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The map label for this gene is pdtaS [H]

Identifier: 118581415

GI number: 118581415

Start: 3286260

End: 3287726

Strand: Reverse

Name: pdtaS [H]

Synonym: Ppro_3010

Alternate gene names: 118581415

Gene position: 3287726-3286260 (Counterclockwise)

Preceding gene: 118581416

Following gene: 118581414

Centisome position: 82.03

GC content: 61.35

Gene sequence:

>1467_bases
ATGGAGAAGAAGAAACTGCTCAGCGTCCTGATCGCCGAAGACAACGAGGATGACGCCATACTCGTGGCGCGCAGCCTGCG
TCGCTCGGGCTATGAGCTGATCTACGAGCGTGTCGATACGCCGCAGGGGATGGGGGAGGCGCTTGACCGAAAGCCTTGGG
ATATCATCCTCGTGGACTACCGCATGCCCGGCTTTGGCGGGCTGGATGCCCTGAATATCGTCCGGGAGAGAAACCTGGAC
ATTCCGGTCATCCTCGTCTCCGGGGTCATTCTCGAAGACGTGGCCATCGAAGCCATGCGCCAAGGGGCCTGCGACTGTAT
CAAGAAAGATCATCTCGACCGCCTCTCTCCGGCCGTTGAACGGGAACTGGCGGCGGCGGCGGAGCGGCGGGAGCGGCGCC
AGGCCGAGCAGGCCCTGCGGGAGAGCGAGGAACAGTTCCGGGTCCTGGCCGAGACGTCTCCGGCGGCGATCGTCCTTTTC
CAAGGGGAAAACATCGTCTATGTCAACCCATCGGCCGAGCGGCTGACCGGATACACGGAAGAAGAGCTCCTGGGCATGAG
GTACGGGGAGTGGATACATGACGATTTCAAGAACCTGGTGAGGGAATGGGTGCTGGTGCGGCAGCAGGAACCGCTGGCGC
TCGCGGAGTATGAGTTGCGCTATGTGACCAAGGGGGGCGAGGAGCGTTGGGCGCTGTTCTCCGCCGGCCGCATCGACTAC
AAGGGGAAGCCTGCCGGCATAGCCACCATCTTCGACATAACTGGCCGCAAGCGGGCCGAGGAGCAGTTGCGGGATTCGCT
CCGCGAGAAGGAGATCCTGCTCCACGAGATCCATCACCGGGTGAAGAACAACCTGCAGATCGTCTCCACCCTGCTCGATC
TGCAATCCGACTACATCGATGACGAACAGTCACTGAGGTACTTCCAGGAAAGCCAGGACCGGATCAACTCCATGGCCCTG
GTTCATGAGGCGCTGTATCGTTCCAGGGATCTGGCCCGGATCGACTTCACCGTGTACCTGGAGGGGCTTACTGACCACCT
GTTCAAGTCCTATGTCGTCGATCCGAAGCGGATTTCCCTGAAATGCGCTATCGCCAAGGTCACGCTGGGCATCGACGAGG
CGATCCCCTGCGGTCTGATCGTCAACGAGCTGGTCTCCAACTCCCTGAAACATGCTTTTCCCCAAGGGAGACACGGCGAG
ATCCTGGTTCAGTGCCAGAGCGCCGAAGATGGCCTGATCCGTCTCCGTGTCTCGGATAACGGCGTAGGCCTCCCCCCTGA
CCTGGATTTCATGGCGACCAAGACCCTGGGGCTGCAGTTGGTGACCATGCTGGTCAGGCAGGTGCGGGGAGAACTGACGG
TCCAGGGGGAGGTCGCTGGTGGGACGGCATTCACCATCAGTTTCCGGGGGATGCAGCAGGGGGGAGGGGTGGTTCAGGTC
GCGGATGACGCGAAGCGGACATCCTGA

Upstream 100 bases:

>100_bases
TCCGCAAACCGGTGGATTTCGACCAGTTCGCCGAATCGATCAAGCAGTTGGGGATGTACTGGCTCGTGCTCAATGAGCCG
CCACCGTAGGAGGCGCCTCC

Downstream 100 bases:

>100_bases
AGGACGGTGCCATGACTGAGCAGGAAAGCCAGAGCGTGATCGACCGTTTGACCGAGGCGCTGCGGAAAGCCAGGGAGGGA
GACTGTACCCTGCTCCTGGA

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MEKKKLLSVLIAEDNEDDAILVARSLRRSGYELIYERVDTPQGMGEALDRKPWDIILVDYRMPGFGGLDALNIVRERNLD
IPVILVSGVILEDVAIEAMRQGACDCIKKDHLDRLSPAVERELAAAAERRERRQAEQALRESEEQFRVLAETSPAAIVLF
QGENIVYVNPSAERLTGYTEEELLGMRYGEWIHDDFKNLVREWVLVRQQEPLALAEYELRYVTKGGEERWALFSAGRIDY
KGKPAGIATIFDITGRKRAEEQLRDSLREKEILLHEIHHRVKNNLQIVSTLLDLQSDYIDDEQSLRYFQESQDRINSMAL
VHEALYRSRDLARIDFTVYLEGLTDHLFKSYVVDPKRISLKCAIAKVTLGIDEAIPCGLIVNELVSNSLKHAFPQGRHGE
ILVQCQSAEDGLIRLRVSDNGVGLPPDLDFMATKTLGLQLVTMLVRQVRGELTVQGEVAGGTAFTISFRGMQQGGGVVQV
ADDAKRTS

Sequences:

>Translated_488_residues
MEKKKLLSVLIAEDNEDDAILVARSLRRSGYELIYERVDTPQGMGEALDRKPWDIILVDYRMPGFGGLDALNIVRERNLD
IPVILVSGVILEDVAIEAMRQGACDCIKKDHLDRLSPAVERELAAAAERRERRQAEQALRESEEQFRVLAETSPAAIVLF
QGENIVYVNPSAERLTGYTEEELLGMRYGEWIHDDFKNLVREWVLVRQQEPLALAEYELRYVTKGGEERWALFSAGRIDY
KGKPAGIATIFDITGRKRAEEQLRDSLREKEILLHEIHHRVKNNLQIVSTLLDLQSDYIDDEQSLRYFQESQDRINSMAL
VHEALYRSRDLARIDFTVYLEGLTDHLFKSYVVDPKRISLKCAIAKVTLGIDEAIPCGLIVNELVSNSLKHAFPQGRHGE
ILVQCQSAEDGLIRLRVSDNGVGLPPDLDFMATKTLGLQLVTMLVRQVRGELTVQGEVAGGTAFTISFRGMQQGGGVVQV
ADDAKRTS
>Mature_488_residues
MEKKKLLSVLIAEDNEDDAILVARSLRRSGYELIYERVDTPQGMGEALDRKPWDIILVDYRMPGFGGLDALNIVRERNLD
IPVILVSGVILEDVAIEAMRQGACDCIKKDHLDRLSPAVERELAAAAERRERRQAEQALRESEEQFRVLAETSPAAIVLF
QGENIVYVNPSAERLTGYTEEELLGMRYGEWIHDDFKNLVREWVLVRQQEPLALAEYELRYVTKGGEERWALFSAGRIDY
KGKPAGIATIFDITGRKRAEEQLRDSLREKEILLHEIHHRVKNNLQIVSTLLDLQSDYIDDEQSLRYFQESQDRINSMAL
VHEALYRSRDLARIDFTVYLEGLTDHLFKSYVVDPKRISLKCAIAKVTLGIDEAIPCGLIVNELVSNSLKHAFPQGRHGE
ILVQCQSAEDGLIRLRVSDNGVGLPPDLDFMATKTLGLQLVTMLVRQVRGELTVQGEVAGGTAFTISFRGMQQGGGVVQV
ADDAKRTS

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 55045; Mature: 55045

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKKLLSVLIAEDNEDDAILVARSLRRSGYELIYERVDTPQGMGEALDRKPWDIILVDY
CCHHHEEEHEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEE
RMPGFGGLDALNIVRERNLDIPVILVSGVILEDVAIEAMRQGACDCIKKDHLDRLSPAVE
ECCCCCCHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RELAAAAERRERRQAEQALRESEEQFRVLAETSPAAIVLFQGENIVYVNPSAERLTGYTE
HHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCEEEEEEECCEEEEECCCHHHHCCCCH
EELLGMRYGEWIHDDFKNLVREWVLVRQQEPLALAEYELRYVTKGGEERWALFSAGRIDY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCEEEEECCCCCC
KGKPAGIATIFDITGRKRAEEQLRDSLREKEILLHEIHHRVKNNLQIVSTLLDLQSDYID
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
DEQSLRYFQESQDRINSMALVHEALYRSRDLARIDFTVYLEGLTDHLFKSYVVDPKRISL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHCCCCCCEEE
KCAIAKVTLGIDEAIPCGLIVNELVSNSLKHAFPQGRHGEILVQCQSAEDGLIRLRVSDN
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCC
GVGLPPDLDFMATKTLGLQLVTMLVRQVRGELTVQGEVAGGTAFTISFRGMQQGGGVVQV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCCCEEEE
ADDAKRTS
ECCCCCCC
>Mature Secondary Structure
MEKKKLLSVLIAEDNEDDAILVARSLRRSGYELIYERVDTPQGMGEALDRKPWDIILVDY
CCHHHEEEHEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEE
RMPGFGGLDALNIVRERNLDIPVILVSGVILEDVAIEAMRQGACDCIKKDHLDRLSPAVE
ECCCCCCHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RELAAAAERRERRQAEQALRESEEQFRVLAETSPAAIVLFQGENIVYVNPSAERLTGYTE
HHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCEEEEEEECCEEEEECCCHHHHCCCCH
EELLGMRYGEWIHDDFKNLVREWVLVRQQEPLALAEYELRYVTKGGEERWALFSAGRIDY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCEEEEECCCCCC
KGKPAGIATIFDITGRKRAEEQLRDSLREKEILLHEIHHRVKNNLQIVSTLLDLQSDYID
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
DEQSLRYFQESQDRINSMALVHEALYRSRDLARIDFTVYLEGLTDHLFKSYVVDPKRISL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHCCCCCCEEE
KCAIAKVTLGIDEAIPCGLIVNELVSNSLKHAFPQGRHGEILVQCQSAEDGLIRLRVSDN
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCC
GVGLPPDLDFMATKTLGLQLVTMLVRQVRGELTVQGEVAGGTAFTISFRGMQQGGGVVQV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCCCEEEE
ADDAKRTS
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]