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The map label for this gene is arnC [H]

Identifier: 118581103

GI number: 118581103

Start: 2932588

End: 2933409

Strand: Reverse

Name: arnC [H]

Synonym: Ppro_2693

Alternate gene names: 118581103

Gene position: 2933409-2932588 (Counterclockwise)

Preceding gene: 118581104

Following gene: 118581102

Centisome position: 73.19

GC content: 57.42

Gene sequence:

>822_bases
ATGCACCGCGAGAACCAACTCTACGGAGAGGGGGGGACAATGATTTCAGTCGTTATTGCGGCATATAACGAGGAGCGGCG
GCTTCCCGATACATTGAGCAGGATTGCGGCGTATTTGAACCGCCAGGGGGTGTCGTTCGAAATAATCGTCGTGGACGATG
GCAGCACTGACCGTACCTGTGAGGTTTCACGGCATATCTCCGCTTGCATTCCCACCGTTTCGATCATCAGGTACGAGAAA
AACAGGGGCAAGGGGTACGCGCTTCGGACCGGCGTTCTGTCATCGCGAGGAGATATGGTGCTTCTTACGGACGCAGATCT
CTCCACGCCGATCGAAGAATTGTCCCGGTTGTCACCCTTGCTGGAGCACGAGGAGTTTGATGTAGCAATCGGTAGCCGTG
CCCTTGAACTGAGCCGGATCGTCAGGAGGCAGCCCTGGTGGAGGCAAGGCATGGGACGAATCTTCAACAGGGTTGTCCGC
ATGTTCGTTCTGGACGGCTTCGGTGACACCCAATGCGGATTCAAACTGTTTCGGGGCAGCGTGGCGCGGGATCTGTTTGG
AAGTGCGCGAATCAACCGCTTCGCCTTTGACGTGGAGATCCTAGCGCTGGCATTGAAGCGCTGCTACCGTGTGGTCGAGG
TACCCATCACCTGGGCCAACTCACCCGCATCCACGGTACATCCATTGCTGGATTCCTTGCGTATGCTGAGGGATCTCGTC
AGGATCCGGATGGCACTCAGGGGGGGGCAGCGACAGGTTGCCGTGCCGGTGATGTCGATGAGGGCGAACGGGAAGTGTTG
CCTTGCGCGAAGTCACGGATAA

Upstream 100 bases:

>100_bases
TTCAATTCCGAGACAGGCATGGAGTGGAAGGAGTATCACTGATTATCCCCCCTTAATGCTTGGACTTTTTTTCATGGTAG
AATGGTGAAACAGTGCCTGT

Downstream 100 bases:

>100_bases
GCGCTGCTGTCGAATAGTATAATCCAGGAGGGGTGGGTATATGGAAGAACTGGGAAAACGGCTTGTCGTAGAGGGCAAGA
TTTCCGAGCAGCAGCTTGAG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MHRENQLYGEGGTMISVVIAAYNEERRLPDTLSRIAAYLNRQGVSFEIIVVDDGSTDRTCEVSRHISACIPTVSIIRYEK
NRGKGYALRTGVLSSRGDMVLLTDADLSTPIEELSRLSPLLEHEEFDVAIGSRALELSRIVRRQPWWRQGMGRIFNRVVR
MFVLDGFGDTQCGFKLFRGSVARDLFGSARINRFAFDVEILALALKRCYRVVEVPITWANSPASTVHPLLDSLRMLRDLV
RIRMALRGGQRQVAVPVMSMRANGKCCLARSHG

Sequences:

>Translated_273_residues
MHRENQLYGEGGTMISVVIAAYNEERRLPDTLSRIAAYLNRQGVSFEIIVVDDGSTDRTCEVSRHISACIPTVSIIRYEK
NRGKGYALRTGVLSSRGDMVLLTDADLSTPIEELSRLSPLLEHEEFDVAIGSRALELSRIVRRQPWWRQGMGRIFNRVVR
MFVLDGFGDTQCGFKLFRGSVARDLFGSARINRFAFDVEILALALKRCYRVVEVPITWANSPASTVHPLLDSLRMLRDLV
RIRMALRGGQRQVAVPVMSMRANGKCCLARSHG
>Mature_273_residues
MHRENQLYGEGGTMISVVIAAYNEERRLPDTLSRIAAYLNRQGVSFEIIVVDDGSTDRTCEVSRHISACIPTVSIIRYEK
NRGKGYALRTGVLSSRGDMVLLTDADLSTPIEELSRLSPLLEHEEFDVAIGSRALELSRIVRRQPWWRQGMGRIFNRVVR
MFVLDGFGDTQCGFKLFRGSVARDLFGSARINRFAFDVEILALALKRCYRVVEVPITWANSPASTVHPLLDSLRMLRDLV
RIRMALRGGQRQVAVPVMSMRANGKCCLARSHG

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI7019323, Length=251, Percent_Identity=36.2549800796813, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI215276969, Length=236, Percent_Identity=33.0508474576271, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI4503363, Length=207, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1788588, Length=231, Percent_Identity=28.1385281385281, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787259, Length=92, Percent_Identity=34.7826086956522, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI25146207, Length=253, Percent_Identity=36.7588932806324, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71999402, Length=209, Percent_Identity=25.8373205741627, Blast_Score=74, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6325029, Length=279, Percent_Identity=32.9749103942652, Blast_Score=129, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24582769, Length=252, Percent_Identity=36.1111111111111, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI24585265, Length=211, Percent_Identity=25.5924170616114, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 30728; Mature: 30728

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRENQLYGEGGTMISVVIAAYNEERRLPDTLSRIAAYLNRQGVSFEIIVVDDGSTDRTC
CCCCCCEECCCCCEEEHHEEHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHH
EVSRHISACIPTVSIIRYEKNRGKGYALRTGVLSSRGDMVLLTDADLSTPIEELSRLSPL
HHHHHHHHHHCHHHEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHH
LEHEEFDVAIGSRALELSRIVRRQPWWRQGMGRIFNRVVRMFVLDGFGDTQCGFKLFRGS
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VARDLFGSARINRFAFDVEILALALKRCYRVVEVPITWANSPASTVHPLLDSLRMLRDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHH
RIRMALRGGQRQVAVPVMSMRANGKCCLARSHG
HHHHHHCCCCCEEEEEHEEECCCCCEEEECCCC
>Mature Secondary Structure
MHRENQLYGEGGTMISVVIAAYNEERRLPDTLSRIAAYLNRQGVSFEIIVVDDGSTDRTC
CCCCCCEECCCCCEEEHHEEHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHH
EVSRHISACIPTVSIIRYEKNRGKGYALRTGVLSSRGDMVLLTDADLSTPIEELSRLSPL
HHHHHHHHHHCHHHEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHH
LEHEEFDVAIGSRALELSRIVRRQPWWRQGMGRIFNRVVRMFVLDGFGDTQCGFKLFRGS
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VARDLFGSARINRFAFDVEILALALKRCYRVVEVPITWANSPASTVHPLLDSLRMLRDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHH
RIRMALRGGQRQVAVPVMSMRANGKCCLARSHG
HHHHHHCCCCCEEEEEHEEECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA