| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581307
Identifier: 118581307
GI number: 118581307
Start: 3175312
End: 3175971
Strand: Reverse
Name: 118581307
Synonym: Ppro_2902
Alternate gene names: NA
Gene position: 3175971-3175312 (Counterclockwise)
Preceding gene: 118581308
Following gene: 118581306
Centisome position: 79.24
GC content: 64.09
Gene sequence:
>660_bases ATGACTTTTTCTCTCGATGCCATTACCGCCCAGCTTGAACGCCATCGGCAGCTGGAAAGCCCGGCCGTTTTCGAGGCCAA GACCCGCGCCGCCGTGGCGATGATTCTGCGCCAGGGGAAGAGCGGTCTGGAGTTGCTCTTTATCCAGCGCGCGCTGTATG AGAACGATCCCTGGTCCGGCAACATCGCCTTTCCCGGCGGCAAGGTGCAGGCGGGCGAGGGGCCGCGCCAGGCCGCGGAG CGTGAAACTGCCGAGGAGATCGGTCTTGACCTGTCCGGCGCGCGCTACCTGGGGCAGATGCCGGTGGTGCGCGGCTCGCA CCTGCCGGTGCAGGTTTCCTGTTACGTCTACTGGGTGAACGGCTCTCGCCCGCAGTTGGAGTTGAACGGCGAGGTGCAGG ACACGTACTGGGCCGACCTGGATGAACTGGACGATCCTGAGCGGCGCCTGATCGCCCCGGTGCGCTTCGGCGGCGAGGAA TTCGAGGTGCCTGCCATCAGGCTCCCCTGGCCCGGCTCTCCGGTGCTGTGGGGACTTACCTACCGGCTGGTCATGCATTT CCTGGAGATGCACCGCGACAACGGAAGCGGTGTTCTTATCCCCCCGGAAAATCGCCCCTTGGAACGGCAGCAGGGTTGCA TTTTTTCCGAGATCGGCTAA
Upstream 100 bases:
>100_bases TGTTTTGTAGTATGCTTGGAACTGTGAATGGCAACGGTGCTCCCCGGCAACGGGTGGCTGTTGAAGATAACGACTGGTTC CGAATCGAGGTGTTGCACGA
Downstream 100 bases:
>100_bases GCTGCTCCGCGAAGCATTATTCTGAACGCAAAAGGAGGATTTCGATGAGTGAACGAACCGTAACCTTTATGGGCAATCCT TTGACATTGCTTGGCTCGGA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTFSLDAITAQLERHRQLESPAVFEAKTRAAVAMILRQGKSGLELLFIQRALYENDPWSGNIAFPGGKVQAGEGPRQAAE RETAEEIGLDLSGARYLGQMPVVRGSHLPVQVSCYVYWVNGSRPQLELNGEVQDTYWADLDELDDPERRLIAPVRFGGEE FEVPAIRLPWPGSPVLWGLTYRLVMHFLEMHRDNGSGVLIPPENRPLERQQGCIFSEIG
Sequences:
>Translated_219_residues MTFSLDAITAQLERHRQLESPAVFEAKTRAAVAMILRQGKSGLELLFIQRALYENDPWSGNIAFPGGKVQAGEGPRQAAE RETAEEIGLDLSGARYLGQMPVVRGSHLPVQVSCYVYWVNGSRPQLELNGEVQDTYWADLDELDDPERRLIAPVRFGGEE FEVPAIRLPWPGSPVLWGLTYRLVMHFLEMHRDNGSGVLIPPENRPLERQQGCIFSEIG >Mature_218_residues TFSLDAITAQLERHRQLESPAVFEAKTRAAVAMILRQGKSGLELLFIQRALYENDPWSGNIAFPGGKVQAGEGPRQAAER ETAEEIGLDLSGARYLGQMPVVRGSHLPVQVSCYVYWVNGSRPQLELNGEVQDTYWADLDELDDPERRLIAPVRFGGEEF EVPAIRLPWPGSPVLWGLTYRLVMHFLEMHRDNGSGVLIPPENRPLERQQGCIFSEIG
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24541; Mature: 24410
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSLDAITAQLERHRQLESPAVFEAKTRAAVAMILRQGKSGLELLFIQRALYENDPWSG CEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC NIAFPGGKVQAGEGPRQAAERETAEEIGLDLSGARYLGQMPVVRGSHLPVQVSCYVYWVN EEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEEC GSRPQLELNGEVQDTYWADLDELDDPERRLIAPVRFGGEEFEVPAIRLPWPGSPVLWGLT CCCCEEEECCCCCCCCCCCCHHCCCCHHHEEEEEEECCCEECCCEEECCCCCCCHHHHHH YRLVMHFLEMHRDNGSGVLIPPENRPLERQQGCIFSEIG HHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCCEECCCC >Mature Secondary Structure TFSLDAITAQLERHRQLESPAVFEAKTRAAVAMILRQGKSGLELLFIQRALYENDPWSG EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC NIAFPGGKVQAGEGPRQAAERETAEEIGLDLSGARYLGQMPVVRGSHLPVQVSCYVYWVN EEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEEC GSRPQLELNGEVQDTYWADLDELDDPERRLIAPVRFGGEEFEVPAIRLPWPGSPVLWGLT CCCCEEEECCCCCCCCCCCCHHCCCCHHHEEEEEEECCCEECCCEEECCCCCCCHHHHHH YRLVMHFLEMHRDNGSGVLIPPENRPLERQQGCIFSEIG HHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA