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The map label for this gene is ygaU [C]

Identifier: 118580743

GI number: 118580743

Start: 2513642

End: 2514346

Strand: Reverse

Name: ygaU [C]

Synonym: Ppro_2328

Alternate gene names: 118580743

Gene position: 2514346-2513642 (Counterclockwise)

Preceding gene: 118580744

Following gene: 118580742

Centisome position: 62.73

GC content: 68.23

Gene sequence:

>705_bases
ATGAGCCGCCGGCCCCTCGCCATAGCGCTCCTGGTCGGCTCCCTGCTGGTCTCCTGCGCTGCACCGGCGCCCACCTGGCG
CACCCAGGCGGCCTCCATGGTCAACGAACTGGATCAGCAGAAAGCCCAGCGTCTCATGCCCCAGGAGTACCAGAGCCTGC
TGGAAACCTTCGAACATGGCGAGGCGGTGTTCTATGTCCGCAGGAAGGACAACGAGGCCGACGCTTATTACCTGCTGGTT
CTCCAGAAGGGTGCGGTCCTGCGGGAAAACCTGCGCCTGCTGAAGGAACGCCTGCTGGCCGAGGAGCGTAAACGGGCCGC
CGAAGAGGCGGCCCGCCTTGAAGAGGAGCGTCTGGCGCGGGAGGCTGCCGAGGCGGTTGAGCGGCAGCGCCGGCAGGAGC
AACTCAAGGCGGCGGCGGAGGCGCGGGCGGCCCAGGCCGCCAGGACGCACACCCAGGTGCGGGAGCGGGAACTGTCGCCC
CCCCAGCCGTCGGCCTACACGGTGCGTCGCGGCGAAACCCTTCCCCAGATCGCAGCCCGTCCCGAAATCTACGCCGATGC
GTCGCTCTGGCCCCTGCTCTACCGTGCCAACCGTGACCAGATCCGCGACCCCAAACGTCTCTGGCCCGGCCAGGTACTCA
GGATCCCCCGCCGCTTCTCCCGTGACGAGGCCCTGGAGGCCAAGCGCTTTTCCTCTAGGCACTGA

Upstream 100 bases:

>100_bases
GAGCCTGCCTGATGTCCGAGGCGCCTTCGCGGGTGGAGACCAAGCAGTTGCGCGAACTGGGGATCAGGCTGGCGGAAAAG
CAGGTCTAGGCCGCAATTCC

Downstream 100 bases:

>100_bases
TACGGTTCCCTCACCCTTTACCCCTTACCCCCCCCCGCCATTGGTCCGTCTCGTCCCTATTGACTGCCCTCTCATCTCTG
CCGTTTCTCTCTGCTATCCC

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain Lipoprotein

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSRRPLAIALLVGSLLVSCAAPAPTWRTQAASMVNELDQQKAQRLMPQEYQSLLETFEHGEAVFYVRRKDNEADAYYLLV
LQKGAVLRENLRLLKERLLAEERKRAAEEAARLEEERLAREAAEAVERQRRQEQLKAAAEARAAQAARTHTQVRERELSP
PQPSAYTVRRGETLPQIAARPEIYADASLWPLLYRANRDQIRDPKRLWPGQVLRIPRRFSRDEALEAKRFSSRH

Sequences:

>Translated_234_residues
MSRRPLAIALLVGSLLVSCAAPAPTWRTQAASMVNELDQQKAQRLMPQEYQSLLETFEHGEAVFYVRRKDNEADAYYLLV
LQKGAVLRENLRLLKERLLAEERKRAAEEAARLEEERLAREAAEAVERQRRQEQLKAAAEARAAQAARTHTQVRERELSP
PQPSAYTVRRGETLPQIAARPEIYADASLWPLLYRANRDQIRDPKRLWPGQVLRIPRRFSRDEALEAKRFSSRH
>Mature_233_residues
SRRPLAIALLVGSLLVSCAAPAPTWRTQAASMVNELDQQKAQRLMPQEYQSLLETFEHGEAVFYVRRKDNEADAYYLLVL
QKGAVLRENLRLLKERLLAEERKRAAEEAARLEEERLAREAAEAVERQRRQEQLKAAAEARAAQAARTHTQVRERELSPP
QPSAYTVRRGETLPQIAARPEIYADASLWPLLYRANRDQIRDPKRLWPGQVLRIPRRFSRDEALEAKRFSSRH

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27002; Mature: 26871

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRPLAIALLVGSLLVSCAAPAPTWRTQAASMVNELDQQKAQRLMPQEYQSLLETFEHG
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
EAVFYVRRKDNEADAYYLLVLQKGAVLRENLRLLKERLLAEERKRAAEEAARLEEERLAR
CEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAEAVERQRRQEQLKAAAEARAAQAARTHTQVRERELSPPQPSAYTVRRGETLPQIAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCC
PEIYADASLWPLLYRANRDQIRDPKRLWPGQVLRIPRRFSRDEALEAKRFSSRH
CCHHCCCHHHHHHHHCCHHHCCCCHHCCCHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRRPLAIALLVGSLLVSCAAPAPTWRTQAASMVNELDQQKAQRLMPQEYQSLLETFEHG
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
EAVFYVRRKDNEADAYYLLVLQKGAVLRENLRLLKERLLAEERKRAAEEAARLEEERLAR
CEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAEAVERQRRQEQLKAAAEARAAQAARTHTQVRERELSPPQPSAYTVRRGETLPQIAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCC
PEIYADASLWPLLYRANRDQIRDPKRLWPGQVLRIPRRFSRDEALEAKRFSSRH
CCHHCCCHHHHHHHHCCHHHCCCCHHCCCHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA