Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118581156

Identifier: 118581156

GI number: 118581156

Start: 3008432

End: 3009160

Strand: Reverse

Name: 118581156

Synonym: Ppro_2749

Alternate gene names: NA

Gene position: 3009160-3008432 (Counterclockwise)

Preceding gene: 118581157

Following gene: 118581152

Centisome position: 75.08

GC content: 62.28

Gene sequence:

>729_bases
TTGAAGAGATATCTCCCCGTCATTTTTCCGGTTGCGTGTTTGGCCATGGTCGCCATGGTCGACCCCGCTTGTGCGGTAAC
CCGTCCCTCTTCGGCTCGATCAACGACTGAGCAGGCGAATCGGCTCAGGGAGGGGGCTGCGAAGGCTTCGGCGGCCCTGT
GGCAAAAGGCCAGCGCTCAGTATGAACGTGGTCGGACAAGCGGGAATGGACGGGAAAAGGCGACTTATTTCCGGCAAGCC
GAGCACTATGCCCAGCAGGCCATCGCCGTTGACCCGCGGGGTGACGAGGGGTACAAGTGGCTGGCCATCGCCCTGGGCGC
CCAGGCGGAGGATGCCGCAGTGAGGGACCAGATCCAGTTGTCGCGCCGCGTCAAGGAAAATATCGAAAAGGCGCTTGCCC
TCGATCCCCATGACGATATCTCCCTGCTGGTGCTCAGCCGCTGGCATTACAAGGTCGCCTCGCTGAAGCCCTGGACCAGG
GGGGTGGTCAAGCTGGTCTACGGCGGCTTGCCCCAGGCATCCATGGAGAAGGCCGAGCTGCTTCTGCTGCGGGCGATCGC
GATAAGAGACCGTATCGTACACCGCTACAGTCTGGCCAAGGTCTACTACTACATGGGGAGACGTGAAGCTGCCGTCCAGC
AGTTGCGGCTGGCGCTGAAGCTGCCGGTGACGATCCCCGAGGAGACCGAGGATCTGGAGAAGGCGCGCCGGAAACTGGTC
AGCTGGTAG

Upstream 100 bases:

>100_bases
AGGTGGCGGACCAGATCTACCGTATCGAGGAACAAACGATTCGTGGCCAACTGCCCGGATCCGCACAGGCCTCAGTCGCC
TGATAAGAGGAGGGCGCCCC

Downstream 100 bases:

>100_bases
AAGGGGGCAGCGGAGGGAGATGGAACGCGGAATCAGCGGAAGAGGCGGAAAAGACAGGATCGAGTCTCGCATTTCGATTC
TTTTGTCCAGCCGTTTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKRYLPVIFPVACLAMVAMVDPACAVTRPSSARSTTEQANRLREGAAKASAALWQKASAQYERGRTSGNGREKATYFRQA
EHYAQQAIAVDPRGDEGYKWLAIALGAQAEDAAVRDQIQLSRRVKENIEKALALDPHDDISLLVLSRWHYKVASLKPWTR
GVVKLVYGGLPQASMEKAELLLLRAIAIRDRIVHRYSLAKVYYYMGRREAAVQQLRLALKLPVTIPEETEDLEKARRKLV
SW

Sequences:

>Translated_242_residues
MKRYLPVIFPVACLAMVAMVDPACAVTRPSSARSTTEQANRLREGAAKASAALWQKASAQYERGRTSGNGREKATYFRQA
EHYAQQAIAVDPRGDEGYKWLAIALGAQAEDAAVRDQIQLSRRVKENIEKALALDPHDDISLLVLSRWHYKVASLKPWTR
GVVKLVYGGLPQASMEKAELLLLRAIAIRDRIVHRYSLAKVYYYMGRREAAVQQLRLALKLPVTIPEETEDLEKARRKLV
SW
>Mature_242_residues
MKRYLPVIFPVACLAMVAMVDPACAVTRPSSARSTTEQANRLREGAAKASAALWQKASAQYERGRTSGNGREKATYFRQA
EHYAQQAIAVDPRGDEGYKWLAIALGAQAEDAAVRDQIQLSRRVKENIEKALALDPHDDISLLVLSRWHYKVASLKPWTR
GVVKLVYGGLPQASMEKAELLLLRAIAIRDRIVHRYSLAKVYYYMGRREAAVQQLRLALKLPVTIPEETEDLEKARRKLV
SW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI25145534, Length=197, Percent_Identity=24.8730964467005, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17554948, Length=188, Percent_Identity=25.531914893617, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27245; Mature: 27245

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYLPVIFPVACLAMVAMVDPACAVTRPSSARSTTEQANRLREGAAKASAALWQKASAQ
CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YERGRTSGNGREKATYFRQAEHYAQQAIAVDPRGDEGYKWLAIALGAQAEDAAVRDQIQL
HHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHH
SRRVKENIEKALALDPHDDISLLVLSRWHYKVASLKPWTRGVVKLVYGGLPQASMEKAEL
HHHHHHHHHHHHCCCCCCCHHHEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHH
LLLRAIAIRDRIVHRYSLAKVYYYMGRREAAVQQLRLALKLPVTIPEETEDLEKARRKLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
SW
CC
>Mature Secondary Structure
MKRYLPVIFPVACLAMVAMVDPACAVTRPSSARSTTEQANRLREGAAKASAALWQKASAQ
CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YERGRTSGNGREKATYFRQAEHYAQQAIAVDPRGDEGYKWLAIALGAQAEDAAVRDQIQL
HHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHH
SRRVKENIEKALALDPHDDISLLVLSRWHYKVASLKPWTRGVVKLVYGGLPQASMEKAEL
HHHHHHHHHHHHCCCCCCCHHHEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHH
LLLRAIAIRDRIVHRYSLAKVYYYMGRREAAVQQLRLALKLPVTIPEETEDLEKARRKLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
SW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA