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The map label for this gene is 118581260

Identifier: 118581260

GI number: 118581260

Start: 3124228

End: 3125466

Strand: Direct

Name: 118581260

Synonym: Ppro_2854

Alternate gene names: NA

Gene position: 3124228-3125466 (Clockwise)

Preceding gene: 118581256

Following gene: 118581261

Centisome position: 77.95

GC content: 57.71

Gene sequence:

>1239_bases
ATGGACATAGCCGCGCTCAAACGCTCCGGCCACAGTATCCGATGGATCGCACGCAAGTTGGGCATTCATCGCAAGACCGT
GAAGAAGTATCTCGAAAGCAACTCTTTCCCTGCCTATCATCGGAAAGACATCAAACCATCCATCCTTGAACCGTATCACC
AGATCATCCGGGATTTTCTCGATGAGGATGAATATCAGGCCACTTGGATACTCACCCGTATTAAAAGGATGGGGTATTCC
GGCAGTTACGATACCCTCAAGGTATTCGTCCGCTCCATCAAGGAACAGAAGCGGCGCATCGCCTATCAGCGCTTCGAAAC
GGAGCCTGGGCTCCAGGCCCAGGTTGACTGGGGAGATTTCAAGGTGGTCGAGTCCACGGGAAAGACCACAACCCTCTACG
CCTTCGTGATGGTACTGGGATTTTCCCGGGCCATGTACGTCGAATTCGTTGAACGATGCACCCTGGAGGTGTTCATGGAC
TGTCACCTCCGGGCATTTCGCCACCTCAAGGGCGTTCCCGCCGAGATCCTCTACGACAACATGAAGCAGGTCGTCGTGGG
CCGGGAGAATGGCCGGCCGGTGTTCAACACCGAATTCCTTCATTTTGCCAGGCACTACGGTTTTACGCCCCGCCTCTGCC
CTCCCTACAGCCCCTGGGTAAAGGGAAAGGTCGAACGCCCCATGCACTATGTGCGAGAAAGTTTCTGGAGGGGGTACGGA
TTCCATTCTCTGGAAGAGACCAATCAGGATGTTGCCGCCTGGATCGCGGAGACTGCCCACCAGCGCATCCACGGTACCCA
CCGTCAGCAGGTTCAGGCCCGCTGGGAGCAGGAGCAGCCCTGCCTGGGAGTTCTACCGCCCTCCGAATACGACACTTCCC
TCAAGTATTTCCGCAAGGTCTACAAGGACTGCCTGCTTTCCTTTGGCGGCAACCGCTACTACGTTCCCTACCAGGAAGCC
GGGAGAAAGGTTCTCCTGAAGGTCAAGGCCGGCGTCATTCGGATCTATCACGATGACGAACTGCTGGCCCTGTACCAGAT
TCCGGAACTCAAAGGGCAGACCATCGGCATTCCTGACAAACCGCCACCCCGGACTCCTCGGCAGACCCCGCGCTATGGCC
AGGACCGGGGGAAGGCCACCCGTGGTCTCACGACCGGAACGCTCTACCCCGAGGTCTACCGTCGCCCTCTGGAAGAGTAT
GACCGCTACGCCGCCGGAGGTGCCCCATGGAACAGCTGA

Upstream 100 bases:

>100_bases
ATAATGTCCCAAAAGCGGTAACGAAAAGTGTACCGCCCTGGAAGCCGTGGTATCCCTTCTGGAGAAAGGAGGGGTGCCCA
TGATTTCCACGGAGGTAGTT

Downstream 100 bases:

>100_bases
CCTATGAGCGCCTCCAGGACAACCTGAAACGACTGAAACTCTTCAAGGCGGTGGAAATCCTTGACGATGTCGCCACCATC
ACCCAGAGCGACGGGAGCTC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MDIAALKRSGHSIRWIARKLGIHRKTVKKYLESNSFPAYHRKDIKPSILEPYHQIIRDFLDEDEYQATWILTRIKRMGYS
GSYDTLKVFVRSIKEQKRRIAYQRFETEPGLQAQVDWGDFKVVESTGKTTTLYAFVMVLGFSRAMYVEFVERCTLEVFMD
CHLRAFRHLKGVPAEILYDNMKQVVVGRENGRPVFNTEFLHFARHYGFTPRLCPPYSPWVKGKVERPMHYVRESFWRGYG
FHSLEETNQDVAAWIAETAHQRIHGTHRQQVQARWEQEQPCLGVLPPSEYDTSLKYFRKVYKDCLLSFGGNRYYVPYQEA
GRKVLLKVKAGVIRIYHDDELLALYQIPELKGQTIGIPDKPPPRTPRQTPRYGQDRGKATRGLTTGTLYPEVYRRPLEEY
DRYAAGGAPWNS

