| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580989
Identifier: 118580989
GI number: 118580989
Start: 2792682
End: 2794706
Strand: Reverse
Name: 118580989
Synonym: Ppro_2577
Alternate gene names: NA
Gene position: 2794706-2792682 (Counterclockwise)
Preceding gene: 118580990
Following gene: 118580988
Centisome position: 69.73
GC content: 65.04
Gene sequence:
>2025_bases ATGAAGATCACACTCGTCTTCCCGCCATTCTACCTCCAGTCGCTCTACAACCTCCCGCCACTGGGGCTGCTCAACCTTGC CACCCTGCTCAGGGAGGGGGGGCATCAGGTCGATGTCCTGGATCTTGTCCTCGCCCTCCGCCTGAAGACGCTTAACCCCA GCTCCGCCATCTACGAAGACGCCGCCCGCATGATCCTGCGCCATGATCCCGACCTGGTGGGCTTTTCCGTGCAGTGCGCC ACCTTTCCGGCTGTCGTCCAGATCGCCCAACGGCTGAAGAAGGCCAGGCCGGAGATACGGATCGTTGCTGGCGGCCATGA CGTGACGTTCGTCGCCGAACGGACCTTGGAACGCTTTCCCTGGATCGACGCGGTGGTCAGGGGGGAGGGGGAGTTGAGCC TGTCGGAACTGGTCTCTGCCTGGGCCGTGAGAGAGGAGGGGGAGGGGATCGAGGGAATCAGCTGGCGCCGGGGAACCGAG GTGATCCGCAACCCGGACCGGCAGTTGATCAGCGACCTGGACGTGCTCCCGCTCCCGGACTACGGCTTCGTGCCCGACCT TGAAACCTACCGTGACGCCTGCGGGATTCCCCGCGCCATAGCCATCCTGGAGGTGGGGAGGGGATGCCCCCATGCCTGCG TCTACTGCTCCGAATCAATCATGTGGCGGCGGCGCACGCGCACCTTCTCCATCCCCCGCATCACCCATGAGATGCGCCGC CTGCGGGAGCGCTACGGCGCCCAGTGCTTCCTGCTGGCCTACGACCAGTTCACCGCAGACCGGCGCTTCGTGGAGGAGTT CTGCCGACGGGTCCTGGAGGAGGGGCTGAACGACACCCCCTGGTACTGCATCTCCCGGCTCGACTCCATGGATGTGGAAC TGCTGCGGCTGATGCGGGAGGCGGGGTGCGAGTCCATGTGCTACGGCATCGACTCGGGGTCGCGGCGCACCCTGGCATTC ATCGGCAAGCAGATCGATGAAACCATCCTCTACCAGCGGGTCAGGGAGACCACGGATGAGGGAATGGTGCCGACGCTCAG CTTCGTGATAGGTTTCCCCGAGGAACAGCGGGAGGATGTGGACCAGACCCTCTTTCTGGCGCTCAGGGCCGGAATCCAGG GGAACTGCAACCCGCTGATCCAGCTCCCCACGGTGCTCCCCGGCACCGAGTTGCACCGGCGCTACGTGGATTGTCTGGTG CGCGAGGCTGACAGCTACTTCTCCCTCGGCCTGGAATTCCATGACGCCCGGCGCCTGGAAGAGGATTCCCGGCTGATCGA GTCAGACCCGTTCCTGTTCAGCGGATTTTACAATCTCCCCTGCGCCGGTCTCGGGCTGGACGAACTGGACCGCCTGTCCC GCTTTTTCCCGCTGCTCGTCAACCTGTACCCCAAGACGTTTCTGCTCCTGGCCATGGCGCTGGGGGAGCCGCCCAGCCGG CTTTTTTCCCGCCTGCTGGGTTATGTCGCCGTCGCGGAGGCGCGGACGGTCCTCTCCCTCACCCCCGAGGAGTGCCGTTG CCATGTTCCCTCTTTCTGCGGCAAAGCGCTTGCCGAGGCCCGTGTCGACGGCTCCTGGTGCCATCTGCCCGAAATCGTCC TCTACGAAACCCAGTCCCTGGAGACGGCCATCGTCCCGCTGAACCGGGCGACCGCCACCGCCGACCTCTGCCGCCTGGCG GAGCTGCTTCCCCGGCGGGACAGGGGCGTTGTGGTCAGGGAATTTTCCCACAACCTGCCCGGCATCGTCGACGACCTGAA GGAGGGGATCTTCCGGGAGAGCTATCCCCAGGAGCCGACGCTGCTGGTCTTCTCCGCCGGGGAGAACGGGGTGGAGGTGA CCCAGATCAACGAGTTCGGCCGGGATCTGCTGGAACTGTGCGACGGTTCGGCCCGGCTGGAGGAGATCGCCCGCGACCTG TACCAACGCTACGGCTCCGGCATGGGGAGCGAAGGCTTCATGGACGAGTGTCGGGAAGCGATGGAGACGCTCAGGGAGAT GGATCTGGTGCGGCTGCCGTCATAG
Upstream 100 bases:
>100_bases GACGGTGGCCAATCCCTTCCTTGCAAAGCCGCCGTTGCATGGTAGTCTGGGAACATCGTTACCATCCTGCAATTAATTGC CGCGTCAGGGATATGGTGCC
Downstream 100 bases:
>100_bases CGGGGTTCGCATCGCAAAAGATGTCGTTGCATTTCCCCGAATCCTTCAGGGAGTCGGGTTTCGTCATGGGAAGGAGGTGA TTCTATGCTGAAGGTCAGGA
Product: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 674; Mature: 674
Protein sequence:
>674_residues MKITLVFPPFYLQSLYNLPPLGLLNLATLLREGGHQVDVLDLVLALRLKTLNPSSAIYEDAARMILRHDPDLVGFSVQCA TFPAVVQIAQRLKKARPEIRIVAGGHDVTFVAERTLERFPWIDAVVRGEGELSLSELVSAWAVREEGEGIEGISWRRGTE VIRNPDRQLISDLDVLPLPDYGFVPDLETYRDACGIPRAIAILEVGRGCPHACVYCSESIMWRRRTRTFSIPRITHEMRR LRERYGAQCFLLAYDQFTADRRFVEEFCRRVLEEGLNDTPWYCISRLDSMDVELLRLMREAGCESMCYGIDSGSRRTLAF IGKQIDETILYQRVRETTDEGMVPTLSFVIGFPEEQREDVDQTLFLALRAGIQGNCNPLIQLPTVLPGTELHRRYVDCLV READSYFSLGLEFHDARRLEEDSRLIESDPFLFSGFYNLPCAGLGLDELDRLSRFFPLLVNLYPKTFLLLAMALGEPPSR LFSRLLGYVAVAEARTVLSLTPEECRCHVPSFCGKALAEARVDGSWCHLPEIVLYETQSLETAIVPLNRATATADLCRLA ELLPRRDRGVVVREFSHNLPGIVDDLKEGIFRESYPQEPTLLVFSAGENGVEVTQINEFGRDLLELCDGSARLEEIARDL YQRYGSGMGSEGFMDECREAMETLREMDLVRLPS
Sequences:
>Translated_674_residues MKITLVFPPFYLQSLYNLPPLGLLNLATLLREGGHQVDVLDLVLALRLKTLNPSSAIYEDAARMILRHDPDLVGFSVQCA TFPAVVQIAQRLKKARPEIRIVAGGHDVTFVAERTLERFPWIDAVVRGEGELSLSELVSAWAVREEGEGIEGISWRRGTE VIRNPDRQLISDLDVLPLPDYGFVPDLETYRDACGIPRAIAILEVGRGCPHACVYCSESIMWRRRTRTFSIPRITHEMRR LRERYGAQCFLLAYDQFTADRRFVEEFCRRVLEEGLNDTPWYCISRLDSMDVELLRLMREAGCESMCYGIDSGSRRTLAF IGKQIDETILYQRVRETTDEGMVPTLSFVIGFPEEQREDVDQTLFLALRAGIQGNCNPLIQLPTVLPGTELHRRYVDCLV READSYFSLGLEFHDARRLEEDSRLIESDPFLFSGFYNLPCAGLGLDELDRLSRFFPLLVNLYPKTFLLLAMALGEPPSR LFSRLLGYVAVAEARTVLSLTPEECRCHVPSFCGKALAEARVDGSWCHLPEIVLYETQSLETAIVPLNRATATADLCRLA ELLPRRDRGVVVREFSHNLPGIVDDLKEGIFRESYPQEPTLLVFSAGENGVEVTQINEFGRDLLELCDGSARLEEIARDL YQRYGSGMGSEGFMDECREAMETLREMDLVRLPS >Mature_674_residues MKITLVFPPFYLQSLYNLPPLGLLNLATLLREGGHQVDVLDLVLALRLKTLNPSSAIYEDAARMILRHDPDLVGFSVQCA TFPAVVQIAQRLKKARPEIRIVAGGHDVTFVAERTLERFPWIDAVVRGEGELSLSELVSAWAVREEGEGIEGISWRRGTE VIRNPDRQLISDLDVLPLPDYGFVPDLETYRDACGIPRAIAILEVGRGCPHACVYCSESIMWRRRTRTFSIPRITHEMRR LRERYGAQCFLLAYDQFTADRRFVEEFCRRVLEEGLNDTPWYCISRLDSMDVELLRLMREAGCESMCYGIDSGSRRTLAF IGKQIDETILYQRVRETTDEGMVPTLSFVIGFPEEQREDVDQTLFLALRAGIQGNCNPLIQLPTVLPGTELHRRYVDCLV READSYFSLGLEFHDARRLEEDSRLIESDPFLFSGFYNLPCAGLGLDELDRLSRFFPLLVNLYPKTFLLLAMALGEPPSR LFSRLLGYVAVAEARTVLSLTPEECRCHVPSFCGKALAEARVDGSWCHLPEIVLYETQSLETAIVPLNRATATADLCRLA ELLPRRDRGVVVREFSHNLPGIVDDLKEGIFRESYPQEPTLLVFSAGENGVEVTQINEFGRDLLELCDGSARLEEIARDL YQRYGSGMGSEGFMDECREAMETLREMDLVRLPS
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 76355; Mature: 76355
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITLVFPPFYLQSLYNLPPLGLLNLATLLREGGHQVDVLDLVLALRLKTLNPSSAIYED CEEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHH AARMILRHDPDLVGFSVQCATFPAVVQIAQRLKKARPEIRIVAGGHDVTFVAERTLERFP HHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCC WIDAVVRGEGELSLSELVSAWAVREEGEGIEGISWRRGTEVIRNPDRQLISDLDVLPLPD CHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCC YGFVPDLETYRDACGIPRAIAILEVGRGCPHACVYCSESIMWRRRTRTFSIPRITHEMRR CCCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LRERYGAQCFLLAYDQFTADRRFVEEFCRRVLEEGLNDTPWYCISRLDSMDVELLRLMRE HHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHH AGCESMCYGIDSGSRRTLAFIGKQIDETILYQRVRETTDEGMVPTLSFVIGFPEEQREDV CCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHH DQTLFLALRAGIQGNCNPLIQLPTVLPGTELHRRYVDCLVREADSYFSLGLEFHDARRLE HHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EDSRLIESDPFLFSGFYNLPCAGLGLDELDRLSRFFPLLVNLYPKTFLLLAMALGEPPSR HHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LFSRLLGYVAVAEARTVLSLTPEECRCHVPSFCGKALAEARVDGSWCHLPEIVLYETQSL HHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC ETAIVPLNRATATADLCRLAELLPRRDRGVVVREFSHNLPGIVDDLKEGIFRESYPQEPT CEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHCCCCCCCE LLVFSAGENGVEVTQINEFGRDLLELCDGSARLEEIARDLYQRYGSGMGSEGFMDECREA EEEEECCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH METLREMDLVRLPS HHHHHHCCHHCCCC >Mature Secondary Structure MKITLVFPPFYLQSLYNLPPLGLLNLATLLREGGHQVDVLDLVLALRLKTLNPSSAIYED CEEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHH AARMILRHDPDLVGFSVQCATFPAVVQIAQRLKKARPEIRIVAGGHDVTFVAERTLERFP HHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCC WIDAVVRGEGELSLSELVSAWAVREEGEGIEGISWRRGTEVIRNPDRQLISDLDVLPLPD CHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCC YGFVPDLETYRDACGIPRAIAILEVGRGCPHACVYCSESIMWRRRTRTFSIPRITHEMRR CCCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LRERYGAQCFLLAYDQFTADRRFVEEFCRRVLEEGLNDTPWYCISRLDSMDVELLRLMRE HHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHH AGCESMCYGIDSGSRRTLAFIGKQIDETILYQRVRETTDEGMVPTLSFVIGFPEEQREDV CCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHH DQTLFLALRAGIQGNCNPLIQLPTVLPGTELHRRYVDCLVREADSYFSLGLEFHDARRLE HHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EDSRLIESDPFLFSGFYNLPCAGLGLDELDRLSRFFPLLVNLYPKTFLLLAMALGEPPSR HHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LFSRLLGYVAVAEARTVLSLTPEECRCHVPSFCGKALAEARVDGSWCHLPEIVLYETQSL HHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC ETAIVPLNRATATADLCRLAELLPRRDRGVVVREFSHNLPGIVDDLKEGIFRESYPQEPT CEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHCCCCCCCE LLVFSAGENGVEVTQINEFGRDLLELCDGSARLEEIARDLYQRYGSGMGSEGFMDECREA EEEEECCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH METLREMDLVRLPS HHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]