Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is yvlD [H]

Identifier: 118580660

GI number: 118580660

Start: 2425416

End: 2425760

Strand: Direct

Name: yvlD [H]

Synonym: Ppro_2245

Alternate gene names: 118580660

Gene position: 2425416-2425760 (Clockwise)

Preceding gene: 118580659

Following gene: 118580662

Centisome position: 60.51

GC content: 56.52

Gene sequence:

>345_bases
ATGAAACAACTGCTGCTCAGATGGGTTTTGAATTCCTTTGCCCTGTTCTTCGTGATGAAACTGATTCCCGGCATCCAGAT
CGACCGTTTCGGCGACCTGATGCTGGCGACCCTGGTGATCGGCCTCTTGAACGCCTTCCTGCGGCCGCTGATCGTGCTGT
TCACCCTGCCGGTCACCATCGCCACCCTGGGGCTGTTCACCCTGGTGATCAACGGCGTTATCTTTGCCCTGGCCGCCCTG
CTTCTGAAGGGCTTCCATGTCACCGGATTCGGAACCGCCTTCGTGGCCGCCCTGCTCTTCAGCATCTTCAGCTTCATACT
GAACATGGTCTTCCGCACAAAATAA

Upstream 100 bases:

>100_bases
CAACGGCTACTTCGAGTTGTGGGGGGTGATGCTGGCCATCTCCCTGGGCATGGTGCTCTATTTCAAAAGAAAGCGGTGGC
TCTAACCACTTGGTGACGAC

Downstream 100 bases:

>100_bases
AACGGGTGGGGGTCATCCGTACAGGGACAATCTCTGGCGGGGACTGTCGGCATCCAGGAGGGCCTTCTTCTCGGCAGGAG
TCACGGCCTGTGACGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKQLLLRWVLNSFALFFVMKLIPGIQIDRFGDLMLATLVIGLLNAFLRPLIVLFTLPVTIATLGLFTLVINGVIFALAAL
LLKGFHVTGFGTAFVAALLFSIFSFILNMVFRTK

Sequences:

>Translated_114_residues
MKQLLLRWVLNSFALFFVMKLIPGIQIDRFGDLMLATLVIGLLNAFLRPLIVLFTLPVTIATLGLFTLVINGVIFALAAL
LLKGFHVTGFGTAFVAALLFSIFSFILNMVFRTK
>Mature_114_residues
MKQLLLRWVLNSFALFFVMKLIPGIQIDRFGDLMLATLVIGLLNAFLRPLIVLFTLPVTIATLGLFTLVINGVIFALAAL
LLKGFHVTGFGTAFVAALLFSIFSFILNMVFRTK

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 12635; Mature: 12635

Theoretical pI: Translated: 12.12; Mature: 12.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLLLRWVLNSFALFFVMKLIPGIQIDRFGDLMLATLVIGLLNAFLRPLIVLFTLPVTI
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLGLFTLVINGVIFALAALLLKGFHVTGFGTAFVAALLFSIFSFILNMVFRTK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQLLLRWVLNSFALFFVMKLIPGIQIDRFGDLMLATLVIGLLNAFLRPLIVLFTLPVTI
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLGLFTLVINGVIFALAALLLKGFHVTGFGTAFVAALLFSIFSFILNMVFRTK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]