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The map label for this gene is yibD [C]

Identifier: 118581166

GI number: 118581166

Start: 3019952

End: 3020974

Strand: Direct

Name: yibD [C]

Synonym: Ppro_2759

Alternate gene names: 118581166

Gene position: 3019952-3020974 (Clockwise)

Preceding gene: 118581165

Following gene: 118581182

Centisome position: 75.35

GC content: 41.35

Gene sequence:

>1023_bases
ATGAAGTGCAGCGTACTAATAAACAACTACAATTATTCATCATTTTTATCAAAGGCAGTAAACAGCGTACTCGAACAATC
CGTCTTACCTGACGAAATAATTGTCGTAGACGATGGCTCTACCGACGGCTCATGTGAACTTTTGCAGAACAACTACGGAA
ACAACCCTCGTATCAAGATTATCTCCAGCAAAAACAGAGGGCAACTATCTGCTATGAATCTGGGGTTTATACATAGCAGT
GGTGACATCCTGTTCTTTCTCGATTCGGATGATGAATATGATCCACATTATATTGAATCAGTCCTTGACATGTACCGGAA
GCAGCCGTCGTGCGATTTTCTGATTTGCGGTCGTAAAGAGTTTGGAGCGGTCAACAAAAACGTTCTCAGGTATAAAACTG
ATGTGAGTTTAGGCTATTCCGTCTTATCTTCGCTGTATGGTGAATATTGGGAAGGGGGCCAGACCTCGACTCTGTCGATG
AGAAGGTGGGTTCTTGATGCCTTCATGCCCCTGAACCTGGAAGCATACTGGCGGGTCAGGGCCGACGACTGCCTGGTTTA
CGGCGCCTCAATAGTTGGAGCAAAAAAATACTACCTAGCTCGTCCACTAGTATACTATCGTATCCACGATGCAAATCTCT
TCTACGGTAGAGAGTTTAACGATGATTATCAATTCAAATACAAACTTCGAATAAAACAGCTAATCCGTCATCTTGCCCAC
AAAACATTTTTAGACGGAAGCAATGTTTTTGGACTGATGAAAAAAGAGATGGCATCGTCCAGCCCCGAAGTATTTAAGGA
GAAATACAAACTCTATTTTACCTTGATTCGTCGTGCAGATCGCCATCTTTCTTGGAAAGTTTCATGTTTAAAGAGGCTAC
TATTTGTCTATATCCGTTCCAGAAAAGCAAACCAAAACAGCTCAGTTAAAAAAACATTTCATAAATTGTATAGCAACATA
TTTAGATACAATTACGATCACCAGACTTCAGCCAACATACAAAACAAAGGATCTTCAGCCTGA

Upstream 100 bases:

>100_bases
TGATAGTTTTTACTCAAAAGCGCTAAAAAAAGTAAGATTATACAACTATTTAAAATATTTAGCTTCGTAATAGCCACATA
TTCAACAGGACTATAACAAC

Downstream 100 bases:

>100_bases
TATATCTGGTAAATAAACTTGTCAAACTCACTCCTTATTTTTAAGGCGACGAGCAATCAGGGAAATGGAAATTTTTCGAC
GCTTCTTCTCAACAAACCAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKCSVLINNYNYSSFLSKAVNSVLEQSVLPDEIIVVDDGSTDGSCELLQNNYGNNPRIKIISSKNRGQLSAMNLGFIHSS
GDILFFLDSDDEYDPHYIESVLDMYRKQPSCDFLICGRKEFGAVNKNVLRYKTDVSLGYSVLSSLYGEYWEGGQTSTLSM
RRWVLDAFMPLNLEAYWRVRADDCLVYGASIVGAKKYYLARPLVYYRIHDANLFYGREFNDDYQFKYKLRIKQLIRHLAH
KTFLDGSNVFGLMKKEMASSSPEVFKEKYKLYFTLIRRADRHLSWKVSCLKRLLFVYIRSRKANQNSSVKKTFHKLYSNI
FRYNYDHQTSANIQNKGSSA

Sequences:

>Translated_340_residues
MKCSVLINNYNYSSFLSKAVNSVLEQSVLPDEIIVVDDGSTDGSCELLQNNYGNNPRIKIISSKNRGQLSAMNLGFIHSS
GDILFFLDSDDEYDPHYIESVLDMYRKQPSCDFLICGRKEFGAVNKNVLRYKTDVSLGYSVLSSLYGEYWEGGQTSTLSM
RRWVLDAFMPLNLEAYWRVRADDCLVYGASIVGAKKYYLARPLVYYRIHDANLFYGREFNDDYQFKYKLRIKQLIRHLAH
KTFLDGSNVFGLMKKEMASSSPEVFKEKYKLYFTLIRRADRHLSWKVSCLKRLLFVYIRSRKANQNSSVKKTFHKLYSNI
FRYNYDHQTSANIQNKGSSA
>Mature_340_residues
MKCSVLINNYNYSSFLSKAVNSVLEQSVLPDEIIVVDDGSTDGSCELLQNNYGNNPRIKIISSKNRGQLSAMNLGFIHSS
GDILFFLDSDDEYDPHYIESVLDMYRKQPSCDFLICGRKEFGAVNKNVLRYKTDVSLGYSVLSSLYGEYWEGGQTSTLSM
RRWVLDAFMPLNLEAYWRVRADDCLVYGASIVGAKKYYLARPLVYYRIHDANLFYGREFNDDYQFKYKLRIKQLIRHLAH
KTFLDGSNVFGLMKKEMASSSPEVFKEKYKLYFTLIRRADRHLSWKVSCLKRLLFVYIRSRKANQNSSVKKTFHKLYSNI
FRYNYDHQTSANIQNKGSSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=103, Percent_Identity=33.0097087378641, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39458; Mature: 39458

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCSVLINNYNYSSFLSKAVNSVLEQSVLPDEIIVVDDGSTDGSCELLQNNYGNNPRIKI
CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEE
ISSKNRGQLSAMNLGFIHSSGDILFFLDSDDEYDPHYIESVLDMYRKQPSCDFLICGRKE
EECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHH
FGAVNKNVLRYKTDVSLGYSVLSSLYGEYWEGGQTSTLSMRRWVLDAFMPLNLEAYWRVR
HCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEE
ADDCLVYGASIVGAKKYYLARPLVYYRIHDANLFYGREFNDDYQFKYKLRIKQLIRHLAH
CCCEEEECCHHHCCHHHHHHCCEEEEEEECCEEEECCCCCCCCEEEEEEHHHHHHHHHHH
KTFLDGSNVFGLMKKEMASSSPEVFKEKYKLYFTLIRRADRHLSWKVSCLKRLLFVYIRS
HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RKANQNSSVKKTFHKLYSNIFRYNYDHQTSANIQNKGSSA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKCSVLINNYNYSSFLSKAVNSVLEQSVLPDEIIVVDDGSTDGSCELLQNNYGNNPRIKI
CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEE
ISSKNRGQLSAMNLGFIHSSGDILFFLDSDDEYDPHYIESVLDMYRKQPSCDFLICGRKE
EECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHH
FGAVNKNVLRYKTDVSLGYSVLSSLYGEYWEGGQTSTLSMRRWVLDAFMPLNLEAYWRVR
HCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEE
ADDCLVYGASIVGAKKYYLARPLVYYRIHDANLFYGREFNDDYQFKYKLRIKQLIRHLAH
CCCEEEECCHHHCCHHHHHHCCEEEEEEECCEEEECCCCCCCCEEEEEEHHHHHHHHHHH
KTFLDGSNVFGLMKKEMASSSPEVFKEKYKLYFTLIRRADRHLSWKVSCLKRLLFVYIRS
HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RKANQNSSVKKTFHKLYSNIFRYNYDHQTSANIQNKGSSA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]