| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581128
Identifier: 118581128
GI number: 118581128
Start: 2965515
End: 2967926
Strand: Reverse
Name: 118581128
Synonym: Ppro_2718
Alternate gene names: NA
Gene position: 2967926-2965515 (Counterclockwise)
Preceding gene: 118581129
Following gene: 118581127
Centisome position: 74.05
GC content: 59.74
Gene sequence:
>2412_bases ATGTTTGAAACGGGTAAACAGCATTCAGCGCCATTTGTCAGGACTGTAAGAGGATGCGCCCTTTTCGCGGCCGCCATCGC CTGCGCGGCCTGGGCGGGGCTGGCGCTGGAGATGCCCTGGCTCGCCAGCCTGGGGGAGTCGCTGGTTCCCATGGCGCCGA GCACAGCGCTGCTGTTTATCCTCTACGCCGGGGTGATTCTGCTTGCCACGCGCGGTACGCCGGGACGGCGTCAGGGGCAA ATTTTGCTGAGTATCGTCCTGGTGTGTGGGATGATCGCCACAACGCTGCTTGTCCTCTCTCTGAACGGTGTCCACCCCAC TATCGAACACCTTGGCGTCACGATGCTTGATACATTGGGCGATACGCCGCTGGGACACATGTCGCCCGTCACCGCCTTCA GCTTTATAACGGTTGCATTTTCTCTGTTCGGGAGGCTGACCGCATCTCCGGAACAGCGCCTTCAGGCAAAAATCTCATTC TGCTTGGCCCTGTCGCTGGTGGCGGGCTGTGCCGTGCTTTCCCTGGCATACCTGCTGGGAACGCCGATGCTGTACGGCGG CGGCATGATTCCTCCGGCCGCGCCCACGAGCCTTGCCTTCATGGTGCTTGGCCTTGCGCTGGCCTTCCTCTCCCTCCCCA TCGCCTGGCCCAACGCCGTCGAATCAGGTCTGGAAGGAAAAGGTTCGCCACTGGCGCTTGCTCTTGTGTTCACCCTGTTG GTGGCCGGTATTGTGAGTACCGGTTTCTTCTATCACCACAAACATGAAAAGCTGCATCTGAAGGCGATGGAAAACCAGAT TGCCGCCATTGCCGATCTGAAACTGTCCGAGATCACATTTTACCGCGCGGAACGTCTGATCGACGCCAGCACCTATCACA ATAACCGCTCCTTTGCGCTCATCGTACGGTCGTTTCTGCGAACCGCTCCGGACCGGCGGGCAGGGCATGACCTGAACATC TGGCTTGCGGCTCTCAAGGCGAGCAGGAACTACGACGGCATTTTTCTGCTGGATGTTCAAGGCATGAATCCGCTTTTCCT GTCCGGGCATGGGCAGCAGCCTTCCGGTTACCTGGCCGGACAGGCCCGTCTGGCGCTGGAATCGAACCGAGTCGTCTTCA CCGATTTTTACCGCGACGCGGCTGACGGCGCAATTCACCTGTGCGTCATGGTTCCGCTCTCTGATCCGCTTGCCCCCGGC CGCGCTCTGGCCGTGCTTGCGCTCAGGATCGATCCGGGGCGCTATCTGTATCCTCTCCTCAAACGTTGGCCCCTGGAGAG CGCTTCCGGCGAGACGGCGCTGGTGCGCAGGGACGGCGCCGACGTACTCTTTCTAAGCGAACTCCGTTTTCACAGGGATG CGGCACTGAAACTTAAGACTCCCCTGAAACAGGTCGAGGCCCCCGAGGTGATGGCGGTATCGGGGCGGAGCGGAATAGTG CGGGGGATCAATTTTCACCATGTTCCGGTGGTGGCCGCGCTGCGGCCGGTTCCCCATACCCCCTGGCATCTCATGGCGCG CGTGGATCTCGCCGAGATCTACGCGCCGCTGCGGGAGAGGCTGTGGATTACCGTGGCCCTGGAGTTCGTCCTGCTGCTGA GCGCCGCGATTGGCGTATGGTTTGTCTGGAAACAGCGCAACCTGGCGCATTTCAGGCGCCTGGAACGGGACGCCCGGCTG AACAGGGAGCGGTTGCAATGTCTGGTGAATGTCCTGCAGTATCAGGCGCTTGATATTAAGGACCTGCTGGATTACGCCCT GTCCGAAACGCTCAGGCTGACATCCAGCAGCTACGGATATATCTACTGTTATGACGAGGAAAAACAGCGCTTTATCATTA ATTCATGGTCGCACGACGTGATGCCGGCCTGCACGGTTATGGACCCGCACTCCGAATACGATCTGGAAAAGACCGGCATC TGGGGAGAAGCGGTCAGACAGCGCAAGCCGATTGTGGTTAACGATTTTTCAGAACCCAACCCCCTGCGGAAAGGCTATCC CGAGGGGCATGTGCACCTGACCAGTTTTCTGACCCTGCCGATCGTCGATCAGGGCAGGATCGTGGCCGTGGTGGGGGTGG CGAACAAGGAAACCGGCTATGACGACGCCGATGTGACGCTGCTTTCGCTGCTGATGGACTCGGTCTGGAAAGGCGCCGAA CGGAAGCGGATGGAAGCCGCCCTGCTGGAGAGCGAGGAGCGTGTCCGGTTGGCGGTCACGTCCTCCAGCCTGGGACTGTA CGATTTGGATCTGCGGACCGGCAGTGTCATTGTCAATCCGGAGTATGCACGCATTTTTGGATACGAGCCGGACGAATTTG AAGAGAGCTACGCCCTCTGGTATGAACAACTGCACCCCGACGACGCCGCTCCGGTCAGTAAGGTGTATGAGGAGTCAGCG TCGTCCGGTTAG
Upstream 100 bases:
>100_bases GGGCTCTACCTTTACGATCCATCTTCCTCTCGGCTATCTGGCCGAAACGGTTTGAGCAGGAAAACGTCGCCGGCGCCACT TCACTGAAAGAAAATGACAC
Downstream 100 bases:
>100_bases GTCTTTGCATGGTTCTTTGAGAATGTAAAAAAGTAACAAAATCAGCGTGATGCCACATTTTTTTTGCTTGACTTTTAGTA AAAAATTGGCGGGCCACCAT
Product: putative PAS/PAC sensor protein
Products: NA
Alternate protein names: Multi-Sensor Signal Transduction Histidine Kinase; Signal Transduction Histidine Kinase; PAS/PAC Sensor Protein; Two-Component Hybrid Sensor And Regulator; PAS/PAC Sensor Signal Transduction Histidine Kinase; Sensory Transduction Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; PAS Sensor Protein; Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase; Metal Dependent Phosphohydrolase; Multisensor Signal Transduction Histidine Kinase; PAS Fold-4 Domain Protein; Diguanylate Cyclase With Pas/Pac Sensor; Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; GAF Sensor Signal Transduction Histidine Kinase; Sensory Box Histidine Kinase; Two Component Sensor Histidine Kinase; Hybrid Sensory Kinase; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Signal Transduction Protein; Multi-Sensor Protein; EAL And GGDEF Domain-Containing Protein; PAS Domain-Containing Protein; Signaling Protein; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Diguanylate Cyclase With GAF Sensor
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MFETGKQHSAPFVRTVRGCALFAAAIACAAWAGLALEMPWLASLGESLVPMAPSTALLFILYAGVILLATRGTPGRRQGQ ILLSIVLVCGMIATTLLVLSLNGVHPTIEHLGVTMLDTLGDTPLGHMSPVTAFSFITVAFSLFGRLTASPEQRLQAKISF CLALSLVAGCAVLSLAYLLGTPMLYGGGMIPPAAPTSLAFMVLGLALAFLSLPIAWPNAVESGLEGKGSPLALALVFTLL VAGIVSTGFFYHHKHEKLHLKAMENQIAAIADLKLSEITFYRAERLIDASTYHNNRSFALIVRSFLRTAPDRRAGHDLNI WLAALKASRNYDGIFLLDVQGMNPLFLSGHGQQPSGYLAGQARLALESNRVVFTDFYRDAADGAIHLCVMVPLSDPLAPG RALAVLALRIDPGRYLYPLLKRWPLESASGETALVRRDGADVLFLSELRFHRDAALKLKTPLKQVEAPEVMAVSGRSGIV RGINFHHVPVVAALRPVPHTPWHLMARVDLAEIYAPLRERLWITVALEFVLLLSAAIGVWFVWKQRNLAHFRRLERDARL NRERLQCLVNVLQYQALDIKDLLDYALSETLRLTSSSYGYIYCYDEEKQRFIINSWSHDVMPACTVMDPHSEYDLEKTGI WGEAVRQRKPIVVNDFSEPNPLRKGYPEGHVHLTSFLTLPIVDQGRIVAVVGVANKETGYDDADVTLLSLLMDSVWKGAE RKRMEAALLESEERVRLAVTSSSLGLYDLDLRTGSVIVNPEYARIFGYEPDEFEESYALWYEQLHPDDAAPVSKVYEESA SSG
Sequences:
>Translated_803_residues MFETGKQHSAPFVRTVRGCALFAAAIACAAWAGLALEMPWLASLGESLVPMAPSTALLFILYAGVILLATRGTPGRRQGQ ILLSIVLVCGMIATTLLVLSLNGVHPTIEHLGVTMLDTLGDTPLGHMSPVTAFSFITVAFSLFGRLTASPEQRLQAKISF CLALSLVAGCAVLSLAYLLGTPMLYGGGMIPPAAPTSLAFMVLGLALAFLSLPIAWPNAVESGLEGKGSPLALALVFTLL VAGIVSTGFFYHHKHEKLHLKAMENQIAAIADLKLSEITFYRAERLIDASTYHNNRSFALIVRSFLRTAPDRRAGHDLNI WLAALKASRNYDGIFLLDVQGMNPLFLSGHGQQPSGYLAGQARLALESNRVVFTDFYRDAADGAIHLCVMVPLSDPLAPG RALAVLALRIDPGRYLYPLLKRWPLESASGETALVRRDGADVLFLSELRFHRDAALKLKTPLKQVEAPEVMAVSGRSGIV RGINFHHVPVVAALRPVPHTPWHLMARVDLAEIYAPLRERLWITVALEFVLLLSAAIGVWFVWKQRNLAHFRRLERDARL NRERLQCLVNVLQYQALDIKDLLDYALSETLRLTSSSYGYIYCYDEEKQRFIINSWSHDVMPACTVMDPHSEYDLEKTGI WGEAVRQRKPIVVNDFSEPNPLRKGYPEGHVHLTSFLTLPIVDQGRIVAVVGVANKETGYDDADVTLLSLLMDSVWKGAE RKRMEAALLESEERVRLAVTSSSLGLYDLDLRTGSVIVNPEYARIFGYEPDEFEESYALWYEQLHPDDAAPVSKVYEESA SSG >Mature_803_residues MFETGKQHSAPFVRTVRGCALFAAAIACAAWAGLALEMPWLASLGESLVPMAPSTALLFILYAGVILLATRGTPGRRQGQ ILLSIVLVCGMIATTLLVLSLNGVHPTIEHLGVTMLDTLGDTPLGHMSPVTAFSFITVAFSLFGRLTASPEQRLQAKISF CLALSLVAGCAVLSLAYLLGTPMLYGGGMIPPAAPTSLAFMVLGLALAFLSLPIAWPNAVESGLEGKGSPLALALVFTLL VAGIVSTGFFYHHKHEKLHLKAMENQIAAIADLKLSEITFYRAERLIDASTYHNNRSFALIVRSFLRTAPDRRAGHDLNI WLAALKASRNYDGIFLLDVQGMNPLFLSGHGQQPSGYLAGQARLALESNRVVFTDFYRDAADGAIHLCVMVPLSDPLAPG RALAVLALRIDPGRYLYPLLKRWPLESASGETALVRRDGADVLFLSELRFHRDAALKLKTPLKQVEAPEVMAVSGRSGIV RGINFHHVPVVAALRPVPHTPWHLMARVDLAEIYAPLRERLWITVALEFVLLLSAAIGVWFVWKQRNLAHFRRLERDARL NRERLQCLVNVLQYQALDIKDLLDYALSETLRLTSSSYGYIYCYDEEKQRFIINSWSHDVMPACTVMDPHSEYDLEKTGI WGEAVRQRKPIVVNDFSEPNPLRKGYPEGHVHLTSFLTLPIVDQGRIVAVVGVANKETGYDDADVTLLSLLMDSVWKGAE RKRMEAALLESEERVRLAVTSSSLGLYDLDLRTGSVIVNPEYARIFGYEPDEFEESYALWYEQLHPDDAAPVSKVYEESA SSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88496; Mature: 88496
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50112 PAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFETGKQHSAPFVRTVRGCALFAAAIACAAWAGLALEMPWLASLGESLVPMAPSTALLFI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHH LYAGVILLATRGTPGRRQGQILLSIVLVCGMIATTLLVLSLNGVHPTIEHLGVTMLDTLG HHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCC DTPLGHMSPVTAFSFITVAFSLFGRLTASPEQRLQAKISFCLALSLVAGCAVLSLAYLLG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPMLYGGGMIPPAAPTSLAFMVLGLALAFLSLPIAWPNAVESGLEGKGSPLALALVFTLL CCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHH VAGIVSTGFFYHHKHEKLHLKAMENQIAAIADLKLSEITFYRAERLIDASTYHNNRSFAL HHHHHHHCHHEECCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHH IVRSFLRTAPDRRAGHDLNIWLAALKASRNYDGIFLLDVQGMNPLFLSGHGQQPSGYLAG HHHHHHHCCCCCCCCCCHHHHHEEHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCEECC QARLALESNRVVFTDFYRDAADGAIHLCVMVPLSDPLAPGRALAVLALRIDPGRYLYPLL CEEEEEECCCEEEEECHHCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHH KRWPLESASGETALVRRDGADVLFLSELRFHRDAALKLKTPLKQVEAPEVMAVSGRSGIV HHCCCCCCCCCEEEEEECCCCEEEEHHHHHCCCCCEEECCCHHHCCCCCEEEECCCCCEE RGINFHHVPVVAALRPVPHTPWHLMARVDLAEIYAPLRERLWITVALEFVLLLSAAIGVW ECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE FVWKQRNLAHFRRLERDARLNRERLQCLVNVLQYQALDIKDLLDYALSETLRLTSSSYGY EEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCE IYCYDEEKQRFIINSWSHDVMPACTVMDPHSEYDLEKTGIWGEAVRQRKPIVVNDFSEPN EEEEECCCCEEEEECCCCCCCCEEEEECCCCCCCCHHCCCCHHHHHCCCCEEEECCCCCC PLRKGYPEGHVHLTSFLTLPIVDQGRIVAVVGVANKETGYDDADVTLLSLLMDSVWKGAE CHHCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHH RKRMEAALLESEERVRLAVTSSSLGLYDLDLRTGSVIVNPEYARIFGYEPDEFEESYALW HHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCEEEECCCHHEEECCCCHHHHHHHHHH YEQLHPDDAAPVSKVYEESASSG HHHHCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MFETGKQHSAPFVRTVRGCALFAAAIACAAWAGLALEMPWLASLGESLVPMAPSTALLFI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHH LYAGVILLATRGTPGRRQGQILLSIVLVCGMIATTLLVLSLNGVHPTIEHLGVTMLDTLG HHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCC DTPLGHMSPVTAFSFITVAFSLFGRLTASPEQRLQAKISFCLALSLVAGCAVLSLAYLLG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPMLYGGGMIPPAAPTSLAFMVLGLALAFLSLPIAWPNAVESGLEGKGSPLALALVFTLL CCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHH VAGIVSTGFFYHHKHEKLHLKAMENQIAAIADLKLSEITFYRAERLIDASTYHNNRSFAL HHHHHHHCHHEECCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHH IVRSFLRTAPDRRAGHDLNIWLAALKASRNYDGIFLLDVQGMNPLFLSGHGQQPSGYLAG HHHHHHHCCCCCCCCCCHHHHHEEHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCEECC QARLALESNRVVFTDFYRDAADGAIHLCVMVPLSDPLAPGRALAVLALRIDPGRYLYPLL CEEEEEECCCEEEEECHHCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHH KRWPLESASGETALVRRDGADVLFLSELRFHRDAALKLKTPLKQVEAPEVMAVSGRSGIV HHCCCCCCCCCEEEEEECCCCEEEEHHHHHCCCCCEEECCCHHHCCCCCEEEECCCCCEE RGINFHHVPVVAALRPVPHTPWHLMARVDLAEIYAPLRERLWITVALEFVLLLSAAIGVW ECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE FVWKQRNLAHFRRLERDARLNRERLQCLVNVLQYQALDIKDLLDYALSETLRLTSSSYGY EEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCE IYCYDEEKQRFIINSWSHDVMPACTVMDPHSEYDLEKTGIWGEAVRQRKPIVVNDFSEPN EEEEECCCCEEEEECCCCCCCCEEEEECCCCCCCCHHCCCCHHHHHCCCCEEEECCCCCC PLRKGYPEGHVHLTSFLTLPIVDQGRIVAVVGVANKETGYDDADVTLLSLLMDSVWKGAE CHHCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHH RKRMEAALLESEERVRLAVTSSSLGLYDLDLRTGSVIVNPEYARIFGYEPDEFEESYALW HHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCEEEECCCHHEEECCCCHHHHHHHHHH YEQLHPDDAAPVSKVYEESASSG HHHHCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA