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The map label for this gene is epsD [H]

Identifier: 118580876

GI number: 118580876

Start: 2662882

End: 2664039

Strand: Reverse

Name: epsD [H]

Synonym: Ppro_2463

Alternate gene names: 118580876

Gene position: 2664039-2662882 (Counterclockwise)

Preceding gene: 118580877

Following gene: 118580875

Centisome position: 66.47

GC content: 60.1

Gene sequence:

>1158_bases
GTGGCTTCTGTGCTTTCCGTGGACATACAGGATTCAAAAATACACACCCCCAAAATCATCCACGTGGTTATTTCCATGGT
TGTTGGCGGGGCCGAGCGGCTGGTCTATGATATGGTGCGCTATCCGGTCTTTGCCGCCAATCCCCCGGTGGTCTGCTGCA
TGGACAGCCTGGGGGAGTTGGGCGAAAAGCTGATCCGGGAGGGGTACCGGGTCTACTGCAAGGGGCGCCGCCCCGGGCTG
GATCTGGAGATGGTCACCTGGCTCAGGGACATCATCAGGCGGGAAAAGGCAGATGTGGTCCATGCCCACCAGTACTCCCC
CCTTTTCTACGCGGTGCCGGCGGCCCTGCTGGCCGGCAGGGTCAAGCTGGTCTACACCGAGCATGGCCGCTTCTACCCGG
AACGGAAGAGCTGGAAGCGAACCCTCTTCAACCCGCTGTTGGCCCTGGGGGTGGACCATCTGGTATCCATCTCCCGGGCT
ACGGCCCAGGCCATGGCCAGCTACGACAATTTTCCGCTGCGCCGGATCCGGGTCATCCATAACGGTATCGACACCACCAG
GCTCAATCCTCCCGTTGACAAGGCTGCCAAGCGGCGGGAACTGGGGCTGTGCCCAACCTGCCGAATCATCGGCACCGCCG
CCAGGCTCAACAGCATCAAGAACATCGACATGATGTTGCGGGTGCTGAAGCTGGTGGTGGAGAAAGTACCGGACACCTGT
CTGGTGATAGCGGGGCAGGGGGAGGAAGAACAGCGCCTCAAGGCTCTGGCCGTTGAACTGGGCATTGCCGATAGCGTGAA
ATTCATCGGTCTTCGCTTTGACCTTCCCGAGGTCTACCAGTTGTACGATGTGTTTCTGCTGACCTCGTTTTCCGAAGGGA
TATCGGTGACGCTGCTGGAGGCCATGGCCAGCGGGGTTCCGGCGGTGGTGACAGATGTGGGGGGGAACCGGGAAGTGGTG
GTAGAGGGAGAGACGGGGTTCATGGTAGCGGTGGATGATGATGGTGCCATGGGGGCCAGAGTCGTCCGGATGCTCGCCGA
TACGTCCTCGTCTCCCGCTGTGGGTGACCGTGCACGGGAACGGGTTGCGGCGGCATTTTCCGTTGCCGGAATGATGAACA
ATTATACCGAACTGTACGGGTGTAGTAATTTCAGGTAG

Upstream 100 bases:

>100_bases
GACACTGAAAACACTGAAAGTTTGAATGAAAGTTACCTTTCGGTGTCTTCCGTGATTTCAGTGGACACGAATCTGTTTTT
AGAAAAAGGGTGATTATTCA

Downstream 100 bases:

>100_bases
GTTGTAGCGTGCGACCAATGGAACATGGGATGATGCCTTGTCGCAAACAGTTCTCGAGGTGAGGCGATATTATGAGGCTC
AAGGATTATGAGCGGGCCGC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MASVLSVDIQDSKIHTPKIIHVVISMVVGGAERLVYDMVRYPVFAANPPVVCCMDSLGELGEKLIREGYRVYCKGRRPGL
DLEMVTWLRDIIRREKADVVHAHQYSPLFYAVPAALLAGRVKLVYTEHGRFYPERKSWKRTLFNPLLALGVDHLVSISRA
TAQAMASYDNFPLRRIRVIHNGIDTTRLNPPVDKAAKRRELGLCPTCRIIGTAARLNSIKNIDMMLRVLKLVVEKVPDTC
LVIAGQGEEEQRLKALAVELGIADSVKFIGLRFDLPEVYQLYDVFLLTSFSEGISVTLLEAMASGVPAVVTDVGGNREVV
VEGETGFMVAVDDDGAMGARVVRMLADTSSSPAVGDRARERVAAAFSVAGMMNNYTELYGCSNFR

