| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580700
Identifier: 118580700
GI number: 118580700
Start: 2464661
End: 2465413
Strand: Reverse
Name: 118580700
Synonym: Ppro_2285
Alternate gene names: NA
Gene position: 2465413-2464661 (Counterclockwise)
Preceding gene: 118580701
Following gene: 118580699
Centisome position: 61.51
GC content: 49.27
Gene sequence:
>753_bases ATGAAATACCAAAATCGACTAACCGATAACGACAAGCTTCATGAAAAAATTCGGTCACACCGTCCGCTTGACGCTTACGA AGTCAAACAGCTGAAAGAGTATTACCGTATTGGCCTGACGTGGTCAAGCAATGCACTTGAAGGTAACAGCCTCACGGAGA GCGAAACCAAAGTGGTTCTGGAGGATGGTATCACCATCGGCGGAAAGCCCCTGAAGGATCACTTTGAGGCTGTCGGACAT AGCGAAGCGTTTGACCTTCTCTACAAACTGGCTGGCAGCCAGGAAATCACAGAGGACGACATTCTTGGACTGCATCGGCT GTTCTATTACAGGATTCAAGCTGAAACAGCCGGAAAATACCGGGATCGTAACGTCATCATCACTGGAACCGATTTCACCC CGCCGCCACCATCTGATATACCACTCACCATGCAGGATTTTATAAACAGTATACCGTCACTATCTCTGATGCATCCGGTT GAGTATGCCGCCATGCTGCACCTTAATCTTGTAACCATCCATCCCTTTATTGACGGCAACGGCAGAACCGCACGACTGCT GATGAACCTTGCCCTGTTACAGGCTGGATACCCCATCACCATTATTCCCCCCATAATCCGGGGCGACTATATCTCTGTCC TCCGTGATTCCAACAAAGGCGACAATCAGCCGTTTGTAAATTTCATCTCCTGCTGCGTGTGGGAAAGCCAGAAGGAATAT CTGCGCCTGCTGGAGAGCCTTGACAGGAAATAG
Upstream 100 bases:
>100_bases TGCCAAGCTCGTTGGAGCTGGAAGCCGCCTTGTTGATTCAATTTTCCGAAGTAGCCAATAACATTGGCTCTCCTCATATA AATATTTCAATAGGTGCGCT
Downstream 100 bases:
>100_bases ACCTCGATATAGCGAGAAACCATGCCCAAACATCAACTGACTGATACGCTGCAAAAGATATTCAAGGAAGAGAAACAACG CATCGTCTTCTGGTACGATA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Fic Protein; Filamentation Induced By CAMP Protein Fic-Like Protein; Fic Protein Family; Filamentation Induced By Camp Family Protein; FIC Domain-Containing Protein; Fic Family Protein xin-Antitoxin System; Helix-Turn-Helix Domain-Containing Protein; Filamentation Induced By CAMP Family Protein; Fic-Domain-Containing Protein; Fic Protein Involved In; Filamentation Induced By Camp Protein Fic; Fic Family xin-Antitoxin System Toxin Component; AsnC Family Regulatory Protein; Fic/DOC Family Protein
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKYQNRLTDNDKLHEKIRSHRPLDAYEVKQLKEYYRIGLTWSSNALEGNSLTESETKVVLEDGITIGGKPLKDHFEAVGH SEAFDLLYKLAGSQEITEDDILGLHRLFYYRIQAETAGKYRDRNVIITGTDFTPPPPSDIPLTMQDFINSIPSLSLMHPV EYAAMLHLNLVTIHPFIDGNGRTARLLMNLALLQAGYPITIIPPIIRGDYISVLRDSNKGDNQPFVNFISCCVWESQKEY LRLLESLDRK
Sequences:
>Translated_250_residues MKYQNRLTDNDKLHEKIRSHRPLDAYEVKQLKEYYRIGLTWSSNALEGNSLTESETKVVLEDGITIGGKPLKDHFEAVGH SEAFDLLYKLAGSQEITEDDILGLHRLFYYRIQAETAGKYRDRNVIITGTDFTPPPPSDIPLTMQDFINSIPSLSLMHPV EYAAMLHLNLVTIHPFIDGNGRTARLLMNLALLQAGYPITIIPPIIRGDYISVLRDSNKGDNQPFVNFISCCVWESQKEY LRLLESLDRK >Mature_250_residues MKYQNRLTDNDKLHEKIRSHRPLDAYEVKQLKEYYRIGLTWSSNALEGNSLTESETKVVLEDGITIGGKPLKDHFEAVGH SEAFDLLYKLAGSQEITEDDILGLHRLFYYRIQAETAGKYRDRNVIITGTDFTPPPPSDIPLTMQDFINSIPSLSLMHPV EYAAMLHLNLVTIHPFIDGNGRTARLLMNLALLQAGYPITIIPPIIRGDYISVLRDSNKGDNQPFVNFISCCVWESQKEY LRLLESLDRK
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794620, Length=196, Percent_Identity=41.3265306122449, Blast_Score=147, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17544594, Length=223, Percent_Identity=33.6322869955157, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24582217, Length=205, Percent_Identity=41.4634146341463, Blast_Score=147, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28508; Mature: 28508
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQNRLTDNDKLHEKIRSHRPLDAYEVKQLKEYYRIGLTWSSNALEGNSLTESETKVVL CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEE EDGITIGGKPLKDHFEAVGHSEAFDLLYKLAGSQEITEDDILGLHRLFYYRIQAETAGKY ECCCEECCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCCCC RDRNVIITGTDFTPPPPSDIPLTMQDFINSIPSLSLMHPVEYAAMLHLNLVTIHPFIDGN CCCEEEEECCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEEEECCC GRTARLLMNLALLQAGYPITIIPPIIRGDYISVLRDSNKGDNQPFVNFISCCVWESQKEY CCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHH LRLLESLDRK HHHHHHHCCC >Mature Secondary Structure MKYQNRLTDNDKLHEKIRSHRPLDAYEVKQLKEYYRIGLTWSSNALEGNSLTESETKVVL CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEE EDGITIGGKPLKDHFEAVGHSEAFDLLYKLAGSQEITEDDILGLHRLFYYRIQAETAGKY ECCCEECCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCCCC RDRNVIITGTDFTPPPPSDIPLTMQDFINSIPSLSLMHPVEYAAMLHLNLVTIHPFIDGN CCCEEEEECCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEEEECCC GRTARLLMNLALLQAGYPITIIPPIIRGDYISVLRDSNKGDNQPFVNFISCCVWESQKEY CCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHH LRLLESLDRK HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA