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The map label for this gene is hybD [C]

Identifier: 118581203

GI number: 118581203

Start: 3060308

End: 3060811

Strand: Reverse

Name: hybD [C]

Synonym: Ppro_2796

Alternate gene names: 118581203

Gene position: 3060811-3060308 (Counterclockwise)

Preceding gene: 118581204

Following gene: 118581202

Centisome position: 76.37

GC content: 52.38

Gene sequence:

>504_bases
TTGGACCTCCTTAAAGAACTTCGTGAATGCACCCGTGGTCGTGTCTGTTTTATGGGCGTTGGCAGCACGGATTACGGTGA
TGATGGTTTCGGCATTCGTCTTGCCGAGAAACTCGAACAAAACTTGGCAAAGCGTGCCAATGCTCCGGTCGTTATCGATG
CCGGCACCATGCCGGAACGCTATACCGGTCGTATAGCCGACGAGGGGTACGACTCCCTGGTCTTTCTCGACGCAGTAGAC
TTTGGCGGCGAACCTGGTGCTGTGCTTGTAGCGAACAGCGAGGAAATGGCATCAAGGTTCCCTCAGATATCTACACACAA
AATTTCGTTAGGTATGCTGGCTAACTGGATTGAGGCCAGCGGGACAACGAAAGCCTGGTTGATCGGTGTTCAGCCTGAAT
CATTGAAGATGGGGCAGGGCGTTTCACCAACAGTACAGGATACGCTTGACATCCTCGAGGAGTTGCTGAGCGACATTTGG
TGTGAAGAAACGGACAACGGTTAG

Upstream 100 bases:

>100_bases
GCAAATGCGGCCACTGCTGCGTGGGTGTCTCCTACGTCTGCGTCGACGGCCCGGTATTTACCTACGAACAGCTGAAAACG
CTCGGGGAAGATATCTAACC

Downstream 100 bases:

>100_bases
ATCTTTAGCCGTTTCCCGACTACGAGTGCATGGCTTTGGGCCATTCGCAGAGGTGCAATAATGACTCCTGAACAAGCAGT
ACTCTTATCGATCGGCATCT

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: Hydrogenase Maturation Protease HycI; Hydrogenase; Processing Of HyaA And HyaB Proteins; Cytochrome; Peptidase; Hydrogenase Maturation Protease Hyci

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MDLLKELRECTRGRVCFMGVGSTDYGDDGFGIRLAEKLEQNLAKRANAPVVIDAGTMPERYTGRIADEGYDSLVFLDAVD
FGGEPGAVLVANSEEMASRFPQISTHKISLGMLANWIEASGTTKAWLIGVQPESLKMGQGVSPTVQDTLDILEELLSDIW
CEETDNG

Sequences:

>Translated_167_residues
MDLLKELRECTRGRVCFMGVGSTDYGDDGFGIRLAEKLEQNLAKRANAPVVIDAGTMPERYTGRIADEGYDSLVFLDAVD
FGGEPGAVLVANSEEMASRFPQISTHKISLGMLANWIEASGTTKAWLIGVQPESLKMGQGVSPTVQDTLDILEELLSDIW
CEETDNG
>Mature_167_residues
MDLLKELRECTRGRVCFMGVGSTDYGDDGFGIRLAEKLEQNLAKRANAPVVIDAGTMPERYTGRIADEGYDSLVFLDAVD
FGGEPGAVLVANSEEMASRFPQISTHKISLGMLANWIEASGTTKAWLIGVQPESLKMGQGVSPTVQDTLDILEELLSDIW
CEETDNG

Specific function: Protease Involved In The C-Terminal Processing Of Hybc, The Large Subunit Of Hydrogenase 2. Specifically Cleaves Off A 15 Amino Acid Peptide From The C Terminus Of The Precursor Of Hybc. [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789367, Length=149, Percent_Identity=30.8724832214765, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 18147; Mature: 18147

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLKELRECTRGRVCFMGVGSTDYGDDGFGIRLAEKLEQNLAKRANAPVVIDAGTMPER
CHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHH
YTGRIADEGYDSLVFLDAVDFGGEPGAVLVANSEEMASRFPQISTHKISLGMLANWIEAS
HCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCHHHHHHCCCCCCEEEHHHHHHHHHHCC
GTTKAWLIGVQPESLKMGQGVSPTVQDTLDILEELLSDIWCEETDNG
CCCEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDLLKELRECTRGRVCFMGVGSTDYGDDGFGIRLAEKLEQNLAKRANAPVVIDAGTMPER
CHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHH
YTGRIADEGYDSLVFLDAVDFGGEPGAVLVANSEEMASRFPQISTHKISLGMLANWIEAS
HCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCHHHHHHCCCCCCEEEHHHHHHHHHHCC
GTTKAWLIGVQPESLKMGQGVSPTVQDTLDILEELLSDIWCEETDNG
CCCEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA