| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580650
Identifier: 118580650
GI number: 118580650
Start: 2411816
End: 2413006
Strand: Reverse
Name: 118580650
Synonym: Ppro_2235
Alternate gene names: NA
Gene position: 2413006-2411816 (Counterclockwise)
Preceding gene: 118580651
Following gene: 118580649
Centisome position: 60.2
GC content: 63.06
Gene sequence:
>1191_bases ATGTTTGTATCCTTCTTCTTTACGCTGCGGGAACGGGGCATCCCGGTGACCCCCACCGCCTTTCTCCGTCTGCAGAAGGC CCTGGGGCTGGGGCTGATCACCTCCCTGGACGATTTCTATTCCGTGGCCCGTTCCCTGCTGGTCAAGAGCGAGCGTGATT TTGACATCTATGATCAGGTCTTTGCCGAGCTGTTCCGCGGGGCCGAGAGCGCGGACGAGGCCCAAGTCATGCTGGATCAG GCGGTGCGCCAACTGCTGGAGGAGTGGCTGAAGGAACCGGCCGAACTGGCCAAGGCTCTTGGGTTGACCGAACAGGAACT GGCTTCCTTAAGCGGCGAGGAGCTGAAGCAGTATTTCCTCGACCGGCTCAAGGACCAGAAGGGGGTCCACCACGGCGGCT CGCGCTGGATCGGCACCGGCGGTGTCTCGCCGGTGGGCCATGGCGGCAGCCGCCCCGGCGGCATGCGCATCGGCGGTGTC TCGCGCAAGAGCTCGGCCTTAAAGACCGCCATGGAACGCCGCTACCGGGACTACTCCCAGGATGCTCCCCTGACCCGCTC CCAGATGGGCGAGGCCCTCAAACGCCTGCGCCACTTGACCCCTTCGGGCCCCCGGGATCAGGTCAACGTTGACAAGAGCA TCTACCAGACCATGCGCAATGCCGGCGAAGTCGAGATCGTTTTCGACCGCCGGCTGAAGGACAAGCTCAACGTGCTGCTC TTGATCGACAACGGCGGCTGGTCCATGGACCCCTACGTGGAGATCGTTCAGGCGCTGTTTCACTATGCCGAGGCCCAGTT CCGGGATCTGTCCATCTACTACTACCACAATACCATCATGGATCGGGTCTGGCGCGACCCCCAGCGTCGCCGGCAACCGG AGCGGGTGGAGAGTCTGCTGAGCCGCGACCCGGAGACCCGCCTGATCTTCGTGGGCGATGCCAGCATGGCCCTGGAGGAG CTGACCCAGATCAAGGGGAGCATCAGCATCGAGACCAGGCAGACCCGGACCAGCCTCACCTGGCTGAACATGCTGGCCAC AAGCTTCCGCCACAGCGTCTGGCTGAACCCCAAATGCAGCTCCCTGTGGGATTACAGCACGACCATCGCTATGATCGGCC AGATCTTTCCCATGTTCCCCCTGACCCTCACCGGCCTGGAAAAGGCCGTGGCACAACTCGGCAGGCGCTGA
Upstream 100 bases:
>100_bases GCCGATGAGGCGCTCCCCTATCTGGGGGTTTTGTTCAAGAAGAGCAGCGACCTTGAGCGGGCTTCCTCGTTCACGACGGC GTAGAGCGGGAGAGCTAGCC
Downstream 100 bases:
>100_bases TCCGTACGGCGTTCCCGCCGGCTCCTGTTCTTTTCATGAAAATGTTGCATACTATGTATCATATCCGCCGCTTGGGCGGA TCAGCCCGCGGCGATAACGC
Product: VWA containing CoxE family protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MFVSFFFTLRERGIPVTPTAFLRLQKALGLGLITSLDDFYSVARSLLVKSERDFDIYDQVFAELFRGAESADEAQVMLDQ AVRQLLEEWLKEPAELAKALGLTEQELASLSGEELKQYFLDRLKDQKGVHHGGSRWIGTGGVSPVGHGGSRPGGMRIGGV SRKSSALKTAMERRYRDYSQDAPLTRSQMGEALKRLRHLTPSGPRDQVNVDKSIYQTMRNAGEVEIVFDRRLKDKLNVLL LIDNGGWSMDPYVEIVQALFHYAEAQFRDLSIYYYHNTIMDRVWRDPQRRRQPERVESLLSRDPETRLIFVGDASMALEE LTQIKGSISIETRQTRTSLTWLNMLATSFRHSVWLNPKCSSLWDYSTTIAMIGQIFPMFPLTLTGLEKAVAQLGRR
Sequences:
>Translated_396_residues MFVSFFFTLRERGIPVTPTAFLRLQKALGLGLITSLDDFYSVARSLLVKSERDFDIYDQVFAELFRGAESADEAQVMLDQ AVRQLLEEWLKEPAELAKALGLTEQELASLSGEELKQYFLDRLKDQKGVHHGGSRWIGTGGVSPVGHGGSRPGGMRIGGV SRKSSALKTAMERRYRDYSQDAPLTRSQMGEALKRLRHLTPSGPRDQVNVDKSIYQTMRNAGEVEIVFDRRLKDKLNVLL LIDNGGWSMDPYVEIVQALFHYAEAQFRDLSIYYYHNTIMDRVWRDPQRRRQPERVESLLSRDPETRLIFVGDASMALEE LTQIKGSISIETRQTRTSLTWLNMLATSFRHSVWLNPKCSSLWDYSTTIAMIGQIFPMFPLTLTGLEKAVAQLGRR >Mature_396_residues MFVSFFFTLRERGIPVTPTAFLRLQKALGLGLITSLDDFYSVARSLLVKSERDFDIYDQVFAELFRGAESADEAQVMLDQ AVRQLLEEWLKEPAELAKALGLTEQELASLSGEELKQYFLDRLKDQKGVHHGGSRWIGTGGVSPVGHGGSRPGGMRIGGV SRKSSALKTAMERRYRDYSQDAPLTRSQMGEALKRLRHLTPSGPRDQVNVDKSIYQTMRNAGEVEIVFDRRLKDKLNVLL LIDNGGWSMDPYVEIVQALFHYAEAQFRDLSIYYYHNTIMDRVWRDPQRRRQPERVESLLSRDPETRLIFVGDASMALEE LTQIKGSISIETRQTRTSLTWLNMLATSFRHSVWLNPKCSSLWDYSTTIAMIGQIFPMFPLTLTGLEKAVAQLGRR
Specific function: Unknown
COG id: COG3825
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45090; Mature: 45090
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVSFFFTLRERGIPVTPTAFLRLQKALGLGLITSLDDFYSVARSLLVKSERDFDIYDQV CEEHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FAELFRGAESADEAQVMLDQAVRQLLEEWLKEPAELAKALGLTEQELASLSGEELKQYFL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHH DRLKDQKGVHHGGSRWIGTGGVSPVGHGGSRPGGMRIGGVSRKSSALKTAMERRYRDYSQ HHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCC DAPLTRSQMGEALKRLRHLTPSGPRDQVNVDKSIYQTMRNAGEVEIVFDRRLKDKLNVLL CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHCCCCEEE LIDNGGWSMDPYVEIVQALFHYAEAQFRDLSIYYYHNTIMDRVWRDPQRRRQPERVESLL EEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHCCHHHCCCHHHHHHHH SRDPETRLIFVGDASMALEELTQIKGSISIETRQTRTSLTWLNMLATSFRHSVWLNPKCS CCCCCCEEEEECCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCEECCCCCC SLWDYSTTIAMIGQIFPMFPLTLTGLEKAVAQLGRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFVSFFFTLRERGIPVTPTAFLRLQKALGLGLITSLDDFYSVARSLLVKSERDFDIYDQV CEEHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FAELFRGAESADEAQVMLDQAVRQLLEEWLKEPAELAKALGLTEQELASLSGEELKQYFL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHH DRLKDQKGVHHGGSRWIGTGGVSPVGHGGSRPGGMRIGGVSRKSSALKTAMERRYRDYSQ HHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCC DAPLTRSQMGEALKRLRHLTPSGPRDQVNVDKSIYQTMRNAGEVEIVFDRRLKDKLNVLL CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHCCCCEEE LIDNGGWSMDPYVEIVQALFHYAEAQFRDLSIYYYHNTIMDRVWRDPQRRRQPERVESLL EEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHCCHHHCCCHHHHHHHH SRDPETRLIFVGDASMALEELTQIKGSISIETRQTRTSLTWLNMLATSFRHSVWLNPKCS CCCCCCEEEEECCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCEECCCCCC SLWDYSTTIAMIGQIFPMFPLTLTGLEKAVAQLGRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA