| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580872
Identifier: 118580872
GI number: 118580872
Start: 2658986
End: 2660458
Strand: Reverse
Name: 118580872
Synonym: Ppro_2459
Alternate gene names: NA
Gene position: 2660458-2658986 (Counterclockwise)
Preceding gene: 118580873
Following gene: 118580871
Centisome position: 66.38
GC content: 36.18
Gene sequence:
>1473_bases ATGTCATTAAAAAATTCACTCTGCGACATCAGCAAACATAGCTTGATATATATGCTTGGATGGGGGATTGCCGCTGCAAT ACGATTAGGGATGCTGCCCCTCTTCACCCGTTGCTTAGGACAACAGGATTACGGAATCATCTCTATTTTGGATAGTTCTG TTGAATTGTTACGTATACTCTGTGCGTTGGGATTCAGTTCTGCTATTGTGAGATTTTATAACGACAGTACGGATGTTTGC TTCAGGCGCACGGTTATGGCTACAGGCGCTTGTTTTTCCTTGCTTGCTACTGTTTTTTTTGGTCTTGGCATTTTTCCTTT TAGTAAACAAATCTCAGAATTCATTTTAGGAAATGGGGTAAATGTACTCTACTTTAAACTTGCATTTGCTACCATATTGC TCAATATAATTAGAAGTGTTGCTGATTCATATTTAACAGTTAATAAATACTCAGTGCAATACATTGTAATTAATACTGTT CAAGTTGTGTTCCAGTCGTCACTGAATTTATATTTAGTTGTGTTCAGAGATCTTGGTGTTACTGGAATGTTGGTAGGAAA TTTATTGGTTGCCTTTATTTTTGATGTAGGCTTGTATGCATTCGTAGCTTTTAAGAATGGCCTTGTCATTGATTTTAAGG TGATAATTCCAATGCTCAAATTTTCACTTCCTCTTGTTCCGACTGTGTTGGCTGCGGCAGCCATGCATAACTTAGATAGA TTTTTTATCAAGTTTTTCGCCTCAATGGAGGATGTTGGTCTTTATTCGCTGGCATATCAGTTTCCTTTTATGCTCAATAC TGTATTTATGAGTTCATTTGTACGGATTTGGGAGTCAAGTTCTATCTACGAAATAGCTAAATACCCCGATGCCTCCTACC AATACGGCAAAATATGCACCTATTTCATGACAATATTGGCTTATGCTCTTCTCATTTTAGCAGTTATGTCCGATCTTGTT ATGAAGATTTTTGCTGCACCTTCCTACTTTACTGCGCACGAATATATTCCAATAATTTCGTTGGGCGTCTGGGGTTATGC TTTGCATACTTTTGTACGCGTGGGTGTTAATCTATCAAAAAAAACGCACTTATTTACTATAAATTACATGCTGACGCTGA TATACAACGTTGGATTGAATTGTCTACTTGTTCCAAAATGGGGTGCTTTTGGGGCTGCTTGGGCCACTGTTGGTACTTAT TTCGGTTTTAGTATTGGAGGTTATATAGTCTACCGAAAGTATAATTGTGTAAATATTGAGTGGTCAAGGCTTGTAATGGT AGTTTTAATGGCAGTTTCATTGGTTGCAATAAAGCAAAACACATATATAGCTAATCAATTATATTATATTATTTTAGAGA TATGTTTAATCGTTCTTTTTCCAATACTGTTGATTGCGTTTATCTTTGCTACAAAACAACCAGAAGTTATAGTTATAAAA AACATTTATGCTGCAATGCGGAAATTTATCTAA
Upstream 100 bases:
>100_bases AGGTGTGCGCAAACGCATTTTAGTAACGCGGCTTTTTTCGAGTCCTACAATAAGTTGTATTGTAACGTTCTTTACTCTGA ACGATAGGCTATAAGTAAAT
Downstream 100 bases:
>100_bases AATATTAAATTTTAAATCGTGAAGTATTATAGGCTGGTGTGTTGAATGAAAATTCCAATAGTTATGAAAACGTGGGCTGG TTCTGAATCCTATGATTTTT
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Exopolysaccharide Biosynthesis Protein; Exopolysacharide Protein Wzx; Lipopolysaccharide Biosynthesis Protein; Polysaccharide Transporter; Polysaccharide Transporter Protein; O-Antigen Translocase; O-Antigen And Teichoic Acid Export Protein; Multi Anti Extrusion Protein MatE; Cytosol Aminopeptidase; Polysaccharide Biosynthesis Domain-Containing Protein; Flippase Wzx
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MSLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRILCALGFSSAIVRFYNDSTDVC FRRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGVNVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTV QVVFQSSLNLYLVVFRDLGVTGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDR FFIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICTYFMTILAYALLILAVMSDLV MKIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSKKTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTY FGFSIGGYIVYRKYNCVNIEWSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIK NIYAAMRKFI
Sequences:
>Translated_490_residues MSLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRILCALGFSSAIVRFYNDSTDVC FRRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGVNVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTV QVVFQSSLNLYLVVFRDLGVTGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDR FFIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICTYFMTILAYALLILAVMSDLV MKIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSKKTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTY FGFSIGGYIVYRKYNCVNIEWSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIK NIYAAMRKFI >Mature_489_residues SLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRILCALGFSSAIVRFYNDSTDVCF RRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGVNVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTVQ VVFQSSLNLYLVVFRDLGVTGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDRF FIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICTYFMTILAYALLILAVMSDLVM KIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSKKTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTYF GFSIGGYIVYRKYNCVNIEWSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIKN IYAAMRKFI
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55101; Mature: 54969
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRIL CCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH CALGFSSAIVRFYNDSTDVCFRRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGV HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC NVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTVQVVFQSSLNLYLVVFRDLGV HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEHHCCH TGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDR HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FFIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICT HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCHHHHHH YFMTILAYALLILAVMSDLVMKIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCC KTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTYFGFSIGGYIVYRKYNCVNIE CEEEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCC WSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH NIYAAMRKFI HHHHHHHHCC >Mature Secondary Structure SLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRIL CCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH CALGFSSAIVRFYNDSTDVCFRRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGV HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC NVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTVQVVFQSSLNLYLVVFRDLGV HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEHHCCH TGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDR HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FFIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICT HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCHHHHHH YFMTILAYALLILAVMSDLVMKIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCC KTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTYFGFSIGGYIVYRKYNCVNIE CEEEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCC WSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH NIYAAMRKFI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA