDKQFLRDYLEGLDWNKTAPAPALPAEIIAKTAQMYREALSRITGISL
Sequences:
>Translated_296_residues MSHPVMHTDFPGLKLLARGKVRDIYDLGETLLLVTSDRISAFDVIMNEPIPDKGFVLTEISSFWFRQMEDIVSNHIISTD VDEFPAACRPHADLLRGRSMLVKKARPLPVECIVRGYVSGSGWKEYQSSGSICGISLPPGLRESDRLPEPIFTPSTKAEL GTHDENISFERMTELCGRELAEQARDYTLKIYGRARELADQKGIIIADTKFEFGVFEGELIIIDECMTPDSSRFWLKDDY RPGGPQPSFDKQFLRDYLEGLDWNKTAPAPALPAEIIAKTAQMYREALSRITGISL >Mature_295_residues SHPVMHTDFPGLKLLARGKVRDIYDLGETLLLVTSDRISAFDVIMNEPIPDKGFVLTEISSFWFRQMEDIVSNHIISTDV DEFPAACRPHADLLRGRSMLVKKARPLPVECIVRGYVSGSGWKEYQSSGSICGISLPPGLRESDRLPEPIFTPSTKAELG THDENISFERMTELCGRELAEQARDYTLKIYGRARELADQKGIIIADTKFEFGVFEGELIIIDECMTPDSSRFWLKDDYR PGGPQPSFDKQFLRDYLEGLDWNKTAPAPALPAEIIAKTAQMYREALSRITGISL
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Escherichia coli, GI1788820, Length=253, Percent_Identity=30.4347826086957, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6319326, Length=300, Percent_Identity=47.3333333333333, Blast_Score=271, Evalue=8e-74,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): PUR7_PELPD (A1ATJ1)
Other databases:
- EMBL: CP000482 - RefSeq: YP_902719.1 - ProteinModelPortal: A1ATJ1 - SMR: A1ATJ1 - STRING: A1ATJ1 - GeneID: 4574111 - GenomeReviews: CP000482_GR - KEGG: ppd:Ppro_3066 - eggNOG: COG0152 - HOGENOM: HBG555040 - OMA: LTLMDEV - PhylomeDB: A1ATJ1 - ProtClustDB: PRK13961 - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR00081
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 33306; Mature: 33175
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPVMHTDFPGLKLLARGKVRDIYDLGETLLLVTSDRISAFDVIMNEPIPDKGFVLTEI CCCCCCCCCCCCCEEECCCCHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCEEHHHH SSFWFRQMEDIVSNHIISTDVDEFPAACRPHADLLRGRSMLVKKARPLPVECIVRGYVSG HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC SGWKEYQSSGSICGISLPPGLRESDRLPEPIFTPSTKAELGTHDENISFERMTELCGREL CCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AEQARDYTLKIYGRARELADQKGIIIADTKFEFGVFEGELIIIDECMTPDSSRFWLKDDY HHHHHCEEEEEEECHHHHHCCCCEEEEECCEECEEECCCEEEEECCCCCCCCCEEEECCC RPGGPQPSFDKQFLRDYLEGLDWNKTAPAPALPAEIIAKTAQMYREALSRITGISL CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SHPVMHTDFPGLKLLARGKVRDIYDLGETLLLVTSDRISAFDVIMNEPIPDKGFVLTEI CCCCCCCCCCCCEEECCCCHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCEEHHHH SSFWFRQMEDIVSNHIISTDVDEFPAACRPHADLLRGRSMLVKKARPLPVECIVRGYVSG HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC SGWKEYQSSGSICGISLPPGLRESDRLPEPIFTPSTKAELGTHDENISFERMTELCGREL CCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AEQARDYTLKIYGRARELADQKGIIIADTKFEFGVFEGELIIIDECMTPDSSRFWLKDDY HHHHHCEEEEEEECHHHHHCCCCEEEEECCEECEEECCCEEEEECCCCCCCCCEEEECCC RPGGPQPSFDKQFLRDYLEGLDWNKTAPAPALPAEIIAKTAQMYREALSRITGISL CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA