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The map label for this gene is 118581231

Identifier: 118581231

GI number: 118581231

Start: 3091893

End: 3093323

Strand: Direct

Name: 118581231

Synonym: Ppro_2825

Alternate gene names: NA

Gene position: 3091893-3093323 (Clockwise)

Preceding gene: 118581230

Following gene: 118581232

Centisome position: 77.14

GC content: 58.0

Gene sequence:

>1431_bases
ATGAAACCACTTTTTCTAAACCCCCCTACCTTTGATGACTTCGACGGCGGTGCTGGCGCGCGCTATCAGGCCTCTCGCGA
GGTGACATCATTCTGGTATCCCACCTGGCTCTGCTTCCCGGCGGCCATGATCGAGGGGAGCCGCGTGGTTGACGCCCCGG
TACAGAAATTCGACCTGGAAAAGTGCCTGGAAATAGCCAGGGATTTCGACATGGTGGTGATGTACACTTCCACCCCGACC
CTGATGATCGACATTGCGACCGCACGGCGCATCAAGGAAGTAAAACCGGACGTGATAACCGTGCTGACCGGACCGCACGT
CACCATCTTGCCCGAAGAATCCCTGCGCGCCGGCAAGGGCGCCATCGACATTGTCTGCCGCGGAGAATTCGACTACTCCA
CCAAGGAACTGTGCGAGGGGCGCCCTTGGGACAGGGTGGACGGCATTAGCTTCCTGCGGGACGGCAAGGCAGTCCACACC
CCCGACCGTCCCATGATCGAGGACTTGGACGCGCTCCCCTTCGTTGCCCCTGTCTACCGCCGCGACCTGCCGATCAGCGA
ATACGTGATACCCCACTTCAAGAATCCCTACGTATCCATTTACTCCAGTCGCGGCTGCCCCTCCAAGTGCATTTACTGCC
TCTGGCCCCAGACCTTTTCGGGCCAGCGCATGCGCACCCGCTCAGCGCGGAACGTCTACGAGGAGATCAAGTGGATCACC
GAGAACATACCCGAGATGCGGGAACTCTCCTTCGATGACGACACCTTCACCGCCAACCGAGAGCACGCCCGGGAGGTTGC
CCGCCTAATCAAGCCGCTGGGTATATCCTGGACCATCAACGCCCGCGCCAATACCGATTACGAGACGCTCAGGGTTATGC
GCGAATGCGGCTTGCGCCATGTGGTGGTCGGTTTCGAGAGCGGCAACGCCCAGATACTCAAGAATATCAAGAAGGGGGTC
AGCAAGGAGCAGGCCATCCAGTTCGTGAAGGATTGCAAGAAGCTGGGGCTTTCCATTCACGGCGCCTTCATTATGGGATT
ACCCGGGGAAACCAGGGAAACCATCGCTGAAACCATCAACTATGCCAAGCAACTGGACTTGAACTCGATCCAGGCCTCCC
TGGCCTCCCCCTACCCCGGCACTGAGTTCTACACCATGTGCAAGGAGCAAGGCTGGATCGCCTCGGACAACTTCCTGGAC
GACAGCGGCCACCAGAAGTGCGTAATCAACTACCCCCACCTTTCCAATGCCGAAATATTCAACTCGGTGGAGGAGTTTTA
CGATAAATTCTACTTCCGCCCCAAATACATCCTGCGCAGCATCGGCAAGATGATCGTTGACGGCGAGGAGCGCCGGAAGC
TGCTCAAGGAAGGGAAACAGTACCTGCAGTACATGCGCAAGCGTAAAGAGTCCCGCTGCGACTGCAAATAG

Upstream 100 bases:

>100_bases
TTCTTTCCGCTCTGTTCCGGTGGGCAAGCCCCCCATAAATCTTGACTTTAGCATATGAGATCAGTATTCTGGCTGTTTTA
AGAGCAGACAAGGAGCTGTA

Downstream 100 bases:

>100_bases
CGGTCGACCGCGCCTTGAAACAATGAAGCAACTCATTATCACCTCAGACGATTTCGGCCTCTCGGACGGAGTCAACCGCG
CGGTCGAACAGGCCTGGCGC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKPLFLNPPTFDDFDGGAGARYQASREVTSFWYPTWLCFPAAMIEGSRVVDAPVQKFDLEKCLEIARDFDMVVMYTSTPT
LMIDIATARRIKEVKPDVITVLTGPHVTILPEESLRAGKGAIDIVCRGEFDYSTKELCEGRPWDRVDGISFLRDGKAVHT
PDRPMIEDLDALPFVAPVYRRDLPISEYVIPHFKNPYVSIYSSRGCPSKCIYCLWPQTFSGQRMRTRSARNVYEEIKWIT
ENIPEMRELSFDDDTFTANREHAREVARLIKPLGISWTINARANTDYETLRVMRECGLRHVVVGFESGNAQILKNIKKGV
SKEQAIQFVKDCKKLGLSIHGAFIMGLPGETRETIAETINYAKQLDLNSIQASLASPYPGTEFYTMCKEQGWIASDNFLD
DSGHQKCVINYPHLSNAEIFNSVEEFYDKFYFRPKYILRSIGKMIVDGEERRKLLKEGKQYLQYMRKRKESRCDCK

Sequences:

>Translated_476_residues
MKPLFLNPPTFDDFDGGAGARYQASREVTSFWYPTWLCFPAAMIEGSRVVDAPVQKFDLEKCLEIARDFDMVVMYTSTPT
LMIDIATARRIKEVKPDVITVLTGPHVTILPEESLRAGKGAIDIVCRGEFDYSTKELCEGRPWDRVDGISFLRDGKAVHT
PDRPMIEDLDALPFVAPVYRRDLPISEYVIPHFKNPYVSIYSSRGCPSKCIYCLWPQTFSGQRMRTRSARNVYEEIKWIT
ENIPEMRELSFDDDTFTANREHAREVARLIKPLGISWTINARANTDYETLRVMRECGLRHVVVGFESGNAQILKNIKKGV
SKEQAIQFVKDCKKLGLSIHGAFIMGLPGETRETIAETINYAKQLDLNSIQASLASPYPGTEFYTMCKEQGWIASDNFLD
DSGHQKCVINYPHLSNAEIFNSVEEFYDKFYFRPKYILRSIGKMIVDGEERRKLLKEGKQYLQYMRKRKESRCDCK
>Mature_476_residues
MKPLFLNPPTFDDFDGGAGARYQASREVTSFWYPTWLCFPAAMIEGSRVVDAPVQKFDLEKCLEIARDFDMVVMYTSTPT
LMIDIATARRIKEVKPDVITVLTGPHVTILPEESLRAGKGAIDIVCRGEFDYSTKELCEGRPWDRVDGISFLRDGKAVHT
PDRPMIEDLDALPFVAPVYRRDLPISEYVIPHFKNPYVSIYSSRGCPSKCIYCLWPQTFSGQRMRTRSARNVYEEIKWIT
ENIPEMRELSFDDDTFTANREHAREVARLIKPLGISWTINARANTDYETLRVMRECGLRHVVVGFESGNAQILKNIKKGV
SKEQAIQFVKDCKKLGLSIHGAFIMGLPGETRETIAETINYAKQLDLNSIQASLASPYPGTEFYTMCKEQGWIASDNFLD
DSGHQKCVINYPHLSNAEIFNSVEEFYDKFYFRPKYILRSIGKMIVDGEERRKLLKEGKQYLQYMRKRKESRCDCK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 54620; Mature: 54620

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLFLNPPTFDDFDGGAGARYQASREVTSFWYPTWLCFPAAMIEGSRVVDAPVQKFDLE
CCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHH
KCLEIARDFDMVVMYTSTPTLMIDIATARRIKEVKPDVITVLTGPHVTILPEESLRAGKG
HHHHHHCCCCEEEEEECCCEEEEEHHHHHHHHHCCCCEEEEECCCEEEEECHHHHHCCCC
AIDIVCRGEFDYSTKELCEGRPWDRVDGISFLRDGKAVHTPDRPMIEDLDALPFVAPVYR
CEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHCCCEECCCCCCHHHHHHCCCCHHHHHH
RDLPISEYVIPHFKNPYVSIYSSRGCPSKCIYCLWPQTFSGQRMRTRSARNVYEEIKWIT
CCCCHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
ENIPEMRELSFDDDTFTANREHAREVARLIKPLGISWTINARANTDYETLRVMRECGLRH
HCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEE
VVVGFESGNAQILKNIKKGVSKEQAIQFVKDCKKLGLSIHGAFIMGLPGETRETIAETIN
EEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECEEEECCCCCHHHHHHHHHH
YAKQLDLNSIQASLASPYPGTEFYTMCKEQGWIASDNFLDDSGHQKCVINYPHLSNAEIF
HHHHCCHHHHHHHHCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCCHHHH
NSVEEFYDKFYFRPKYILRSIGKMIVDGEERRKLLKEGKQYLQYMRKRKESRCDCK
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKPLFLNPPTFDDFDGGAGARYQASREVTSFWYPTWLCFPAAMIEGSRVVDAPVQKFDLE
CCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHH
KCLEIARDFDMVVMYTSTPTLMIDIATARRIKEVKPDVITVLTGPHVTILPEESLRAGKG
HHHHHHCCCCEEEEEECCCEEEEEHHHHHHHHHCCCCEEEEECCCEEEEECHHHHHCCCC
AIDIVCRGEFDYSTKELCEGRPWDRVDGISFLRDGKAVHTPDRPMIEDLDALPFVAPVYR
CEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHCCCEECCCCCCHHHHHHCCCCHHHHHH
RDLPISEYVIPHFKNPYVSIYSSRGCPSKCIYCLWPQTFSGQRMRTRSARNVYEEIKWIT
CCCCHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
ENIPEMRELSFDDDTFTANREHAREVARLIKPLGISWTINARANTDYETLRVMRECGLRH
HCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEE
VVVGFESGNAQILKNIKKGVSKEQAIQFVKDCKKLGLSIHGAFIMGLPGETRETIAETIN
EEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECEEEECCCCCHHHHHHHHHH
YAKQLDLNSIQASLASPYPGTEFYTMCKEQGWIASDNFLDDSGHQKCVINYPHLSNAEIF
HHHHCCHHHHHHHHCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCCHHHH
NSVEEFYDKFYFRPKYILRSIGKMIVDGEERRKLLKEGKQYLQYMRKRKESRCDCK
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]