| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is lon1 [H]
Identifier: 118580698
GI number: 118580698
Start: 2459983
End: 2462022
Strand: Reverse
Name: lon1 [H]
Synonym: Ppro_2283
Alternate gene names: 118580698
Gene position: 2462022-2459983 (Counterclockwise)
Preceding gene: 118580699
Following gene: 118580697
Centisome position: 61.43
GC content: 52.6
Gene sequence:
>2040_bases ATGGATACCCAATTGAATTGCAGCCTGGACAGCCTCCTGAACCAGCACTTTGCCGGTAAGGTCGTCAGGAAAGACCTGAC CAAGCTGGTGAAGGAAGGGGCGAACGTTCCAGTCTATGTCCTGGAATACCTTCTGGGGATGTATTGCGCTTCGGATAACG AAGAGGTCATTCAGGACGGGTTGGTGAACGTCAAGAAGATACTGGCCGAGAACTATGTCCGTCCGGACGAAGCCGAGAAG GTGAAGTCCAAAATCCGCGAACTGGGAACCTATAAGGTCATCGACAAGGTTACGGTCAAGCTGAATGAAAAACGGGATAC CTATGAAGCTCTGCTGTCTAACCTGGGGGTGAAGGGGGTTGAGATCGCCAGTGGCACCGTCAAGAAGTACGAAAAGCTGC TGGTCGGCGGGATCTGGTGCATTGTCACCCTTAATTATTTCTACGAAGAGAATATGAAGGGCTCTCCTTTCAGCATCGGT GACCTGAAGCCGATTCAGATGCCGAACATGGACATGGAGGGGCTGTTTGAAGGTCGCAAGGCATTCAGCCAGGAACAGTG GATGGATGTTCTTGTCCGCTCCACCGGCATGGAACCTTCCGTGCTGGAGCAGCGGGTTAAGTGGCACCTGATCGCCAGAA TGATCCCCTTTGTCGAGAACGGCTATAACCTCTGTGAGCTTGGCCCGAGGGGAACCGGCAAGAGCCATATCTACAAGGAA ATCAGTCCGAACAGCATCCTTGTTTCCGGCGGACAGACGACCGTAGCCAATCTGTTCTACAACATGGGGTCGCATCAGGT TGGCCTTGTGGGTATGTGGGATGTGGTCGCCTTCGACGAAGTTGCAGGCATATCCTTCAAGGACAAAGATGGCGTCCAGA TCATGAAGGACTACATGGCTTCCGGTTCTTTTGCCAGGGGTAAAGATCAGATTTCCGCCAATGCTGCCATGGTCTTCGTC GGTAACATCAACCAACCGGTGGATACCTTGGTCAAAACCAGCCATCTGCTGGCACCATTCCCCGAGAGCATGATTGATTC AGCCTTCTTCGACCGCTTCCACTGCTACATCCCCGGCTGGGAAGTTCCGAAGATGCGGCCGGAGTTCTTCACCAACCAGT ATGGCTTGATTGTAGACTACCTTGCCGAATATCTGCGGGAGATGCGGAAGTACAATTTCTCGGATGCCATCGACAAGTTT TTCAAGCTGGGGAACAACCTCAACCAGCGGGATACCATCGCCGTTCGCCGAACGGTATCCGGGCTATTGAAGCTCCTGTA TCCCCATGGTGAATTTGACAAGGAAGCAGTACGCCAATGCCTGCACTATGCCTTGGAGGTCCGCAGGAGGATCAAGGAAC AGCTCAAGAAAATCGGTGGCATGGAATTTTACGACGTTCATTTCAGCTATATCGACAACGAAAGCATGGAAGAGCGCTTT ATCGGAGTTCCCGAGCAGGGAGGCAGCTCCCTCATCCCTGAAGGACAGCTGAAACCGGGTACGTTGCACACCGTATCAAC CGGATCTGGCGGCATGCTTGGCCTATATCGCCTTGAATTGCAGGTCATCGGCGGCAATGGGAAGTTGTCCCTGTCGGGGT TCGGCACATCCCAAAATGCGAAAGAGCCGGTCAAGGTGGCATTCGACTATTTCAAAGCCAATCTGACCAGGGTAAGCGGA ATCGCCAAGGCGATTGACCATGATTACCACATGCACATGGTTGAGCTGCATAATACCGGACCTGCATCGGCTTTGACCAT AGCCTCGTTTGTCTGTTTCTGTTCGGGGTTACTGGGCAAGCCGATACAAAGCCAAATGGTAATTCTGGGTGACATGAGCC TTGGGGGGAGCATTATTCCGGCGGAGAACCTGGCCGAATCGCTCCAGGTTGCTTTTGATGCAGGAGCAAAAAGGATTCTG ATTCCCATGAGCAGTGTCAAAGACATACCGACGATACCGGGGGAGTTGTTCGCCAAGTTCCAGACCAGTTTTTATGCTGA TCCGGTGGATGCGGTATTTAAGGCGCTGGGGGTGGATTAG
Upstream 100 bases:
>100_bases CTGGTGCTCCGTGATGCAGCGGACAAGACCGAAATCGAGCGGATTCCGCTGACGATTGATTTATCATTTGGAAATGAATT CTGACCATCAAGGAACCGGT
Downstream 100 bases:
>100_bases GACCATATGCATGAATACAAGAAAATCCGTTTCTCACTTAAGTCCCTTGCAAAGACGGGCTTAGCTTCAGAAGAAATCAG AAGCAAGTATTTCGGACATT
