| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is pstS [H]
Identifier: 118581249
GI number: 118581249
Start: 3109325
End: 3110158
Strand: Reverse
Name: pstS [H]
Synonym: Ppro_2843
Alternate gene names: 118581249
Gene position: 3110158-3109325 (Counterclockwise)
Preceding gene: 118581251
Following gene: 118581248
Centisome position: 77.6
GC content: 58.63
Gene sequence:
>834_bases ATGAAGAAAACAGCCCTGGTACGCGTGGCGCTTTCACTGGCTGCCCTGGTACTGTCCGCCCTTCCGGTTTTTTCGGGAGA ACTCGATTCGTTCAAGAACGAAAGGGGGGAGTTGAAGATCTCCGGGGGAACCGCGCACATCCCGGTCATGAAGGAGGCCG CCCAGAAGATCATGACCGTGAACCCCGAGATTCAGATCAGCATCGCCGGCGGAGGCTCCGGTGTGGGCATCAAGCAGGTG GGTGAGGGACTGGTCAACATCGGCAATAGCGGCAGAAAGCCGACCGGGGACGAAATCGCCCGCTATCAGCTCAGGGTCTA TCAGTGGGCAGTGGACGGTGTGGCGCCGGTGGTGAACCCCAAGAATCGCGTCACAAAACTGACAAAAGGCCAGCTTGCCG AGGTCTTTTCCGGAAAGATAGACAACTGGAAACAGCTGGGTGGCACTGACCGCAGGATCAACCTCTACACCCGCGATGAG GCCAGCGGAACCCGCGAAGTGTTCTGGGAGAAGGGGCTCGGCAAGGGGCAGATCTCTTCTGCTGCCAATGTGGTGGTGTC AAACGGCGCCATGAAATCGGCCGTGGCAAAGGATCCCTATGGCATCGGCTATGTTTCGGTGGGGCATATCGACCGGACCG TGTCGGCGGTCAGCCTTGACGGCGTCACGCCGATGATCAGGACCGTGCAGGACGGCAGCTATGGCATCTCCCGCGGACTG TACAGCAATACCAGGGGAGAACCTTCCGGCATCACGAAGAAATTCATCGACTATCTGCGTACTTCAGCCGGGAAGGCGAT CATCAGGAAACACGGATTTATCCCGGTCCGATGA
Upstream 100 bases:
>100_bases GACCCCGGGTACCGGTTGTGCCGTTTTGAAGCTGTTTGACATCGCATGGCGTATTTGCTAGCCTCCCCCCTTCGCAAGTC ATTTCGCAAAGGAGGAGAGA
Downstream 100 bases:
>100_bases AAAAAATCAGGGAACTGCTTGCGGAGAGGTTTTTTCTCCTCTCCGCACTGGCAAGCTCATCCATAACCCTGGTGATTCTG GCCTTCATGGTGTACATGGG
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKKTALVRVALSLAALVLSALPVFSGELDSFKNERGELKISGGTAHIPVMKEAAQKIMTVNPEIQISIAGGGSGVGIKQV GEGLVNIGNSGRKPTGDEIARYQLRVYQWAVDGVAPVVNPKNRVTKLTKGQLAEVFSGKIDNWKQLGGTDRRINLYTRDE ASGTREVFWEKGLGKGQISSAANVVVSNGAMKSAVAKDPYGIGYVSVGHIDRTVSAVSLDGVTPMIRTVQDGSYGISRGL YSNTRGEPSGITKKFIDYLRTSAGKAIIRKHGFIPVR
Sequences:
>Translated_277_residues MKKTALVRVALSLAALVLSALPVFSGELDSFKNERGELKISGGTAHIPVMKEAAQKIMTVNPEIQISIAGGGSGVGIKQV GEGLVNIGNSGRKPTGDEIARYQLRVYQWAVDGVAPVVNPKNRVTKLTKGQLAEVFSGKIDNWKQLGGTDRRINLYTRDE ASGTREVFWEKGLGKGQISSAANVVVSNGAMKSAVAKDPYGIGYVSVGHIDRTVSAVSLDGVTPMIRTVQDGSYGISRGL YSNTRGEPSGITKKFIDYLRTSAGKAIIRKHGFIPVR >Mature_277_residues MKKTALVRVALSLAALVLSALPVFSGELDSFKNERGELKISGGTAHIPVMKEAAQKIMTVNPEIQISIAGGGSGVGIKQV GEGLVNIGNSGRKPTGDEIARYQLRVYQWAVDGVAPVVNPKNRVTKLTKGQLAEVFSGKIDNWKQLGGTDRRINLYTRDE ASGTREVFWEKGLGKGQISSAANVVVSNGAMKSAVAKDPYGIGYVSVGHIDRTVSAVSLDGVTPMIRTVQDGSYGISRGL YSNTRGEPSGITKKFIDYLRTSAGKAIIRKHGFIPVR
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 29556; Mature: 29556
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTALVRVALSLAALVLSALPVFSGELDSFKNERGELKISGGTAHIPVMKEAAQKIMTV CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCEEECHHHHHHHHHHEEC NPEIQISIAGGGSGVGIKQVGEGLVNIGNSGRKPTGDEIARYQLRVYQWAVDGVAPVVNP CCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEHHCCCCCCCCC KNRVTKLTKGQLAEVFSGKIDNWKQLGGTDRRINLYTRDEASGTREVFWEKGLGKGQISS HHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCC AANVVVSNGAMKSAVAKDPYGIGYVSVGHIDRTVSAVSLDGVTPMIRTVQDGSYGISRGL HHEEEEECCCHHHHHHCCCCCCCEEEECCHHHHHHEEEECCCCHHHHHHCCCCCHHHHCC YSNTRGEPSGITKKFIDYLRTSAGKAIIRKHGFIPVR CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure MKKTALVRVALSLAALVLSALPVFSGELDSFKNERGELKISGGTAHIPVMKEAAQKIMTV CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCEEECHHHHHHHHHHEEC NPEIQISIAGGGSGVGIKQVGEGLVNIGNSGRKPTGDEIARYQLRVYQWAVDGVAPVVNP CCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEHHCCCCCCCCC KNRVTKLTKGQLAEVFSGKIDNWKQLGGTDRRINLYTRDEASGTREVFWEKGLGKGQISS HHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCC AANVVVSNGAMKSAVAKDPYGIGYVSVGHIDRTVSAVSLDGVTPMIRTVQDGSYGISRGL HHEEEEECCCHHHHHHCCCCCCCEEEECCHHHHHHEEEECCCCHHHHHHCCCCCHHHHCC YSNTRGEPSGITKKFIDYLRTSAGKAIIRKHGFIPVR CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]