Sequences:

>Translated_385_residues
MASVLSVDIQDSKIHTPKIIHVVISMVVGGAERLVYDMVRYPVFAANPPVVCCMDSLGELGEKLIREGYRVYCKGRRPGL
DLEMVTWLRDIIRREKADVVHAHQYSPLFYAVPAALLAGRVKLVYTEHGRFYPERKSWKRTLFNPLLALGVDHLVSISRA
TAQAMASYDNFPLRRIRVIHNGIDTTRLNPPVDKAAKRRELGLCPTCRIIGTAARLNSIKNIDMMLRVLKLVVEKVPDTC
LVIAGQGEEEQRLKALAVELGIADSVKFIGLRFDLPEVYQLYDVFLLTSFSEGISVTLLEAMASGVPAVVTDVGGNREVV
VEGETGFMVAVDDDGAMGARVVRMLADTSSSPAVGDRARERVAAAFSVAGMMNNYTELYGCSNFR
>Mature_384_residues
ASVLSVDIQDSKIHTPKIIHVVISMVVGGAERLVYDMVRYPVFAANPPVVCCMDSLGELGEKLIREGYRVYCKGRRPGLD
LEMVTWLRDIIRREKADVVHAHQYSPLFYAVPAALLAGRVKLVYTEHGRFYPERKSWKRTLFNPLLALGVDHLVSISRAT
AQAMASYDNFPLRRIRVIHNGIDTTRLNPPVDKAAKRRELGLCPTCRIIGTAARLNSIKNIDMMLRVLKLVVEKVPDTCL
VIAGQGEEEQRLKALAVELGIADSVKFIGLRFDLPEVYQLYDVFLLTSFSEGISVTLLEAMASGVPAVVTDVGGNREVVV
EGETGFMVAVDDDGAMGARVVRMLADTSSSPAVGDRARERVAAAFSVAGMMNNYTELYGCSNFR

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=206, Percent_Identity=31.0679611650485, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42491; Mature: 42360

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVLSVDIQDSKIHTPKIIHVVISMVVGGAERLVYDMVRYPVFAANPPVVCCMDSLGEL
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCEEECCCCEEEEHHHHHHH
GEKLIREGYRVYCKGRRPGLDLEMVTWLRDIIRREKADVVHAHQYSPLFYAVPAALLAGR
HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCC
VKLVYTEHGRFYPERKSWKRTLFNPLLALGVDHLVSISRATAQAMASYDNFPLRRIRVIH
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
NGIDTTRLNPPVDKAAKRRELGLCPTCRIIGTAARLNSIKNIDMMLRVLKLVVEKVPDTC
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE
LVIAGQGEEEQRLKALAVELGIADSVKFIGLRFDLPEVYQLYDVFLLTSFSEGISVTLLE
EEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHH
AMASGVPAVVTDVGGNREVVVEGETGFMVAVDDDGAMGARVVRMLADTSSSPAVGDRARE
HHHCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHH
RVAAAFSVAGMMNNYTELYGCSNFR
HHHHHHHHHHHHHCHHHHCCCCCCC
>Mature Secondary Structure 
ASVLSVDIQDSKIHTPKIIHVVISMVVGGAERLVYDMVRYPVFAANPPVVCCMDSLGEL
CCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCEEECCCCEEEEHHHHHHH
GEKLIREGYRVYCKGRRPGLDLEMVTWLRDIIRREKADVVHAHQYSPLFYAVPAALLAGR
HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCC
VKLVYTEHGRFYPERKSWKRTLFNPLLALGVDHLVSISRATAQAMASYDNFPLRRIRVIH
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
NGIDTTRLNPPVDKAAKRRELGLCPTCRIIGTAARLNSIKNIDMMLRVLKLVVEKVPDTC
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE
LVIAGQGEEEQRLKALAVELGIADSVKFIGLRFDLPEVYQLYDVFLLTSFSEGISVTLLE
EEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHH
AMASGVPAVVTDVGGNREVVVEGETGFMVAVDDDGAMGARVVRMLADTSSSPAVGDRARE
HHHCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHH
RVAAAFSVAGMMNNYTELYGCSNFR
HHHHHHHHHHHHHCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]