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The map label for this gene is tnpR [H]

Identifier: 118580994

GI number: 118580994

Start: 2799500

End: 2800057

Strand: Reverse

Name: tnpR [H]

Synonym: Ppro_2582

Alternate gene names: 118580994

Gene position: 2800057-2799500 (Counterclockwise)

Preceding gene: 118580996

Following gene: 118580991

Centisome position: 69.86

GC content: 50.9

Gene sequence:

>558_bases
ATGGCTGTAATCGGGTATGCAAGGGTCAGTACTCAAGAACAGGACTTGGCCGTTCAGTTAGAGCAGCTCCGGGCCGCTGG
TGTCGACAAGGTGTACCAAGAGAAGGCAAGCGGAGCGGATGCTGATAGACCGGAGCTTGCAGCGATGCTGGATTATGTCC
GGGAAGGTGACACGGTGGTGGTTTGTAAGCTCGACAGAATCGCTAGGAGCACAAAACATCTACTGAGCATCACTGAGGAT
CTGGAAGAGAGGCACGTTGCCTTTAAGGTGCTCAACATTCAGCTTGATACCACCACATCCACTGGGAAACTTATGTTAAC
CATGCTTGGTGCAATAGCGACCTTCGAGCGTGAGATGATGCTAGAGCGACAAAGGGAAGGCATACGGGCTGCTAAGGAAG
CAGGGAAGTACAAGGGTAGGAAGGCAACTGCAATGGCGCAGTCCGAGAAGGTCATGGAGTTGATCGGGCAAGGTATGACC
AAACAAGCTATTGCTGATGAACTGAAGATCGGGGTTGCTAGCGTCTATAGGATCATGAAAGAGTGTAAAGAGAAATAG

Upstream 100 bases:

>100_bases
AGGTGTGGTGTATGTCGTCAAGACCTATCATATAAATTGACATATGGATTTTGATAGTATATTATCACAACGTCTTAAGC
GTTATTGATAGGAGAATGAT

Downstream 100 bases:

>100_bases
TATAATTAGATCAATGCGTGTTGATTATGTTTATCTTGATAGTCTCCCCAATTGATTTCTGCCATTAGTCTGACGCTCTC
GTGCTCTTTGTTATCAAGAA

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MAVIGYARVSTQEQDLAVQLEQLRAAGVDKVYQEKASGADADRPELAAMLDYVREGDTVVVCKLDRIARSTKHLLSITED
LEERHVAFKVLNIQLDTTTSTGKLMLTMLGAIATFEREMMLERQREGIRAAKEAGKYKGRKATAMAQSEKVMELIGQGMT
KQAIADELKIGVASVYRIMKECKEK

Sequences:

>Translated_185_residues
MAVIGYARVSTQEQDLAVQLEQLRAAGVDKVYQEKASGADADRPELAAMLDYVREGDTVVVCKLDRIARSTKHLLSITED
LEERHVAFKVLNIQLDTTTSTGKLMLTMLGAIATFEREMMLERQREGIRAAKEAGKYKGRKATAMAQSEKVMELIGQGMT
KQAIADELKIGVASVYRIMKECKEK
>Mature_184_residues
AVIGYARVSTQEQDLAVQLEQLRAAGVDKVYQEKASGADADRPELAAMLDYVREGDTVVVCKLDRIARSTKHLLSITEDL
EERHVAFKVLNIQLDTTTSTGKLMLTMLGAIATFEREMMLERQREGIRAAKEAGKYKGRKATAMAQSEKVMELIGQGMTK
QAIADELKIGVASVYRIMKECKEK

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=176, Percent_Identity=36.3636363636364, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787827, Length=183, Percent_Identity=32.2404371584699, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787638, Length=183, Percent_Identity=32.2404371584699, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 20555; Mature: 20424

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIGYARVSTQEQDLAVQLEQLRAAGVDKVYQEKASGADADRPELAAMLDYVREGDTVV
CCEECCHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEE
VCKLDRIARSTKHLLSITEDLEERHVAFKVLNIQLDTTTSTGKLMLTMLGAIATFEREMM
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LERQREGIRAAKEAGKYKGRKATAMAQSEKVMELIGQGMTKQAIADELKIGVASVYRIMK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ECKEK
HHHCC
>Mature Secondary Structure 
AVIGYARVSTQEQDLAVQLEQLRAAGVDKVYQEKASGADADRPELAAMLDYVREGDTVV
CEECCHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEE
VCKLDRIARSTKHLLSITEDLEERHVAFKVLNIQLDTTTSTGKLMLTMLGAIATFEREMM
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LERQREGIRAAKEAGKYKGRKATAMAQSEKVMELIGQGMTKQAIADELKIGVASVYRIMK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ECKEK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2997130 [H]