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The map label for this gene is ycgE [C]

Identifier: 118580716

GI number: 118580716

Start: 2483788

End: 2484156

Strand: Reverse

Name: ycgE [C]

Synonym: Ppro_2301

Alternate gene names: 118580716

Gene position: 2484156-2483788 (Counterclockwise)

Preceding gene: 118580717

Following gene: 118580715

Centisome position: 61.98

GC content: 51.22

Gene sequence:

>369_bases
ATGAATGAAGACTTCTCCGACAAGCTGTATTACAAGATCGGTGAAGTGGCCCAACTAGTGGGAGTCAAGGCCTCGGTGCT
CCGTTTCTGGGAGAGCGAGTTCGAGTTTCTCAGGCCTGAAAAGAGCAGTACCGGCCAGAGGCTCTATACGAAGAAGGAAG
TCACCCTCTTGCAGGAGGTGAAACGCCTCCTCTACACGGAAAAATTCACCATCGAGGGTGTCCGGAAAAGAATTAATCGC
CATGGGAAGATCCGTGGCGAAGCGGTATCCCACCAGGATTCAGAAACCGGTTATTACGGGCTTCTGAAGGATATCAAAGC
AGAACTGCTGGTGCTTAAGTGCCAGTTGCAAAAGGGTTTCGGTGCGTAG

Upstream 100 bases:

>100_bases
TAACCATCGCAGCACGCCGCATTTTGACGTTCAAGCCAAGCCAAGTGCTGAAGAATGCCATCAACGTAGAAAACGCCGAG
AGTGCCTAGCGGACGGCGGC

Downstream 100 bases:

>100_bases
CGCAGCCTGGTAGCGCACTAGACTGGGGGTCTAGTGGTCGCTGGTTCGAATCCAGTCGCACCGACCAATAAATAGTCCGG
TATCATCCGGACAAGTACAG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNEDFSDKLYYKIGEVAQLVGVKASVLRFWESEFEFLRPEKSSTGQRLYTKKEVTLLQEVKRLLYTEKFTIEGVRKRINR
HGKIRGEAVSHQDSETGYYGLLKDIKAELLVLKCQLQKGFGA

Sequences:

>Translated_122_residues
MNEDFSDKLYYKIGEVAQLVGVKASVLRFWESEFEFLRPEKSSTGQRLYTKKEVTLLQEVKRLLYTEKFTIEGVRKRINR
HGKIRGEAVSHQDSETGYYGLLKDIKAELLVLKCQLQKGFGA
>Mature_122_residues
MNEDFSDKLYYKIGEVAQLVGVKASVLRFWESEFEFLRPEKSSTGQRLYTKKEVTLLQEVKRLLYTEKFTIEGVRKRINR
HGKIRGEAVSHQDSETGYYGLLKDIKAELLVLKCQLQKGFGA

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14150; Mature: 14150

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDFSDKLYYKIGEVAQLVGVKASVLRFWESEFEFLRPEKSSTGQRLYTKKEVTLLQEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
KRLLYTEKFTIEGVRKRINRHGKIRGEAVSHQDSETGYYGLLKDIKAELLVLKCQLQKGF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
GA
CC
>Mature Secondary Structure
MNEDFSDKLYYKIGEVAQLVGVKASVLRFWESEFEFLRPEKSSTGQRLYTKKEVTLLQEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
KRLLYTEKFTIEGVRKRINRHGKIRGEAVSHQDSETGYYGLLKDIKAELLVLKCQLQKGF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA