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The map label for this gene is ygcI [C]

Identifier: 118580754

GI number: 118580754

Start: 2528059

End: 2528757

Strand: Reverse

Name: ygcI [C]

Synonym: Ppro_2339

Alternate gene names: 118580754

Gene position: 2528757-2528059 (Counterclockwise)

Preceding gene: 118580755

Following gene: 118580753

Centisome position: 63.09

GC content: 55.22

Gene sequence:

>699_bases
ATGCCCACATTATTACTTCGTCTGGTGGGCCCCATGCAGTCGTGGGGTACCACCAGCCGTTTTGACCAACGTGATACCGG
GAAGGAACCGAGCAAATCCGGGGTTGTCGGACTTCTGGCCGCTGCCTTGGGAATTGACCGCGAGAACTGGGTGGATCTGG
AACCGCTCACCTGTCTGGCCATGGGGGTTCGCCATGACAGGCCGGGCGTGCCCAAGCGCGACTATCAAACAGCGGGATGC
GCCTCAACAGATACCATCATCAAGGCAGATGGAACGCAGGCCAAGGGCGGCGGTGTTGTTTCTCAGCGTTTCTACCTTGC
CGACGCGGCTTTTCTGGTGGGTTTGGAATGCGATGATAATTGCTTGCTGGAACGGATTCATGTCGCTCTGCATAATCCTT
TCTGGACTTTGGCCTTGGGGCGTAAATCATATGTGCCATCCGAGTCTATCTGGATAGTGGATGGAGTACGGGATGCTCCG
CTTCTCGAAACGTTAAAACGCTATCCATGGATAGCTTCGAGCCGAAGTCGGGAAGAACCGCCAGAAAGGCTTTTGGTCTC
CATTGAGTCTGATGATGGTGCGGGTGTACTCAAGATGGATCAGCCCTTGTCTTCATTCGCCGAACGGCGCTTCGGTGCTC
GGTTCGTGCGTTCGGAATGGATTCCTTTTCCTCAGGAGGTGGCCAGTGTTCCTGAGTAG

Upstream 100 bases:

>100_bases
TCTTAATCTCGCTGAGGCCACTATCGATGGATTCGGTATCGTGATGCCAACGCTCAATGATCTTCTCGACAAGGCCCTGT
TGGCTGTGCAGGAGTGACCT

Downstream 100 bases:

>100_bases
ACTGCGCTTGAATTTGCGATGCCGGGAGGCTCGGCGGGATCTTTCCAACCCGTATCAGCTACATTCAACGCTCTGTCGTG
CATTCAGTCCGCCAGAGACG

Product: CRISPR-associated Cas5 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Protein; CRISPR-Associated Cas5e Family Protein; Cas5 Family CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Protein Cas5e Family; Crispr-Associated Family Protein; CRISPR-Associated Protein Cas5e-Type; CRISPR-Associated Cas5 Family Ecoli Subtype Protein; CRISPR-Associated Family Protein; CRISPR-Associated Cse5e Family Protein; CRISPR-Associated Protein CT; CRISPR-Associated Subtype; CRISPR-Associated Ecoli Subtype

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MPTLLLRLVGPMQSWGTTSRFDQRDTGKEPSKSGVVGLLAAALGIDRENWVDLEPLTCLAMGVRHDRPGVPKRDYQTAGC
ASTDTIIKADGTQAKGGGVVSQRFYLADAAFLVGLECDDNCLLERIHVALHNPFWTLALGRKSYVPSESIWIVDGVRDAP
LLETLKRYPWIASSRSREEPPERLLVSIESDDGAGVLKMDQPLSSFAERRFGARFVRSEWIPFPQEVASVPE

Sequences:

>Translated_232_residues
MPTLLLRLVGPMQSWGTTSRFDQRDTGKEPSKSGVVGLLAAALGIDRENWVDLEPLTCLAMGVRHDRPGVPKRDYQTAGC
ASTDTIIKADGTQAKGGGVVSQRFYLADAAFLVGLECDDNCLLERIHVALHNPFWTLALGRKSYVPSESIWIVDGVRDAP
LLETLKRYPWIASSRSREEPPERLLVSIESDDGAGVLKMDQPLSSFAERRFGARFVRSEWIPFPQEVASVPE
>Mature_231_residues
PTLLLRLVGPMQSWGTTSRFDQRDTGKEPSKSGVVGLLAAALGIDRENWVDLEPLTCLAMGVRHDRPGVPKRDYQTAGCA
STDTIIKADGTQAKGGGVVSQRFYLADAAFLVGLECDDNCLLERIHVALHNPFWTLALGRKSYVPSESIWIVDGVRDAPL
LETLKRYPWIASSRSREEPPERLLVSIESDDGAGVLKMDQPLSSFAERRFGARFVRSEWIPFPQEVASVPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25624; Mature: 25493

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLLLRLVGPMQSWGTTSRFDQRDTGKEPSKSGVVGLLAAALGIDRENWVDLEPLTCLA
CCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
MGVRHDRPGVPKRDYQTAGCASTDTIIKADGTQAKGGGVVSQRFYLADAAFLVGLECDDN
HHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHEECEEEEEEECCCCH
CLLERIHVALHNPFWTLALGRKSYVPSESIWIVDGVRDAPLLETLKRYPWIASSRSREEP
HHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
PERLLVSIESDDGAGVLKMDQPLSSFAERRFGARFVRSEWIPFPQEVASVPE
CCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure 
PTLLLRLVGPMQSWGTTSRFDQRDTGKEPSKSGVVGLLAAALGIDRENWVDLEPLTCLA
CHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
MGVRHDRPGVPKRDYQTAGCASTDTIIKADGTQAKGGGVVSQRFYLADAAFLVGLECDDN
HHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHEECEEEEEEECCCCH
CLLERIHVALHNPFWTLALGRKSYVPSESIWIVDGVRDAPLLETLKRYPWIASSRSREEP
HHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
PERLLVSIESDDGAGVLKMDQPLSSFAERRFGARFVRSEWIPFPQEVASVPE
CCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA