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The map label for this gene is yigC [C]

Identifier: 118580652

GI number: 118580652

Start: 2414153

End: 2416015

Strand: Reverse

Name: yigC [C]

Synonym: Ppro_2237

Alternate gene names: 118580652

Gene position: 2416015-2414153 (Counterclockwise)

Preceding gene: 118580661

Following gene: 118580651

Centisome position: 60.28

GC content: 65.32

Gene sequence:

>1863_bases
ATGATCTATCCGGGAGGAGTGGTGGGGTATCGCAATCTTCAGCAGTGTGTGGCGGATCTGGAACGACGGGGGATGCTGGT
GCGCATCGAGGCGCCACTGGATCCCAACCTGGAGATCGGCGCCGTGCAGCGGCGCTGCTACCAGCGGGGCGGTCCGGCAC
TGCTCTTCACCAATCCGGTCAACTGCCGCTTTCCGCTTCTGGGCAACCTGTTCGGCACCCTGGAGCGGACCCGCTTCATC
TTCCGCGACACCCTGGACGACATCCGGCGCCTGGTGGAGCTGAAGGTCGATCCCTTTTCCCTCCTCAAACATCCCCTTGA
TCTGCTCAAGGCCCCCTGTGCTGCCTGGCATCTGCTCCCGACGTTTTCCTCCCGGGCGCCGGTGATGGAGTGCCGCACGA
CTCTCTCCCGCCTCCCCCAGTTGGTCTCCTGGCCTAAGGATGGCGGCGCCTTCATCACCCTGCCGCAGGTCTATACGGAA
AACCCCTCGAAACCGGGTTTCGGGTCATCCAACCTGGGCATGTACCGGGTGCAGATCTCCGGCAACAACTACGAGCCGGA
CAGGCAGGTCGGCCTGCACTACCAGATCCACCGGGGCATCGGCGGCCACCACGCCGAAGCCATCGCCCGTGGCGAGCCGC
TTAAGGTCAACATCTTCGTGGGCGGGCCGCCGGCAATGACCCTGGCCGCGGTGATGCCGCTCCCCGAGGGGATGCCGGAA
CTCTCCTTTGCCGGCCTGCTGGGGGGACAGCGCATTCCCATGGCCCGCATGGAGGGGCAGCTGCCGGTGCTGGCCGAGGC
CGACTTCTGCATCCGCGGCTTGGTGCATCCGGACAGGACCCTCCCCGAAGGGCCCTTCGGCGACCATCTCGGTTACTACA
GCTTGGCCCATGAGTTCCCCTATGTGCAGGTGGAGGAGGTCCTTCATCGTCGCGACGCCATCTGGCCCTTTACCACCGTG
GGGCGACCTCCCCAGGAGGATACCAGCTTCGGCGCCTTTATCCACGAACTGACCGGGCCGCTGATTCCCACGGTGGTGGC
GGGGGTGAAAGAGGTGCATGCCGTGGATGCGGCAGGCGTGCATCCGCTGCTCCTGGCCATTGCCAGCGAACGCTACGTCC
CCTATGCGCCCCGACGCCAGCCCCAGGAGCTTCTGACCATTGCCAATGCCATCCTGGGGCAGGGGCAACTCTCCCTGGCC
AAGTATCTCTTCGTGGCTGCCCAGGAGGATGCACCTGATCTGCACACCCACGATGTGGCTTCCTTTCTCGGCCATATGCT
GGAACGGGCCGACTGGCGCTGCCATCTGCACTTCCAGACCGCCACGACCATCGATACCCTGGACTACAGCGGCTCCGGCC
TGAACCAAGGCTCAAAGCTGGTGATCGCCGTTGCCGGCCCGCAACTGCGCGTGCTGGGACAGCAGGTTCCGGCCGGTCTG
GAGTTCCCCGCCGGTTTCGGGGGAGCCCGGGTCTGCCTCCCCGGCATACTGGCCATCCAGGGGCCGGCGTCCCGGCAGGG
GAGGGGGGAGTGCGACGCGTCGATCGAGACGTTCTGCAACTTCTACGGAGAGCGGGACCGCTTCGACGGCTTTCCGCTGA
TCGTGATCTGCGACGACTGTGACTTTACGGCTGACACGCTGAACAATTTCCTCTGGGTGACCTTCACCCGATCCAACCCG
GAAACGGACCTGTACGGCATCCGCAGCCTGACCCGCGGACGTCACTGGGGGTGCCAGGGAGCGCTGGTGATCGACGCGCG
CATCAAGCCGTTCCACGCCCCACCCCTGGAGGATGACCCCGAGGTGGAGCGCCGCATCGATAGCCTGGCGGTCAAGGGAG
GTCCGCTGGAAGGGCTGGTATAG

Upstream 100 bases:

>100_bases
CTGAGTCAGCAAGAACACATTTTTATGTACAATGGCAAGAGAAAATCAGATACTGTCGCCGCCCGTTTGATAGGGCAATG
CTGTGTGAATTATTCTGAAA

Downstream 100 bases:

>100_bases
CTGTCTCCGCAAATCGCTTGACTTGGTAGACCGATCAGTCTATTTTGTGCCCAGGATATACCTGAACCCGTGCCACGATA
CTGTTTCGCTCGGCAACCCC

Product: carboxylyase-like protein

Products: NA

Alternate protein names: 4-hydroxybenzoate DC; HBDC [H]

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MIYPGGVVGYRNLQQCVADLERRGMLVRIEAPLDPNLEIGAVQRRCYQRGGPALLFTNPVNCRFPLLGNLFGTLERTRFI
FRDTLDDIRRLVELKVDPFSLLKHPLDLLKAPCAAWHLLPTFSSRAPVMECRTTLSRLPQLVSWPKDGGAFITLPQVYTE
NPSKPGFGSSNLGMYRVQISGNNYEPDRQVGLHYQIHRGIGGHHAEAIARGEPLKVNIFVGGPPAMTLAAVMPLPEGMPE
LSFAGLLGGQRIPMARMEGQLPVLAEADFCIRGLVHPDRTLPEGPFGDHLGYYSLAHEFPYVQVEEVLHRRDAIWPFTTV
GRPPQEDTSFGAFIHELTGPLIPTVVAGVKEVHAVDAAGVHPLLLAIASERYVPYAPRRQPQELLTIANAILGQGQLSLA
KYLFVAAQEDAPDLHTHDVASFLGHMLERADWRCHLHFQTATTIDTLDYSGSGLNQGSKLVIAVAGPQLRVLGQQVPAGL
EFPAGFGGARVCLPGILAIQGPASRQGRGECDASIETFCNFYGERDRFDGFPLIVICDDCDFTADTLNNFLWVTFTRSNP
ETDLYGIRSLTRGRHWGCQGALVIDARIKPFHAPPLEDDPEVERRIDSLAVKGGPLEGLV

Sequences:

>Translated_620_residues
MIYPGGVVGYRNLQQCVADLERRGMLVRIEAPLDPNLEIGAVQRRCYQRGGPALLFTNPVNCRFPLLGNLFGTLERTRFI
FRDTLDDIRRLVELKVDPFSLLKHPLDLLKAPCAAWHLLPTFSSRAPVMECRTTLSRLPQLVSWPKDGGAFITLPQVYTE
NPSKPGFGSSNLGMYRVQISGNNYEPDRQVGLHYQIHRGIGGHHAEAIARGEPLKVNIFVGGPPAMTLAAVMPLPEGMPE
LSFAGLLGGQRIPMARMEGQLPVLAEADFCIRGLVHPDRTLPEGPFGDHLGYYSLAHEFPYVQVEEVLHRRDAIWPFTTV
GRPPQEDTSFGAFIHELTGPLIPTVVAGVKEVHAVDAAGVHPLLLAIASERYVPYAPRRQPQELLTIANAILGQGQLSLA
KYLFVAAQEDAPDLHTHDVASFLGHMLERADWRCHLHFQTATTIDTLDYSGSGLNQGSKLVIAVAGPQLRVLGQQVPAGL
EFPAGFGGARVCLPGILAIQGPASRQGRGECDASIETFCNFYGERDRFDGFPLIVICDDCDFTADTLNNFLWVTFTRSNP
ETDLYGIRSLTRGRHWGCQGALVIDARIKPFHAPPLEDDPEVERRIDSLAVKGGPLEGLV
>Mature_620_residues
MIYPGGVVGYRNLQQCVADLERRGMLVRIEAPLDPNLEIGAVQRRCYQRGGPALLFTNPVNCRFPLLGNLFGTLERTRFI
FRDTLDDIRRLVELKVDPFSLLKHPLDLLKAPCAAWHLLPTFSSRAPVMECRTTLSRLPQLVSWPKDGGAFITLPQVYTE
NPSKPGFGSSNLGMYRVQISGNNYEPDRQVGLHYQIHRGIGGHHAEAIARGEPLKVNIFVGGPPAMTLAAVMPLPEGMPE
LSFAGLLGGQRIPMARMEGQLPVLAEADFCIRGLVHPDRTLPEGPFGDHLGYYSLAHEFPYVQVEEVLHRRDAIWPFTTV
GRPPQEDTSFGAFIHELTGPLIPTVVAGVKEVHAVDAAGVHPLLLAIASERYVPYAPRRQPQELLTIANAILGQGQLSLA
KYLFVAAQEDAPDLHTHDVASFLGHMLERADWRCHLHFQTATTIDTLDYSGSGLNQGSKLVIAVAGPQLRVLGQQVPAGL
EFPAGFGGARVCLPGILAIQGPASRQGRGECDASIETFCNFYGERDRFDGFPLIVICDDCDFTADTLNNFLWVTFTRSNP
ETDLYGIRSLTRGRHWGCQGALVIDARIKPFHAPPLEDDPEVERRIDSLAVKGGPLEGLV

Specific function: Catalyzes the reversible decarboxylation of 4- hydroxybenzoate [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=469, Percent_Identity=28.7846481876333, Blast_Score=176, Evalue=4e-45,
Organism=Saccharomyces cerevisiae, GI6320748, Length=350, Percent_Identity=26.8571428571429, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: =4.1.1.61 [H]

Molecular weight: Translated: 68153; Mature: 68153

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYPGGVVGYRNLQQCVADLERRGMLVRIEAPLDPNLEIGAVQRRCYQRGGPALLFTNPV
CCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCC
NCRFPLLGNLFGTLERTRFIFRDTLDDIRRLVELKVDPFSLLKHPLDLLKAPCAAWHLLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHC
TFSSRAPVMECRTTLSRLPQLVSWPKDGGAFITLPQVYTENPSKPGFGSSNLGMYRVQIS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHCCCCCCCCCCCCCCCCEEEEEEC
GNNYEPDRQVGLHYQIHRGIGGHHAEAIARGEPLKVNIFVGGPPAMTLAAVMPLPEGMPE
CCCCCCCHHCCCEEEEECCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCCC
LSFAGLLGGQRIPMARMEGQLPVLAEADFCIRGLVHPDRTLPEGPFGDHLGYYSLAHEFP
HHHHHHCCCCCCCHHHHCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCC
YVQVEEVLHRRDAIWPFTTVGRPPQEDTSFGAFIHELTGPLIPTVVAGVKEVHAVDAAGV
CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCH
HPLLLAIASERYVPYAPRRQPQELLTIANAILGQGQLSLAKYLFVAAQEDAPDLHTHDVA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCHHHHHH
SFLGHMLERADWRCHLHFQTATTIDTLDYSGSGLNQGSKLVIAVAGPQLRVLGQQVPAGL
HHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCCCCCEEEEEECCCCEEEHHHHCCCCC
EFPAGFGGARVCLPGILAIQGPASRQGRGECDASIETFCNFYGERDRFDGFPLIVICDDC
CCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCC
DFTADTLNNFLWVTFTRSNPETDLYGIRSLTRGRHWGCQGALVIDARIKPFHAPPLEDDP
CCCHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCH
EVERRIDSLAVKGGPLEGLV
HHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIYPGGVVGYRNLQQCVADLERRGMLVRIEAPLDPNLEIGAVQRRCYQRGGPALLFTNPV
CCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCC
NCRFPLLGNLFGTLERTRFIFRDTLDDIRRLVELKVDPFSLLKHPLDLLKAPCAAWHLLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHC
TFSSRAPVMECRTTLSRLPQLVSWPKDGGAFITLPQVYTENPSKPGFGSSNLGMYRVQIS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHCCCCCCCCCCCCCCCCEEEEEEC
GNNYEPDRQVGLHYQIHRGIGGHHAEAIARGEPLKVNIFVGGPPAMTLAAVMPLPEGMPE
CCCCCCCHHCCCEEEEECCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCCC
LSFAGLLGGQRIPMARMEGQLPVLAEADFCIRGLVHPDRTLPEGPFGDHLGYYSLAHEFP
HHHHHHCCCCCCCHHHHCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCC
YVQVEEVLHRRDAIWPFTTVGRPPQEDTSFGAFIHELTGPLIPTVVAGVKEVHAVDAAGV
CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCH
HPLLLAIASERYVPYAPRRQPQELLTIANAILGQGQLSLAKYLFVAAQEDAPDLHTHDVA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCHHHHHH
SFLGHMLERADWRCHLHFQTATTIDTLDYSGSGLNQGSKLVIAVAGPQLRVLGQQVPAGL
HHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCCCCCEEEEEECCCCEEEHHHHCCCCC
EFPAGFGGARVCLPGILAIQGPASRQGRGECDASIETFCNFYGERDRFDGFPLIVICDDC
CCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCC
DFTADTLNNFLWVTFTRSNPETDLYGIRSLTRGRHWGCQGALVIDARIKPFHAPPLEDDP
CCCHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCH
EVERRIDSLAVKGGPLEGLV
HHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]