Product: ATP-dependent Lon-type protease
Products: NA
Alternate protein names: ATP-dependent protease La 1 [H]
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MDTQLNCSLDSLLNQHFAGKVVRKDLTKLVKEGANVPVYVLEYLLGMYCASDNEEVIQDGLVNVKKILAENYVRPDEAEK VKSKIRELGTYKVIDKVTVKLNEKRDTYEALLSNLGVKGVEIASGTVKKYEKLLVGGIWCIVTLNYFYEENMKGSPFSIG DLKPIQMPNMDMEGLFEGRKAFSQEQWMDVLVRSTGMEPSVLEQRVKWHLIARMIPFVENGYNLCELGPRGTGKSHIYKE ISPNSILVSGGQTTVANLFYNMGSHQVGLVGMWDVVAFDEVAGISFKDKDGVQIMKDYMASGSFARGKDQISANAAMVFV GNINQPVDTLVKTSHLLAPFPESMIDSAFFDRFHCYIPGWEVPKMRPEFFTNQYGLIVDYLAEYLREMRKYNFSDAIDKF FKLGNNLNQRDTIAVRRTVSGLLKLLYPHGEFDKEAVRQCLHYALEVRRRIKEQLKKIGGMEFYDVHFSYIDNESMEERF IGVPEQGGSSLIPEGQLKPGTLHTVSTGSGGMLGLYRLELQVIGGNGKLSLSGFGTSQNAKEPVKVAFDYFKANLTRVSG IAKAIDHDYHMHMVELHNTGPASALTIASFVCFCSGLLGKPIQSQMVILGDMSLGGSIIPAENLAESLQVAFDAGAKRIL IPMSSVKDIPTIPGELFAKFQTSFYADPVDAVFKALGVD
Sequences:
>Translated_679_residues MDTQLNCSLDSLLNQHFAGKVVRKDLTKLVKEGANVPVYVLEYLLGMYCASDNEEVIQDGLVNVKKILAENYVRPDEAEK VKSKIRELGTYKVIDKVTVKLNEKRDTYEALLSNLGVKGVEIASGTVKKYEKLLVGGIWCIVTLNYFYEENMKGSPFSIG DLKPIQMPNMDMEGLFEGRKAFSQEQWMDVLVRSTGMEPSVLEQRVKWHLIARMIPFVENGYNLCELGPRGTGKSHIYKE ISPNSILVSGGQTTVANLFYNMGSHQVGLVGMWDVVAFDEVAGISFKDKDGVQIMKDYMASGSFARGKDQISANAAMVFV GNINQPVDTLVKTSHLLAPFPESMIDSAFFDRFHCYIPGWEVPKMRPEFFTNQYGLIVDYLAEYLREMRKYNFSDAIDKF FKLGNNLNQRDTIAVRRTVSGLLKLLYPHGEFDKEAVRQCLHYALEVRRRIKEQLKKIGGMEFYDVHFSYIDNESMEERF IGVPEQGGSSLIPEGQLKPGTLHTVSTGSGGMLGLYRLELQVIGGNGKLSLSGFGTSQNAKEPVKVAFDYFKANLTRVSG IAKAIDHDYHMHMVELHNTGPASALTIASFVCFCSGLLGKPIQSQMVILGDMSLGGSIIPAENLAESLQVAFDAGAKRIL IPMSSVKDIPTIPGELFAKFQTSFYADPVDAVFKALGVD >Mature_679_residues MDTQLNCSLDSLLNQHFAGKVVRKDLTKLVKEGANVPVYVLEYLLGMYCASDNEEVIQDGLVNVKKILAENYVRPDEAEK VKSKIRELGTYKVIDKVTVKLNEKRDTYEALLSNLGVKGVEIASGTVKKYEKLLVGGIWCIVTLNYFYEENMKGSPFSIG DLKPIQMPNMDMEGLFEGRKAFSQEQWMDVLVRSTGMEPSVLEQRVKWHLIARMIPFVENGYNLCELGPRGTGKSHIYKE ISPNSILVSGGQTTVANLFYNMGSHQVGLVGMWDVVAFDEVAGISFKDKDGVQIMKDYMASGSFARGKDQISANAAMVFV GNINQPVDTLVKTSHLLAPFPESMIDSAFFDRFHCYIPGWEVPKMRPEFFTNQYGLIVDYLAEYLREMRKYNFSDAIDKF FKLGNNLNQRDTIAVRRTVSGLLKLLYPHGEFDKEAVRQCLHYALEVRRRIKEQLKKIGGMEFYDVHFSYIDNESMEERF IGVPEQGGSSLIPEGQLKPGTLHTVSTGSGGMLGLYRLELQVIGGNGKLSLSGFGTSQNAKEPVKVAFDYFKANLTRVSG IAKAIDHDYHMHMVELHNTGPASALTIASFVCFCSGLLGKPIQSQMVILGDMSLGGSIIPAENLAESLQVAFDAGAKRIL IPMSSVKDIPTIPGELFAKFQTSFYADPVDAVFKALGVD
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG4930
COG function: function code O; Predicted ATP-dependent Lon-type protease
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
None
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 75539; Mature: 75539
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTQLNCSLDSLLNQHFAGKVVRKDLTKLVKEGANVPVYVLEYLLGMYCASDNEEVIQDG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH LVNVKKILAENYVRPDEAEKVKSKIRELGTYKVIDKVTVKLNEKRDTYEALLSNLGVKGV HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHEEEEECCCCHHHHHHHHHCCCCCE EIASGTVKKYEKLLVGGIWCIVTLNYFYEENMKGSPFSIGDLKPIQMPNMDMEGLFEGRK EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH AFSQEQWMDVLVRSTGMEPSVLEQRVKWHLIARMIPFVENGYNLCELGPRGTGKSHIYKE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHC ISPNSILVSGGQTTVANLFYNMGSHQVGLVGMWDVVAFDEVAGISFKDKDGVQIMKDYMA CCCCEEEEECCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHH SGSFARGKDQISANAAMVFVGNINQPVDTLVKTSHLLAPFPESMIDSAFFDRFHCYIPGW CCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEECCCC EVPKMRPEFFTNQYGLIVDYLAEYLREMRKYNFSDAIDKFFKLGNNLNQRDTIAVRRTVS CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH GLLKLLYPHGEFDKEAVRQCLHYALEVRRRIKEQLKKIGGMEFYDVHFSYIDNESMEERF HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHH IGVPEQGGSSLIPEGQLKPGTLHTVSTGSGGMLGLYRLELQVIGGNGKLSLSGFGTSQNA CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCC KEPVKVAFDYFKANLTRVSGIAKAIDHDYHMHMVELHNTGPASALTIASFVCFCSGLLGK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC PIQSQMVILGDMSLGGSIIPAENLAESLQVAFDAGAKRILIPMSSVKDIPTIPGELFAKF CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCHHHHHHH QTSFYADPVDAVFKALGVD HHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MDTQLNCSLDSLLNQHFAGKVVRKDLTKLVKEGANVPVYVLEYLLGMYCASDNEEVIQDG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH LVNVKKILAENYVRPDEAEKVKSKIRELGTYKVIDKVTVKLNEKRDTYEALLSNLGVKGV HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHEEEEECCCCHHHHHHHHHCCCCCE EIASGTVKKYEKLLVGGIWCIVTLNYFYEENMKGSPFSIGDLKPIQMPNMDMEGLFEGRK EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH AFSQEQWMDVLVRSTGMEPSVLEQRVKWHLIARMIPFVENGYNLCELGPRGTGKSHIYKE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHC ISPNSILVSGGQTTVANLFYNMGSHQVGLVGMWDVVAFDEVAGISFKDKDGVQIMKDYMA CCCCEEEEECCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHH SGSFARGKDQISANAAMVFVGNINQPVDTLVKTSHLLAPFPESMIDSAFFDRFHCYIPGW CCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEECCCC EVPKMRPEFFTNQYGLIVDYLAEYLREMRKYNFSDAIDKFFKLGNNLNQRDTIAVRRTVS CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH GLLKLLYPHGEFDKEAVRQCLHYALEVRRRIKEQLKKIGGMEFYDVHFSYIDNESMEERF HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHH IGVPEQGGSSLIPEGQLKPGTLHTVSTGSGGMLGLYRLELQVIGGNGKLSLSGFGTSQNA CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCC KEPVKVAFDYFKANLTRVSGIAKAIDHDYHMHMVELHNTGPASALTIASFVCFCSGLLGK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC PIQSQMVILGDMSLGGSIIPAENLAESLQVAFDAGAKRILIPMSSVKDIPTIPGELFAKF CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCHHHHHHH QTSFYADPVDAVFKALGVD HHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA