| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is hisB
Identifier: 118581445
GI number: 118581445
Start: 3321888
End: 3322475
Strand: Reverse
Name: hisB
Synonym: Ppro_3040
Alternate gene names: 118581445
Gene position: 3322475-3321888 (Counterclockwise)
Preceding gene: 118581446
Following gene: 118581444
Centisome position: 82.9
GC content: 60.2
Gene sequence:
>588_bases ATGACTCGAACGGCGACCATTGAACGGAATACCAGTGAAACCAGGATACGGCTCACCCTGAATATCGACGGCAGGGGGGA GACATCCATCGGCAGTGGGGTCCCCTTCCTCGACCACATGCTCAACCTCTTCGCCCGCCACGGGCTCTTCGACCTGAGCC TGGAGGCGTGTGGCGACACCCAGATCGACTTCCACCATACGGTGGAGGATATCGGCATCGTGCTGGGAGAGGCCTTCAAG CAGGCCCTGGCCGACAAGCAGGGGATCAACCGCTATGGGCAGGTCACGGTCCCCATGGACGAGACCCTGGCAAGCGCGGT TGTGGATATCTCCGGCCGCCCCTACCTGGTCTATAACGTCGACCTCCCCAAGGCCAAGGTCGGGGATTTCGATGTTGAGC TGGCACAGGAATTCTTCCAGGCCTTTGCCAACCACTGTGGCATAAACCTGCACATCAACCTGCTGTACGGCGACAATCTG CACCACATCATTGAAGCCTGCTTCAAGGCGGTCGGTCGGGCCATGGATATGGCCACCCGCCTGGACCCGCGGGTAGAAGG TGTCATGTCCACCAAGGGGGTCCTGTAG
Upstream 100 bases:
>100_bases TCCTGGCCCATGGCCTGAGGATTTCCATCGGCACCCGCCAGGAGATGGAACTGACCCTGGCCGCGCTTGCGGAAATTGCC TAAGATCCCCGGGAGGAACG
Downstream 100 bases:
>100_bases CGCTCCCCACAATCCAGCGAAAAAAGGGCGATCCGTTCAAGGACGCCCTTTTTTTGTTGTGCCATGTGATGGAAGGATGA ACGACGGAAGAGGAGGTGGG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTRTATIERNTSETRIRLTLNIDGRGETSIGSGVPFLDHMLNLFARHGLFDLSLEACGDTQIDFHHTVEDIGIVLGEAFK QALADKQGINRYGQVTVPMDETLASAVVDISGRPYLVYNVDLPKAKVGDFDVELAQEFFQAFANHCGINLHINLLYGDNL HHIIEACFKAVGRAMDMATRLDPRVEGVMSTKGVL
Sequences:
>Translated_195_residues MTRTATIERNTSETRIRLTLNIDGRGETSIGSGVPFLDHMLNLFARHGLFDLSLEACGDTQIDFHHTVEDIGIVLGEAFK QALADKQGINRYGQVTVPMDETLASAVVDISGRPYLVYNVDLPKAKVGDFDVELAQEFFQAFANHCGINLHINLLYGDNL HHIIEACFKAVGRAMDMATRLDPRVEGVMSTKGVL >Mature_194_residues TRTATIERNTSETRIRLTLNIDGRGETSIGSGVPFLDHMLNLFARHGLFDLSLEACGDTQIDFHHTVEDIGIVLGEAFKQ ALADKQGINRYGQVTVPMDETLASAVVDISGRPYLVYNVDLPKAKVGDFDVELAQEFFQAFANHCGINLHINLLYGDNLH HIIEACFKAVGRAMDMATRLDPRVEGVMSTKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=195, Percent_Identity=46.1538461538462, Blast_Score=161, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6324776, Length=217, Percent_Identity=38.2488479262673, Blast_Score=146, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_PELPD (A1ATG7)
Other databases:
- EMBL: CP000482 - RefSeq: YP_902695.1 - ProteinModelPortal: A1ATG7 - SMR: A1ATG7 - STRING: A1ATG7 - GeneID: 4574295 - GenomeReviews: CP000482_GR - KEGG: ppd:Ppro_3040 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - PhylomeDB: A1ATG7 - ProtClustDB: PRK00951 - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 21504; Mature: 21373
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTATIERNTSETRIRLTLNIDGRGETSIGSGVPFLDHMLNLFARHGLFDLSLEACGDT CCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEHCCCCCC QIDFHHTVEDIGIVLGEAFKQALADKQGINRYGQVTVPMDETLASAVVDISGRPYLVYNV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCCEEEEEEC DLPKAKVGDFDVELAQEFFQAFANHCGINLHINLLYGDNLHHIIEACFKAVGRAMDMATR CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH LDPRVEGVMSTKGVL CCCHHHHHHHCCCCC >Mature Secondary Structure TRTATIERNTSETRIRLTLNIDGRGETSIGSGVPFLDHMLNLFARHGLFDLSLEACGDT CCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEHCCCCCC QIDFHHTVEDIGIVLGEAFKQALADKQGINRYGQVTVPMDETLASAVVDISGRPYLVYNV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCCEEEEEEC DLPKAKVGDFDVELAQEFFQAFANHCGINLHINLLYGDNLHHIIEACFKAVGRAMDMATR CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH LDPRVEGVMSTKGVL CCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA