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The map label for this gene is rdoA [H]

Identifier: 118581323

GI number: 118581323

Start: 3192238

End: 3193224

Strand: Reverse

Name: rdoA [H]

Synonym: Ppro_2918

Alternate gene names: 118581323

Gene position: 3193224-3192238 (Counterclockwise)

Preceding gene: 118581329

Following gene: 118581322

Centisome position: 79.67

GC content: 63.63

Gene sequence:

>987_bases
ATGACCGTGAACAAGCACCCCTTTCAGACCCTGACCCCGGAATTCATCATGGATAGCGTGGAGAGCCAGGGATTCCGGTG
CGATTGCCGTACCCTGGCACTGAACAGCTACGAGAACCGCGTGTATCAGGTCGGTATCGACGAGGGGGCGCCGCTGATCG
CCAAGTTTTACCGCCCCGACCGCTGGAGCGACGTCCAGATCATGGAGGAGCATCGTTTCTGCTTCAACCTTGCGGAGCAT
GAACTGCCGGTAGTGGCCCCCTGGCGCAATGCCGCCGGCGAGAGCCTCTTCTCCCACCAAGGGTTCCGCTTCGCCCTCTA
TCCCCGCCAGGGTGGGCGTGCCCCGGAGTTCGACAACCTGGACAACCTCCTGATCCTGGGGCGCATGCTGGGACGCATCC
ATGCCATCGGCGAGCTTCAGCGTTTTGAAGAACGACCGGCCCTGGATGTCCGCGCTTTCGGGTATGAGAGCGTGGCCCTG
ATCCGGGAGCGGTTCATGCCCGATGAGTACCGGGAGAGCTACATCGCGGTAACCGAGCTGCTGTTGCGGAGGATCGAGAC
AATCCTGGCCGAGGTCGGCCCGATCCGTTATATCCGCGCCCATGGCGACTGCCATGCCGGCAACATTCTCTGGCGTGATA
ACGCGCCGCACTTCGTGGACTTCGACGATGCCCGCATGGCCCCGGCGGTTCAGGATCTCTGGATGATGCTCTCCGGAGAC
CGCGGGCGCAAGACAGCCCAACTGGAGGCGCTGGTGAGGGGGTATCGCGAGTTCCGGGACTTCGACCCGCTGGAGTTGCG
CCTGGTTGAGGCGCTGCGCACCCTGCGCATGCTGCACTATAGCGCCTGGCTGGCCCGGCGCTGGGAGGATCCGCTCTTTC
CCGCCACCTTCCCCTGGTTCAACAGCGTCCGCTACTGGGGCGAGCAGATCCTGGAACTGCGCGAGCAGCTGGCGCTGCTT
GACGAACCACCGCTGGAGTTGGAGTAG

Upstream 100 bases:

>100_bases
CCTGTGCCAAAAAGTGCTATGGTGGAAATCTTGAAATCCACTGCGTTGAACCTGGGTTGGACGGCAGCGGCTGTCGCCTG
CGGGGGCAACGGAAAGAACC

Downstream 100 bases:

>100_bases
CTCGCCTATCCGCGTTATGGTATATGAATGCTGTGCGGGGCACCCTGCCGGAGGAACGCTCTTTTTCCGGTTCTTCCCTC
TTCGGCAGTTTGCCGTCCGC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTVNKHPFQTLTPEFIMDSVESQGFRCDCRTLALNSYENRVYQVGIDEGAPLIAKFYRPDRWSDVQIMEEHRFCFNLAEH
ELPVVAPWRNAAGESLFSHQGFRFALYPRQGGRAPEFDNLDNLLILGRMLGRIHAIGELQRFEERPALDVRAFGYESVAL
IRERFMPDEYRESYIAVTELLLRRIETILAEVGPIRYIRAHGDCHAGNILWRDNAPHFVDFDDARMAPAVQDLWMMLSGD
RGRKTAQLEALVRGYREFRDFDPLELRLVEALRTLRMLHYSAWLARRWEDPLFPATFPWFNSVRYWGEQILELREQLALL
DEPPLELE

Sequences:

>Translated_328_residues
MTVNKHPFQTLTPEFIMDSVESQGFRCDCRTLALNSYENRVYQVGIDEGAPLIAKFYRPDRWSDVQIMEEHRFCFNLAEH
ELPVVAPWRNAAGESLFSHQGFRFALYPRQGGRAPEFDNLDNLLILGRMLGRIHAIGELQRFEERPALDVRAFGYESVAL
IRERFMPDEYRESYIAVTELLLRRIETILAEVGPIRYIRAHGDCHAGNILWRDNAPHFVDFDDARMAPAVQDLWMMLSGD
RGRKTAQLEALVRGYREFRDFDPLELRLVEALRTLRMLHYSAWLARRWEDPLFPATFPWFNSVRYWGEQILELREQLALL
DEPPLELE
>Mature_327_residues
TVNKHPFQTLTPEFIMDSVESQGFRCDCRTLALNSYENRVYQVGIDEGAPLIAKFYRPDRWSDVQIMEEHRFCFNLAEHE
LPVVAPWRNAAGESLFSHQGFRFALYPRQGGRAPEFDNLDNLLILGRMLGRIHAIGELQRFEERPALDVRAFGYESVALI
RERFMPDEYRESYIAVTELLLRRIETILAEVGPIRYIRAHGDCHAGNILWRDNAPHFVDFDDARMAPAVQDLWMMLSGDR
GRKTAQLEALVRGYREFRDFDPLELRLVEALRTLRMLHYSAWLARRWEDPLFPATFPWFNSVRYWGEQILELREQLALLD
EPPLELE

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=44.5121951219512, Blast_Score=288, Evalue=5e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38476; Mature: 38345

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNKHPFQTLTPEFIMDSVESQGFRCDCRTLALNSYENRVYQVGIDEGAPLIAKFYRPD
CCCCCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCC
RWSDVQIMEEHRFCFNLAEHELPVVAPWRNAAGESLFSHQGFRFALYPRQGGRAPEFDNL
CCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
DNLLILGRMLGRIHAIGELQRFEERPALDVRAFGYESVALIRERFMPDEYRESYIAVTEL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHH
LLRRIETILAEVGPIRYIRAHGDCHAGNILWRDNAPHFVDFDDARMAPAVQDLWMMLSGD
HHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHCCC
RGRKTAQLEALVRGYREFRDFDPLELRLVEALRTLRMLHYSAWLARRWEDPLFPATFPWF
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
NSVRYWGEQILELREQLALLDEPPLELE
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TVNKHPFQTLTPEFIMDSVESQGFRCDCRTLALNSYENRVYQVGIDEGAPLIAKFYRPD
CCCCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCC
RWSDVQIMEEHRFCFNLAEHELPVVAPWRNAAGESLFSHQGFRFALYPRQGGRAPEFDNL
CCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
DNLLILGRMLGRIHAIGELQRFEERPALDVRAFGYESVALIRERFMPDEYRESYIAVTEL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHH
LLRRIETILAEVGPIRYIRAHGDCHAGNILWRDNAPHFVDFDDARMAPAVQDLWMMLSGD
HHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHCCC
RGRKTAQLEALVRGYREFRDFDPLELRLVEALRTLRMLHYSAWLARRWEDPLFPATFPWF
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
NSVRYWGEQILELREQLALLDEPPLELE
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]