Sequences:

>Translated_412_residues
MDIAALKRSGHSIRWIARKLGIHRKTVKKYLESNSFPAYHRKDIKPSILEPYHQIIRDFLDEDEYQATWILTRIKRMGYS
GSYDTLKVFVRSIKEQKRRIAYQRFETEPGLQAQVDWGDFKVVESTGKTTTLYAFVMVLGFSRAMYVEFVERCTLEVFMD
CHLRAFRHLKGVPAEILYDNMKQVVVGRENGRPVFNTEFLHFARHYGFTPRLCPPYSPWVKGKVERPMHYVRESFWRGYG
FHSLEETNQDVAAWIAETAHQRIHGTHRQQVQARWEQEQPCLGVLPPSEYDTSLKYFRKVYKDCLLSFGGNRYYVPYQEA
GRKVLLKVKAGVIRIYHDDELLALYQIPELKGQTIGIPDKPPPRTPRQTPRYGQDRGKATRGLTTGTLYPEVYRRPLEEY
DRYAAGGAPWNS
>Mature_412_residues
MDIAALKRSGHSIRWIARKLGIHRKTVKKYLESNSFPAYHRKDIKPSILEPYHQIIRDFLDEDEYQATWILTRIKRMGYS
GSYDTLKVFVRSIKEQKRRIAYQRFETEPGLQAQVDWGDFKVVESTGKTTTLYAFVMVLGFSRAMYVEFVERCTLEVFMD
CHLRAFRHLKGVPAEILYDNMKQVVVGRENGRPVFNTEFLHFARHYGFTPRLCPPYSPWVKGKVERPMHYVRESFWRGYG
FHSLEETNQDVAAWIAETAHQRIHGTHRQQVQARWEQEQPCLGVLPPSEYDTSLKYFRKVYKDCLLSFGGNRYYVPYQEA
GRKVLLKVKAGVIRIYHDDELLALYQIPELKGQTIGIPDKPPPRTPRQTPRYGQDRGKATRGLTTGTLYPEVYRRPLEEY
DRYAAGGAPWNS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR006120
- InterPro:   IPR012337 [H]

Pfam domain/function: PF02796 HTH_7; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 48246; Mature: 48246

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIAALKRSGHSIRWIARKLGIHRKTVKKYLESNSFPAYHRKDIKPSILEPYHQIIRDFL
CCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHH
DEDEYQATWILTRIKRMGYSGSYDTLKVFVRSIKEQKRRIAYQRFETEPGLQAQVDWGDF
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCE
KVVESTGKTTTLYAFVMVLGFSRAMYVEFVERCTLEVFMDCHLRAFRHLKGVPAEILYDN
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MKQVVVGRENGRPVFNTEFLHFARHYGFTPRLCPPYSPWVKGKVERPMHYVRESFWRGYG
HHHHEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCC
FHSLEETNQDVAAWIAETAHQRIHGTHRQQVQARWEQEQPCLGVLPPSEYDTSLKYFRKV
CCCHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHH
YKDCLLSFGGNRYYVPYQEAGRKVLLKVKAGVIRIYHDDELLALYQIPELKGQTIGIPDK
HHHHHHHCCCCEEECCHHHCCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCEECCCCC
PPPRTPRQTPRYGQDRGKATRGLTTGTLYPEVYRRPLEEYDRYAAGGAPWNS
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDIAALKRSGHSIRWIARKLGIHRKTVKKYLESNSFPAYHRKDIKPSILEPYHQIIRDFL
CCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHH
DEDEYQATWILTRIKRMGYSGSYDTLKVFVRSIKEQKRRIAYQRFETEPGLQAQVDWGDF
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCE
KVVESTGKTTTLYAFVMVLGFSRAMYVEFVERCTLEVFMDCHLRAFRHLKGVPAEILYDN
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MKQVVVGRENGRPVFNTEFLHFARHYGFTPRLCPPYSPWVKGKVERPMHYVRESFWRGYG
HHHHEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCC
FHSLEETNQDVAAWIAETAHQRIHGTHRQQVQARWEQEQPCLGVLPPSEYDTSLKYFRKV
CCCHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHH
YKDCLLSFGGNRYYVPYQEAGRKVLLKVKAGVIRIYHDDELLALYQIPELKGQTIGIPDK
HHHHHHHCCCCEEECCHHHCCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCEECCCCC
PPPRTPRQTPRYGQDRGKATRGLTTGTLYPEVYRRPLEEYDRYAAGGAPWNS
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]