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The map label for this gene is ynhG [H]

Identifier: 118580986

GI number: 118580986

Start: 2789218

End: 2789796

Strand: Direct

Name: ynhG [H]

Synonym: Ppro_2574

Alternate gene names: 118580986

Gene position: 2789218-2789796 (Clockwise)

Preceding gene: 118580985

Following gene: 118580992

Centisome position: 69.59

GC content: 64.42

Gene sequence:

>579_bases
ATGAACGCAGCCCCCCACCTTGCCGCCCTGATCGTTTCGATTCTTCTGGCAGCTTCCGGCCTGGCCGCGGAAGCTGCCCC
CACGGATCAACAAACAAGCCAGGATCCCGCCGCTTCCCGCCCCGCCGCACCCTATATCATTGAGATAAGCATCAGCCGCA
CCCTGCTGACCCTCTACGAGCGGCATGGTACCGGGAAAATGTTCCCCGTCGCACAATACCGGGTGGGCAGCGCCATGAGA
GGACTCACAACCTATCCCCTCGGCCCAGGCAGGGTGACCGCCATCCAGTTTGACCCCTGGTGGCACCCCACCGCCTACTC
CCGCCAGGTATTTCGGGAACGGGGCATCAGCCTCCCTCGCGCGGTCCCGCCCGGCCACCCCCTGAACTACATGGGGCCGT
TCAAGATATCCCTGTCCCACCGCACATGGAAAGGGGCCATCTACCGCATCCATGGCAACAACAACCCCAGGCGGGTGGGC
CGGCGGGTGACGGGCGGCTGCTTCGTCATGCACAACAGGGACGGACTGGAACTGGCCCGCAGGATCAGGGTGGGGACGGT
GGTGAACATCGTACCGTGA

Upstream 100 bases:

>100_bases
GGGCGGGACAGGCTCTGAAGGTGCGCGGCTCATGCTTTCAAAGGGGAGCGAATGATCCCATGACCCGAGACCGGCCGTTT
TCCAGCCCCATGCATACGCT

Downstream 100 bases:

>100_bases
GAGGGAGGACAGGCGGGAGAGAGCTTCTTGATTGAGCGGCACGCTGGCGAGGAACGCACCGGCGTGGACCAATTTCAGCT
ACATGCCATCGACTGCGCGT

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNAAPHLAALIVSILLAASGLAAEAAPTDQQTSQDPAASRPAAPYIIEISISRTLLTLYERHGTGKMFPVAQYRVGSAMR
GLTTYPLGPGRVTAIQFDPWWHPTAYSRQVFRERGISLPRAVPPGHPLNYMGPFKISLSHRTWKGAIYRIHGNNNPRRVG
RRVTGGCFVMHNRDGLELARRIRVGTVVNIVP

Sequences:

>Translated_192_residues
MNAAPHLAALIVSILLAASGLAAEAAPTDQQTSQDPAASRPAAPYIIEISISRTLLTLYERHGTGKMFPVAQYRVGSAMR
GLTTYPLGPGRVTAIQFDPWWHPTAYSRQVFRERGISLPRAVPPGHPLNYMGPFKISLSHRTWKGAIYRIHGNNNPRRVG
RRVTGGCFVMHNRDGLELARRIRVGTVVNIVP
>Mature_192_residues
MNAAPHLAALIVSILLAASGLAAEAAPTDQQTSQDPAASRPAAPYIIEISISRTLLTLYERHGTGKMFPVAQYRVGSAMR
GLTTYPLGPGRVTAIQFDPWWHPTAYSRQVFRERGISLPRAVPPGHPLNYMGPFKISLSHRTWKGAIYRIHGNNNPRRVG
RRVTGGCFVMHNRDGLELARRIRVGTVVNIVP

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=122, Percent_Identity=39.344262295082, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 21098; Mature: 21098

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAPHLAALIVSILLAASGLAAEAAPTDQQTSQDPAASRPAAPYIIEISISRTLLTLYE
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHH
RHGTGKMFPVAQYRVGSAMRGLTTYPLGPGRVTAIQFDPWWHPTAYSRQVFRERGISLPR
HCCCCCCCCHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCC
AVPPGHPLNYMGPFKISLSHRTWKGAIYRIHGNNNPRRVGRRVTGGCFVMHNRDGLELAR
CCCCCCCCCCCCCEEEEECCCEECEEEEEEECCCCHHHHCCCCCCCEEEEECCCHHHHHH
RIRVGTVVNIVP
HHHHCEEEEECC
>Mature Secondary Structure
MNAAPHLAALIVSILLAASGLAAEAAPTDQQTSQDPAASRPAAPYIIEISISRTLLTLYE
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHH
RHGTGKMFPVAQYRVGSAMRGLTTYPLGPGRVTAIQFDPWWHPTAYSRQVFRERGISLPR
HCCCCCCCCHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCC
AVPPGHPLNYMGPFKISLSHRTWKGAIYRIHGNNNPRRVGRRVTGGCFVMHNRDGLELAR
CCCCCCCCCCCCCEEEEECCCEECEEEEEEECCCCHHHHCCCCCCCEEEEECCCHHHHHH
RIRVGTVVNIVP
HHHHCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]