| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118580804
Identifier: 118580804
GI number: 118580804
Start: 2589347
End: 2589991
Strand: Direct
Name: 118580804
Synonym: Ppro_2390
Alternate gene names: NA
Gene position: 2589347-2589991 (Clockwise)
Preceding gene: 118580803
Following gene: 118580805
Centisome position: 64.6
GC content: 60.0
Gene sequence:
>645_bases GTGCAACAGCTCGCCATGATACAACCCGCTCCTGACCCTTACGCCGCATGGCTGGCGGCAAACGCTGTCGCCTACTGCCA GCGGATGAGGGCCACCATCACACATACCGCTTGTGCTGAAAACAAGCAACGCTCCGACCAGGCATGCGGGGATAATCGTT GTCGCTTCTGCGACGGTCTGGACGACCAGGCCGGGCCGGTCCCGGAGCACCAGCCAGAAATAATCCCGGATACATGTTTT CCCGAGGTTGTTGACGGGCCGCCCGTCGCGGACCTTGCTGACGATGCGCTCGTCAAGGGGATTGACGTCGAACCGCCCGC GCGGATCGGCGCGACGGTGATGGATGACGTGGAAATGGAAGAACTGCTTTCCGAGCTGTTCGGCGATGAAGGCAGCGAGG ATGAGGATGAAGAACGGGGGGAACAGCGGCGCGTGGTCTACCTCGACGATCCGCCAGAAAGACGGCAATCCGTTCCGGTC TATATCGGGCGCTGTCGCCGCTGTGGGGGGTACATGCTCAACGCCCTGGAACGGCACGACGGTATTATTGATGACGATGT GTATCGCTGTTTCTCGTGTGGCTGGAGAACGTCGAAGACATACGAAACCAACCGGATATTGGCGGCAAAGGGGGTGATGC CTTGA
Upstream 100 bases:
>100_bases GCATTTAGTAAACTCGTTTATCAGCTTTTTAACGGTGAAATTGGTAGGACTGGGGCAGGAAGTAAAACACTTTGTTTCTT GCCGCCACCAGGGGCCGCCC
Downstream 100 bases:
>100_bases CTCATGGAAAAAATGGCAAATTGGTTGAATTTCTCATCCTCGAAGCGGTCGCCCTGCTTGAGCGTCACGGAGAGGATGCA AAAACGGCACGTCGTGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MQQLAMIQPAPDPYAAWLAANAVAYCQRMRATITHTACAENKQRSDQACGDNRCRFCDGLDDQAGPVPEHQPEIIPDTCF PEVVDGPPVADLADDALVKGIDVEPPARIGATVMDDVEMEELLSELFGDEGSEDEDEERGEQRRVVYLDDPPERRQSVPV YIGRCRRCGGYMLNALERHDGIIDDDVYRCFSCGWRTSKTYETNRILAAKGVMP
Sequences:
>Translated_214_residues MQQLAMIQPAPDPYAAWLAANAVAYCQRMRATITHTACAENKQRSDQACGDNRCRFCDGLDDQAGPVPEHQPEIIPDTCF PEVVDGPPVADLADDALVKGIDVEPPARIGATVMDDVEMEELLSELFGDEGSEDEDEERGEQRRVVYLDDPPERRQSVPV YIGRCRRCGGYMLNALERHDGIIDDDVYRCFSCGWRTSKTYETNRILAAKGVMP >Mature_214_residues MQQLAMIQPAPDPYAAWLAANAVAYCQRMRATITHTACAENKQRSDQACGDNRCRFCDGLDDQAGPVPEHQPEIIPDTCF PEVVDGPPVADLADDALVKGIDVEPPARIGATVMDDVEMEELLSELFGDEGSEDEDEERGEQRRVVYLDDPPERRQSVPV YIGRCRRCGGYMLNALERHDGIIDDDVYRCFSCGWRTSKTYETNRILAAKGVMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23840; Mature: 23840
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLAMIQPAPDPYAAWLAANAVAYCQRMRATITHTACAENKQRSDQACGDNRCRFCDGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DDQAGPVPEHQPEIIPDTCFPEVVDGPPVADLADDALVKGIDVEPPARIGATVMDDVEME CCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHH ELLSELFGDEGSEDEDEERGEQRRVVYLDDPPERRQSVPVYIGRCRRCGGYMLNALERHD HHHHHHHCCCCCCCCHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GIIDDDVYRCFSCGWRTSKTYETNRILAAKGVMP CCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MQQLAMIQPAPDPYAAWLAANAVAYCQRMRATITHTACAENKQRSDQACGDNRCRFCDGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DDQAGPVPEHQPEIIPDTCFPEVVDGPPVADLADDALVKGIDVEPPARIGATVMDDVEME CCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHH ELLSELFGDEGSEDEDEERGEQRRVVYLDDPPERRQSVPVYIGRCRRCGGYMLNALERHD HHHHHHHCCCCCCCCHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GIIDDDVYRCFSCGWRTSKTYETNRILAAKGVMP CCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA