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The map label for this gene is nudC [H]

Identifier: 118580840

GI number: 118580840

Start: 2627293

End: 2628198

Strand: Direct

Name: nudC [H]

Synonym: Ppro_2427

Alternate gene names: 118580840

Gene position: 2627293-2628198 (Clockwise)

Preceding gene: 118580821

Following gene: 118580842

Centisome position: 65.55

GC content: 65.78

Gene sequence:

>906_bases
ATGACTCTTTCTTCAACAGGCACAGGCAGGACCGACACATCCGAACTTCCCTACAACGGCAAGGCCGTCAAAGACCGGTT
CTCTCCCCTCTCACCGGACAGCGTGCCCCAGAACAGCCCCGGCTTCTGGGTCATCCTGCAGCGGCAGACCCTGCTGGTCA
CCACCGCTTCGGCAACGGTCCAGCTTCCCCACGGCCCGCTGCCGGAGGGGCTCCAACCCCTGGCCGCCCCGGTGGGAATC
GGACTCTGGCAGGGCCAGCCGCTGCGCGCCGCACGGATCGCCGAGGATGCCCCCCTGCCCGCGGGGTGCGAGGCGTTCCC
CTTTTTCGGACCGGACCAGCGCCTGGACGTGGGACTGGCAACCCTGGCGGGGCGCGCCAACCAGATCATGCACTGGGAAC
GGCGCAGCCGATTCTGCTCCGTCTGCGGGGGAGAGACGACACGCATCCCCACCACCTGGGGCAAGCGCTGCGGAGTATGC
AGGGAGATGCACTTCCCCCACATCCACCCCTGCGTCATCGTACTGGTCAAACGAGGTGACGAATTCATGCTGATCCGCAA
GGCCGGAGCAGTGCCGGGGCGTTTCAGCCCCATCGCCGGCTTCGTGGATTTCGGCGAGTCTCTCGAGGAGTGCGTCCAGA
GGGAGGTGCATGAAGAGGTCGGCCTGAACATCGCCAACATCCGCTACCTGGGCAGCCAGAACTGGCCCTTCCCCAGCCAG
CAGATGATCGGCTTTTTGGCCGACTACGTGGACGGCGAACCGAAACCGGATGGCGTTGAGGTCATCGAGGCGCACTGGCT
GACCGGCGACGCCATCCCGGATACATCGGGCGGCAGCAGGAGCATCGCCCGCTGGATGCTGGAAAACTTCGCCATCAACG
GGCAACAGCCGGCGCCGTGCCGGTAA

Upstream 100 bases:

>100_bases
AAAAGTTCAATTATCCTTGGCTGGACGCAGCAACCAAACACGACCTACGGCACTGGAAGCGCCGGTTCCAGGATTCCACA
CCACTCCATGGGAGGCCACC

Downstream 100 bases:

>100_bases
GTCGGGACCGATCCGGACAGGCGGAAACCATCGGCGGTGGGCATGGCGCCTACCGCCGAAGCAGTTTCAAGGCGGAGAGC
ACCAGAAACATGATGCCGTT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTLSSTGTGRTDTSELPYNGKAVKDRFSPLSPDSVPQNSPGFWVILQRQTLLVTTASATVQLPHGPLPEGLQPLAAPVGI
GLWQGQPLRAARIAEDAPLPAGCEAFPFFGPDQRLDVGLATLAGRANQIMHWERRSRFCSVCGGETTRIPTTWGKRCGVC
REMHFPHIHPCVIVLVKRGDEFMLIRKAGAVPGRFSPIAGFVDFGESLEECVQREVHEEVGLNIANIRYLGSQNWPFPSQ
QMIGFLADYVDGEPKPDGVEVIEAHWLTGDAIPDTSGGSRSIARWMLENFAINGQQPAPCR

Sequences:

>Translated_301_residues
MTLSSTGTGRTDTSELPYNGKAVKDRFSPLSPDSVPQNSPGFWVILQRQTLLVTTASATVQLPHGPLPEGLQPLAAPVGI
GLWQGQPLRAARIAEDAPLPAGCEAFPFFGPDQRLDVGLATLAGRANQIMHWERRSRFCSVCGGETTRIPTTWGKRCGVC
REMHFPHIHPCVIVLVKRGDEFMLIRKAGAVPGRFSPIAGFVDFGESLEECVQREVHEEVGLNIANIRYLGSQNWPFPSQ
QMIGFLADYVDGEPKPDGVEVIEAHWLTGDAIPDTSGGSRSIARWMLENFAINGQQPAPCR
>Mature_300_residues
TLSSTGTGRTDTSELPYNGKAVKDRFSPLSPDSVPQNSPGFWVILQRQTLLVTTASATVQLPHGPLPEGLQPLAAPVGIG
LWQGQPLRAARIAEDAPLPAGCEAFPFFGPDQRLDVGLATLAGRANQIMHWERRSRFCSVCGGETTRIPTTWGKRCGVCR
EMHFPHIHPCVIVLVKRGDEFMLIRKAGAVPGRFSPIAGFVDFGESLEECVQREVHEEVGLNIANIRYLGSQNWPFPSQQ
MIGFLADYVDGEPKPDGVEVIEAHWLTGDAIPDTSGGSRSIARWMLENFAINGQQPAPCR

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=192, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI50593112, Length=193, Percent_Identity=31.6062176165803, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI48994995, Length=238, Percent_Identity=36.1344537815126, Blast_Score=150, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI71986510, Length=177, Percent_Identity=29.9435028248588, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI212645999, Length=177, Percent_Identity=29.9435028248588, Blast_Score=81, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022925
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 32852; Mature: 32721

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSSTGTGRTDTSELPYNGKAVKDRFSPLSPDSVPQNSPGFWVILQRQTLLVTTASATV
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEECCEEE
QLPHGPLPEGLQPLAAPVGIGLWQGQPLRAARIAEDAPLPAGCEAFPFFGPDQRLDVGLA
ECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
TLAGRANQIMHWERRSRFCSVCGGETTRIPTTWGKRCGVCREMHFPHIHPCVIVLVKRGD
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHCCCCCCCCEEEEEEECCC
EFMLIRKAGAVPGRFSPIAGFVDFGESLEECVQREVHEEVGLNIANIRYLGSQNWPFPSQ
EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHH
QMIGFLADYVDGEPKPDGVEVIEAHWLTGDAIPDTSGGSRSIARWMLENFAINGQQPAPC
HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
R
C
>Mature Secondary Structure 
TLSSTGTGRTDTSELPYNGKAVKDRFSPLSPDSVPQNSPGFWVILQRQTLLVTTASATV
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEECCEEE
QLPHGPLPEGLQPLAAPVGIGLWQGQPLRAARIAEDAPLPAGCEAFPFFGPDQRLDVGLA
ECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
TLAGRANQIMHWERRSRFCSVCGGETTRIPTTWGKRCGVCREMHFPHIHPCVIVLVKRGD
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHCCCCCCCCEEEEEEECCC
EFMLIRKAGAVPGRFSPIAGFVDFGESLEECVQREVHEEVGLNIANIRYLGSQNWPFPSQ
EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHH
QMIGFLADYVDGEPKPDGVEVIEAHWLTGDAIPDTSGGSRSIARWMLENFAINGQQPAPC
HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA