| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581395
Identifier: 118581395
GI number: 118581395
Start: 3259329
End: 3260189
Strand: Direct
Name: 118581395
Synonym: Ppro_2990
Alternate gene names: NA
Gene position: 3259329-3260189 (Clockwise)
Preceding gene: 118581394
Following gene: 118581396
Centisome position: 81.32
GC content: 65.39
Gene sequence:
>861_bases ATGGCGCTGAACAGTGCCATGGAACGGTTCCAGATCAACGACACCCCGCGCATGACAGCATTCCTGGCCCAGGTCGGCCA TGAATCGGGCCAGCTCACCCGGCTCACGGAGAACTTGAACTACTCGGCAAAGCGGCTCATGCAGGTCTGGCCCAGGCGGT TTCCCAGCCTGGAAAGGGCGCGCGCCTATGAAAAGAACCCGCAGAAACTGGCCAACCTGGTCTACGCCGGCAGGCTGGGC AACGGCGGCGAAGGCAGCGGAGACGGCTGGCGCTTCCGGGGACGCGGCCTGATCCAGCTCACCGGCTCGATTACCTCCAA CAGGCCCGGCACCGTCAGCTACATCTTCACCCGCAGCGACAGCGCCACCGACACCGTCGTCAAGAAGCAGCTCTTCAGGA GAGCGGGAACACTGCCGGTGAGCACCACCTGGACCCTGGGGGGGGCGACACTGCCGCACTACACGGGGTGGCAGGCCATC AAGGTGCTCTCCCCCAACCCGATGACATCGGCCCAGGCTCCCTTTGAGCTGCGCTGCGACCCGCCGCTGAACAGCGCCAT CGCAGCCCATGGCAGCCTTCGCCGGAGGCAAGGTTTCGGTTCGCATCGAGCCCACGAGCGGCGCGGTCCAGATCAGGGCA CCGCAGACCAGGCGGACGCCGGGGGTGGCCATCCCGGAACGCGAACAGCTCACCCGGGCCATGAAACTGATTTCCGAGCT GGGGTGGCACGACAGCGACCTGGGCGAACCGGTCGTCACCAGGATGATGAACGCCAGCATGCCCATGGGCGGCGGGAGCA AAGACATCACGCAGAGCCAGGATGGCGTCCTGATCACCTACAAACGCCAGATCGAGGTTGA
Upstream 100 bases:
>100_bases CATATCCCCCTCTCCATCCCACGGAGGAGCCATGCCCATACTGACCGAACAGCAGCTCGCGGCAATCATGCCAGCCTGCC CGAATCCAGCCATCTGGACC
Downstream 100 bases:
>100_bases CGGCAAACGCATCGACATCCTCAACGGGGGGGGAGTGACCAGGGTACACATGGCCAGCGACGGCGCCATCCTGAGCGTCT CGCGCAACTGGAGAAAGGTG
Product: chitinase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MALNSAMERFQINDTPRMTAFLAQVGHESGQLTRLTENLNYSAKRLMQVWPRRFPSLERARAYEKNPQKLANLVYAGRLG NGGEGSGDGWRFRGRGLIQLTGSITSNRPGTVSYIFTRSDSATDTVVKKQLFRRAGTLPVSTTWTLGGATLPHYTGWQAI KVLSPNPMTSAQAPFELRCDPPLNSAIAAHGSLRRRQGFGSHRAHERRGPDQGTADQADAGGGHPGTRTAHPGHETDFRA GVARQRPGRTGRHQDDERQHAHGRREQRHHAEPGWRPDHLQTPDRG
Sequences:
>Translated_286_residues MALNSAMERFQINDTPRMTAFLAQVGHESGQLTRLTENLNYSAKRLMQVWPRRFPSLERARAYEKNPQKLANLVYAGRLG NGGEGSGDGWRFRGRGLIQLTGSITSNRPGTVSYIFTRSDSATDTVVKKQLFRRAGTLPVSTTWTLGGATLPHYTGWQAI KVLSPNPMTSAQAPFELRCDPPLNSAIAAHGSLRRRQGFGSHRAHERRGPDQGTADQADAGGGHPGTRTAHPGHETDFRA GVARQRPGRTGRHQDDERQHAHGRREQRHHAEPGWRPDHLQTPDRG >Mature_285_residues ALNSAMERFQINDTPRMTAFLAQVGHESGQLTRLTENLNYSAKRLMQVWPRRFPSLERARAYEKNPQKLANLVYAGRLGN GGEGSGDGWRFRGRGLIQLTGSITSNRPGTVSYIFTRSDSATDTVVKKQLFRRAGTLPVSTTWTLGGATLPHYTGWQAIK VLSPNPMTSAQAPFELRCDPPLNSAIAAHGSLRRRQGFGSHRAHERRGPDQGTADQADAGGGHPGTRTAHPGHETDFRAG VARQRPGRTGRHQDDERQHAHGRREQRHHAEPGWRPDHLQTPDRG
Specific function: Unknown
COG id: COG3179
COG function: function code R; Predicted chitinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage D29 and phage L5 gp10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000726 [H]
Pfam domain/function: PF00182 Glyco_hydro_19 [H]
EC number: NA
Molecular weight: Translated: 31683; Mature: 31551
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNSAMERFQINDTPRMTAFLAQVGHESGQLTRLTENLNYSAKRLMQVWPRRFPSLERA CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHCCCHHHH RAYEKNPQKLANLVYAGRLGNGGEGSGDGWRFRGRGLIQLTGSITSNRPGTVSYIFTRSD HHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCEEEEEEECCC SATDTVVKKQLFRRAGTLPVSTTWTLGGATLPHYTGWQAIKVLSPNPMTSAQAPFELRCD CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECC PPLNSAIAAHGSLRRRQGFGSHRAHERRGPDQGTADQADAGGGHPGTRTAHPGHETDFRA CCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH GVARQRPGRTGRHQDDERQHAHGRREQRHHAEPGWRPDHLQTPDRG HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALNSAMERFQINDTPRMTAFLAQVGHESGQLTRLTENLNYSAKRLMQVWPRRFPSLERA CHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHCCCHHHH RAYEKNPQKLANLVYAGRLGNGGEGSGDGWRFRGRGLIQLTGSITSNRPGTVSYIFTRSD HHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCEEEEEEECCC SATDTVVKKQLFRRAGTLPVSTTWTLGGATLPHYTGWQAIKVLSPNPMTSAQAPFELRCD CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECC PPLNSAIAAHGSLRRRQGFGSHRAHERRGPDQGTADQADAGGGHPGTRTAHPGHETDFRA CCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH GVARQRPGRTGRHQDDERQHAHGRREQRHHAEPGWRPDHLQTPDRG HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]