Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is 118580872

Identifier: 118580872

GI number: 118580872

Start: 2658986

End: 2660458

Strand: Reverse

Name: 118580872

Synonym: Ppro_2459

Alternate gene names: NA

Gene position: 2660458-2658986 (Counterclockwise)

Preceding gene: 118580873

Following gene: 118580871

Centisome position: 66.38

GC content: 36.18

Gene sequence:

>1473_bases
ATGTCATTAAAAAATTCACTCTGCGACATCAGCAAACATAGCTTGATATATATGCTTGGATGGGGGATTGCCGCTGCAAT
ACGATTAGGGATGCTGCCCCTCTTCACCCGTTGCTTAGGACAACAGGATTACGGAATCATCTCTATTTTGGATAGTTCTG
TTGAATTGTTACGTATACTCTGTGCGTTGGGATTCAGTTCTGCTATTGTGAGATTTTATAACGACAGTACGGATGTTTGC
TTCAGGCGCACGGTTATGGCTACAGGCGCTTGTTTTTCCTTGCTTGCTACTGTTTTTTTTGGTCTTGGCATTTTTCCTTT
TAGTAAACAAATCTCAGAATTCATTTTAGGAAATGGGGTAAATGTACTCTACTTTAAACTTGCATTTGCTACCATATTGC
TCAATATAATTAGAAGTGTTGCTGATTCATATTTAACAGTTAATAAATACTCAGTGCAATACATTGTAATTAATACTGTT
CAAGTTGTGTTCCAGTCGTCACTGAATTTATATTTAGTTGTGTTCAGAGATCTTGGTGTTACTGGAATGTTGGTAGGAAA
TTTATTGGTTGCCTTTATTTTTGATGTAGGCTTGTATGCATTCGTAGCTTTTAAGAATGGCCTTGTCATTGATTTTAAGG
TGATAATTCCAATGCTCAAATTTTCACTTCCTCTTGTTCCGACTGTGTTGGCTGCGGCAGCCATGCATAACTTAGATAGA
TTTTTTATCAAGTTTTTCGCCTCAATGGAGGATGTTGGTCTTTATTCGCTGGCATATCAGTTTCCTTTTATGCTCAATAC
TGTATTTATGAGTTCATTTGTACGGATTTGGGAGTCAAGTTCTATCTACGAAATAGCTAAATACCCCGATGCCTCCTACC
AATACGGCAAAATATGCACCTATTTCATGACAATATTGGCTTATGCTCTTCTCATTTTAGCAGTTATGTCCGATCTTGTT
ATGAAGATTTTTGCTGCACCTTCCTACTTTACTGCGCACGAATATATTCCAATAATTTCGTTGGGCGTCTGGGGTTATGC
TTTGCATACTTTTGTACGCGTGGGTGTTAATCTATCAAAAAAAACGCACTTATTTACTATAAATTACATGCTGACGCTGA
TATACAACGTTGGATTGAATTGTCTACTTGTTCCAAAATGGGGTGCTTTTGGGGCTGCTTGGGCCACTGTTGGTACTTAT
TTCGGTTTTAGTATTGGAGGTTATATAGTCTACCGAAAGTATAATTGTGTAAATATTGAGTGGTCAAGGCTTGTAATGGT
AGTTTTAATGGCAGTTTCATTGGTTGCAATAAAGCAAAACACATATATAGCTAATCAATTATATTATATTATTTTAGAGA
TATGTTTAATCGTTCTTTTTCCAATACTGTTGATTGCGTTTATCTTTGCTACAAAACAACCAGAAGTTATAGTTATAAAA
AACATTTATGCTGCAATGCGGAAATTTATCTAA

Upstream 100 bases:

>100_bases
AGGTGTGCGCAAACGCATTTTAGTAACGCGGCTTTTTTCGAGTCCTACAATAAGTTGTATTGTAACGTTCTTTACTCTGA
ACGATAGGCTATAAGTAAAT

Downstream 100 bases:

>100_bases
AATATTAAATTTTAAATCGTGAAGTATTATAGGCTGGTGTGTTGAATGAAAATTCCAATAGTTATGAAAACGTGGGCTGG
TTCTGAATCCTATGATTTTT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Exopolysaccharide Biosynthesis Protein; Exopolysacharide Protein Wzx; Lipopolysaccharide Biosynthesis Protein; Polysaccharide Transporter; Polysaccharide Transporter Protein; O-Antigen Translocase; O-Antigen And Teichoic Acid Export Protein; Multi Anti Extrusion Protein MatE; Cytosol Aminopeptidase; Polysaccharide Biosynthesis Domain-Containing Protein; Flippase Wzx

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MSLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRILCALGFSSAIVRFYNDSTDVC
FRRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGVNVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTV
QVVFQSSLNLYLVVFRDLGVTGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDR
FFIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICTYFMTILAYALLILAVMSDLV
MKIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSKKTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTY
FGFSIGGYIVYRKYNCVNIEWSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIK
NIYAAMRKFI

Sequences:

>Translated_490_residues
MSLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRILCALGFSSAIVRFYNDSTDVC
FRRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGVNVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTV
QVVFQSSLNLYLVVFRDLGVTGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDR
FFIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICTYFMTILAYALLILAVMSDLV
MKIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSKKTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTY
FGFSIGGYIVYRKYNCVNIEWSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIK
NIYAAMRKFI
>Mature_489_residues
SLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRILCALGFSSAIVRFYNDSTDVCF
RRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGVNVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTVQ
VVFQSSLNLYLVVFRDLGVTGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDRF
FIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICTYFMTILAYALLILAVMSDLVM
KIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSKKTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTYF
GFSIGGYIVYRKYNCVNIEWSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIKN
IYAAMRKFI

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55101; Mature: 54969

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRIL
CCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
CALGFSSAIVRFYNDSTDVCFRRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGV
HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
NVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTVQVVFQSSLNLYLVVFRDLGV
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEHHCCH
TGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FFIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICT
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCHHHHHH
YFMTILAYALLILAVMSDLVMKIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
KTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTYFGFSIGGYIVYRKYNCVNIE
CEEEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
WSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH
NIYAAMRKFI
HHHHHHHHCC
>Mature Secondary Structure 
SLKNSLCDISKHSLIYMLGWGIAAAIRLGMLPLFTRCLGQQDYGIISILDSSVELLRIL
CCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
CALGFSSAIVRFYNDSTDVCFRRTVMATGACFSLLATVFFGLGIFPFSKQISEFILGNGV
HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
NVLYFKLAFATILLNIIRSVADSYLTVNKYSVQYIVINTVQVVFQSSLNLYLVVFRDLGV
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEHHCCH
TGMLVGNLLVAFIFDVGLYAFVAFKNGLVIDFKVIIPMLKFSLPLVPTVLAAAAMHNLDR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FFIKFFASMEDVGLYSLAYQFPFMLNTVFMSSFVRIWESSSIYEIAKYPDASYQYGKICT
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCHHHHHH
YFMTILAYALLILAVMSDLVMKIFAAPSYFTAHEYIPIISLGVWGYALHTFVRVGVNLSK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
KTHLFTINYMLTLIYNVGLNCLLVPKWGAFGAAWATVGTYFGFSIGGYIVYRKYNCVNIE
CEEEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
WSRLVMVVLMAVSLVAIKQNTYIANQLYYIILEICLIVLFPILLIAFIFATKQPEVIVIK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH
NIYAAMRKFI
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA