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The map label for this gene is omp85 [H]

Identifier: 118581422

GI number: 118581422

Start: 3296475

End: 3298766

Strand: Direct

Name: omp85 [H]

Synonym: Ppro_3017

Alternate gene names: 118581422

Gene position: 3296475-3298766 (Clockwise)

Preceding gene: 118581421

Following gene: 118581423

Centisome position: 82.25

GC content: 58.55

Gene sequence:

>2292_bases
TTGCCCATATCATCACGCTTACTCATGGCTGCGGTAGTCCTGCAGCTGGCCCTGTCGGAGTCGGCTTACGCCGAAGGCGA
GACCATCGCCGAAATATCCGTCAGGGGCAACCGGCGCATCGAGGCGTCGGTCATTCAGAACGCCATCAAGCTGAAGGTCG
GCGACACGCTCTACAGCGACAAGACCGATGCCGACCTGCGCGCCATACACAAGCTGGGGCACTTCCAGGAGGTGCTGGTC
TCCACCGAGGAAACATCCAAGGGAACAGTGCTGATCTACACCGTGCAGGAAAAGCCGGTCATCCGCGACATCAGGTTCGA
GGGAAACAAGGAACTCTCCAGCGAAAAGCTCACCAAGGACGGGCTGGATCTGCGGCGGGACACCATCTTTTCCGTCAAGG
ACCTGAGCAGGAGCGTGGAAAAGATCAGGAAGCTCTACCAGGACGAGGGGTATTACCTGGTGGAGGTAACTCCGCGTACC
AGGATGCGCTCCCCCTCTGAAATGTCGGTCACCTTCCAGGTCGTCGAGAACCAGAAGGTCCTGATCAGCTCGATCACCTT
CGACGGCAACCGGTTCTTCAGCAACCGCAAACTGCGCAGTTTCATGGAAACCAAGCAGAAGTGGTTCCTCTCCTGGCTGA
CCAACGCCGGCACCTACCGGGACGAAGTGCTGAGAAACGACGCGCTGATCATCGCCGACCAGTACCAGAACAACGGCTAC
CTGAACGTCAAGGTGGGCGAACCGGTGGTCAAGCTGAACGAGGCCAAGAATTCCCTGGAGGTCCTGATCGGCATCACCGA
AGGGGAGCAGTACCGCATCGGCGACATCGAGTTCGCCGGAGACCTGCTGGAGCCGGTCTCCACCATGCGCGCAAAGCTGA
AATCGGAGCCGGGCGCCATTTTCAGCCGCGCCAACGTCCGCGCCGACATCATCACCCTGACCGACCTGTACGGCGACAAG
GGGTACGCCTTCACCAACGTCACGCCGCTGACCAAGCCGTTGCCGGAGAGCAAATCAGTCAACCTGACCTTCGACATGGA
GAAGGGGGAACTGGTCCACATCGAGCGCATCGCCATCTCCGGCAACACCAAGAGCCGCGACAAGGTGGTCCGCCGCGAAA
TGAGGGTCACCGAATCCGGCCTCTTCAGCGCCACCGGCATGAAACGCAGCAAGCAGAACCTGATGAACACCGGCTATTTC
GAAGAGGCCAACATCTCCACCTCCAAGGGGAGCAGCGGCAACCTGCTCAACGTCAGCGTGGACGTCAAGGAGAAATCCAC
CGGCAGCTTCAGCATCGGCGGCGGCTACAGCTCCCTTGACGGCATTATCGGACAGGGTTCCGTCTCCCAGACCAATTTCC
TGGGACTGGGACTCAAAGCCAATTTCTCCGCCTCCCTGGGGGGCAGCTCCTCGACCTTTGCCATCGGCCTGACCGACCCC
TATTTCCGCGACACGAAATGGACCTTGGGCGCCGACATCTACCGCTCCGAGCGCGACTACCTGGATTACACCCGCCGGGT
CACCGGCGGCGACATAAAGGCCGGCTATCCCATCAACGACTTCGTCAGCACCTTCTTCATGTACAAGTACGAGATCAAGA
AACTCTTCGATCCGGAAGATGCCTACGAAAAATACAATGAAATAGATCCGGACAACTTTCCGCTGGACACGACGTCTACC
AGTTCCATCATGGCCAGCATCAGCCACAACAACACCGATTACCGCATCGATCCCAGTACCGGTTTCGTCAACAACCTGTC
AGCCGAGTATGCAGGTCTGGGGGGTGACAACCGCTTCGCCAAGTTCACCACCGACCACACCTGGTTTCACCCGCTCTACA
AGAAGCTGATCTTCTCCACCAAACTGAGCCTGGGCTACATCCAGGAGGTTGGCAAGGATATCCCCATCGACGACAAGTTC
TACCTGGGGGGCATCTACTCGCTGCGCGGCTACAAATCCCGCACGGTCTGCCCCACGAAAACCATAACCGTGGACGGCGA
CGAGGACCGGGTCTACATGGGCGGCAGCAAGGAGTTCTTCGGCAATACGGAGCTGACCTTCCCGATCCTGTCCGAATCCG
GCTTCAAGGGAGTGGTATTCTTCGACTACGGCAACTCCGACGACAAGACTAGCAAGCTGTTCAACAACATACTGATGAGC
TATGGCGCAGGCATCCGCTGGGCATCCCCCCTGGGCCCGCTGCGCCTTGAGTACGGCATACCGATCAACCCCCGCGAGGA
CATAGACAAGAAAAGCGGGCGATTCGAGTTTTCCATCGGCGGCATGTTCTAG

Upstream 100 bases:

>100_bases
ACAACGAGCGCCTGGCCGCTGCCATGGGCCGCACCGTGCACCTGACGGATGGAAAACTGGAATTGACTTCAATTTAATTT
GAATCCATAGCGAGGAAACT

Downstream 100 bases:

>100_bases
GACAGGCGTCGCTACGACCAGCAGGCAAAGAGACAACCACCACCGGCATCCCGATCAGCGGGGCCGAACATATGCGCATA
AAAAAGGAGACTGCTGTATG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 763; Mature: 762

Protein sequence:

>763_residues
MPISSRLLMAAVVLQLALSESAYAEGETIAEISVRGNRRIEASVIQNAIKLKVGDTLYSDKTDADLRAIHKLGHFQEVLV
STEETSKGTVLIYTVQEKPVIRDIRFEGNKELSSEKLTKDGLDLRRDTIFSVKDLSRSVEKIRKLYQDEGYYLVEVTPRT
RMRSPSEMSVTFQVVENQKVLISSITFDGNRFFSNRKLRSFMETKQKWFLSWLTNAGTYRDEVLRNDALIIADQYQNNGY
LNVKVGEPVVKLNEAKNSLEVLIGITEGEQYRIGDIEFAGDLLEPVSTMRAKLKSEPGAIFSRANVRADIITLTDLYGDK
GYAFTNVTPLTKPLPESKSVNLTFDMEKGELVHIERIAISGNTKSRDKVVRREMRVTESGLFSATGMKRSKQNLMNTGYF
EEANISTSKGSSGNLLNVSVDVKEKSTGSFSIGGGYSSLDGIIGQGSVSQTNFLGLGLKANFSASLGGSSSTFAIGLTDP
YFRDTKWTLGADIYRSERDYLDYTRRVTGGDIKAGYPINDFVSTFFMYKYEIKKLFDPEDAYEKYNEIDPDNFPLDTTST
SSIMASISHNNTDYRIDPSTGFVNNLSAEYAGLGGDNRFAKFTTDHTWFHPLYKKLIFSTKLSLGYIQEVGKDIPIDDKF
YLGGIYSLRGYKSRTVCPTKTITVDGDEDRVYMGGSKEFFGNTELTFPILSESGFKGVVFFDYGNSDDKTSKLFNNILMS
YGAGIRWASPLGPLRLEYGIPINPREDIDKKSGRFEFSIGGMF

Sequences:

>Translated_763_residues
MPISSRLLMAAVVLQLALSESAYAEGETIAEISVRGNRRIEASVIQNAIKLKVGDTLYSDKTDADLRAIHKLGHFQEVLV
STEETSKGTVLIYTVQEKPVIRDIRFEGNKELSSEKLTKDGLDLRRDTIFSVKDLSRSVEKIRKLYQDEGYYLVEVTPRT
RMRSPSEMSVTFQVVENQKVLISSITFDGNRFFSNRKLRSFMETKQKWFLSWLTNAGTYRDEVLRNDALIIADQYQNNGY
LNVKVGEPVVKLNEAKNSLEVLIGITEGEQYRIGDIEFAGDLLEPVSTMRAKLKSEPGAIFSRANVRADIITLTDLYGDK
GYAFTNVTPLTKPLPESKSVNLTFDMEKGELVHIERIAISGNTKSRDKVVRREMRVTESGLFSATGMKRSKQNLMNTGYF
EEANISTSKGSSGNLLNVSVDVKEKSTGSFSIGGGYSSLDGIIGQGSVSQTNFLGLGLKANFSASLGGSSSTFAIGLTDP
YFRDTKWTLGADIYRSERDYLDYTRRVTGGDIKAGYPINDFVSTFFMYKYEIKKLFDPEDAYEKYNEIDPDNFPLDTTST
SSIMASISHNNTDYRIDPSTGFVNNLSAEYAGLGGDNRFAKFTTDHTWFHPLYKKLIFSTKLSLGYIQEVGKDIPIDDKF
YLGGIYSLRGYKSRTVCPTKTITVDGDEDRVYMGGSKEFFGNTELTFPILSESGFKGVVFFDYGNSDDKTSKLFNNILMS
YGAGIRWASPLGPLRLEYGIPINPREDIDKKSGRFEFSIGGMF
>Mature_762_residues
PISSRLLMAAVVLQLALSESAYAEGETIAEISVRGNRRIEASVIQNAIKLKVGDTLYSDKTDADLRAIHKLGHFQEVLVS
TEETSKGTVLIYTVQEKPVIRDIRFEGNKELSSEKLTKDGLDLRRDTIFSVKDLSRSVEKIRKLYQDEGYYLVEVTPRTR
MRSPSEMSVTFQVVENQKVLISSITFDGNRFFSNRKLRSFMETKQKWFLSWLTNAGTYRDEVLRNDALIIADQYQNNGYL
NVKVGEPVVKLNEAKNSLEVLIGITEGEQYRIGDIEFAGDLLEPVSTMRAKLKSEPGAIFSRANVRADIITLTDLYGDKG
YAFTNVTPLTKPLPESKSVNLTFDMEKGELVHIERIAISGNTKSRDKVVRREMRVTESGLFSATGMKRSKQNLMNTGYFE
EANISTSKGSSGNLLNVSVDVKEKSTGSFSIGGGYSSLDGIIGQGSVSQTNFLGLGLKANFSASLGGSSSTFAIGLTDPY
FRDTKWTLGADIYRSERDYLDYTRRVTGGDIKAGYPINDFVSTFFMYKYEIKKLFDPEDAYEKYNEIDPDNFPLDTTSTS
SIMASISHNNTDYRIDPSTGFVNNLSAEYAGLGGDNRFAKFTTDHTWFHPLYKKLIFSTKLSLGYIQEVGKDIPIDDKFY
LGGIYSLRGYKSRTVCPTKTITVDGDEDRVYMGGSKEFFGNTELTFPILSESGFKGVVFFDYGNSDDKTSKLFNNILMSY
GAGIRWASPLGPLRLEYGIPINPREDIDKKSGRFEFSIGGMF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=832, Percent_Identity=26.6826923076923, Blast_Score=233, Evalue=3e-62,
Organism=Escherichia coli, GI1790666, Length=186, Percent_Identity=29.5698924731183, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 85359; Mature: 85228

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISSRLLMAAVVLQLALSESAYAEGETIAEISVRGNRRIEASVIQNAIKLKVGDTLYSD
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHEEEECCEECCC
KTDADLRAIHKLGHFQEVLVSTEETSKGTVLIYTVQEKPVIRDIRFEGNKELSSEKLTKD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHC
GLDLRRDTIFSVKDLSRSVEKIRKLYQDEGYYLVEVTPRTRMRSPSEMSVTFQVVENQKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCEEEEEEECCCEE
LISSITFDGNRFFSNRKLRSFMETKQKWFLSWLTNAGTYRDEVLRNDALIIADQYQNNGY
EEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEEECCCCE
LNVKVGEPVVKLNEAKNSLEVLIGITEGEQYRIGDIEFAGDLLEPVSTMRAKLKSEPGAI
EEEEECCCEEEECCCCCCEEEEEEECCCCEEEECCEEHHHHHHHHHHHHHHHHCCCCCCE
FSRANVRADIITLTDLYGDKGYAFTNVTPLTKPLPESKSVNLTFDMEKGELVHIERIAIS
EECCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEE
GNTKSRDKVVRREMRVTESGLFSATGMKRSKQNLMNTGYFEEANISTSKGSSGNLLNVSV
CCCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
DVKEKSTGSFSIGGGYSSLDGIIGQGSVSQTNFLGLGLKANFSASLGGSSSTFAIGLTDP
EEECCCCCCEEECCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC
YFRDTKWTLGADIYRSERDYLDYTRRVTGGDIKAGYPINDFVSTFFMYKYEIKKLFDPED
CCCCCCEEECCHHHHCCHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHH
AYEKYNEIDPDNFPLDTTSTSSIMASISHNNTDYRIDPSTGFVNNLSAEYAGLGGDNRFA
HHHHHCCCCCCCCCCCCCCCHHEEEEEECCCCCEEECCCCCCHHCCCHHHCCCCCCCCEE
KFTTDHTWFHPLYKKLIFSTKLSLGYIQEVGKDIPIDDKFYLGGIYSLRGYKSRTVCPTK
EEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCCCCCE
TITVDGDEDRVYMGGSKEFFGNTELTFPILSESGFKGVVFFDYGNSDDKTSKLFNNILMS
EEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHH
YGAGIRWASPLGPLRLEYGIPINPREDIDKKSGRFEFSIGGMF
HCCCCEECCCCCCEEEEECCCCCCHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure 
PISSRLLMAAVVLQLALSESAYAEGETIAEISVRGNRRIEASVIQNAIKLKVGDTLYSD
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHEEEECCEECCC
KTDADLRAIHKLGHFQEVLVSTEETSKGTVLIYTVQEKPVIRDIRFEGNKELSSEKLTKD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHC
GLDLRRDTIFSVKDLSRSVEKIRKLYQDEGYYLVEVTPRTRMRSPSEMSVTFQVVENQKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCEEEEEEECCCEE
LISSITFDGNRFFSNRKLRSFMETKQKWFLSWLTNAGTYRDEVLRNDALIIADQYQNNGY
EEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEEECCCCE
LNVKVGEPVVKLNEAKNSLEVLIGITEGEQYRIGDIEFAGDLLEPVSTMRAKLKSEPGAI
EEEEECCCEEEECCCCCCEEEEEEECCCCEEEECCEEHHHHHHHHHHHHHHHHCCCCCCE
FSRANVRADIITLTDLYGDKGYAFTNVTPLTKPLPESKSVNLTFDMEKGELVHIERIAIS
EECCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEE
GNTKSRDKVVRREMRVTESGLFSATGMKRSKQNLMNTGYFEEANISTSKGSSGNLLNVSV
CCCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
DVKEKSTGSFSIGGGYSSLDGIIGQGSVSQTNFLGLGLKANFSASLGGSSSTFAIGLTDP
EEECCCCCCEEECCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC
YFRDTKWTLGADIYRSERDYLDYTRRVTGGDIKAGYPINDFVSTFFMYKYEIKKLFDPED
CCCCCCEEECCHHHHCCHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHH
AYEKYNEIDPDNFPLDTTSTSSIMASISHNNTDYRIDPSTGFVNNLSAEYAGLGGDNRFA
HHHHHCCCCCCCCCCCCCCCHHEEEEEECCCCCEEECCCCCCHHCCCHHHCCCCCCCCEE
KFTTDHTWFHPLYKKLIFSTKLSLGYIQEVGKDIPIDDKFYLGGIYSLRGYKSRTVCPTK
EEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCCCCCE
TITVDGDEDRVYMGGSKEFFGNTELTFPILSESGFKGVVFFDYGNSDDKTSKLFNNILMS
EEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHH
YGAGIRWASPLGPLRLEYGIPINPREDIDKKSGRFEFSIGGMF
HCCCCEECCCCCCEEEEECCCCCCHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]