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The map label for this gene is rnfC [C]

Identifier: 118580644

GI number: 118580644

Start: 2404298

End: 2404468

Strand: Reverse

Name: rnfC [C]

Synonym: Ppro_2229

Alternate gene names: 118580644

Gene position: 2404468-2404298 (Counterclockwise)

Preceding gene: 118580646

Following gene: 118580641

Centisome position: 59.99

GC content: 50.88

Gene sequence:

>171_bases
GTGGCACATTCCATTAATGACGATTGCATCAACTGTGGAGCATGTGATGATTCCTGCCCGGTAAACGCCATCAGTGAGCA
GGACGGTAAGCGTGTAATTGACGCTGATACCTGCATCGACTGTGGCGCTTGCGTGGACACCTGTCCCGTAAATGCTATTC
TGGGTCACTAA

Upstream 100 bases:

>100_bases
TGTTCTGATGCTGTTTTTTTTCTGGACATTCGCTGGGGGGCATGGTAAACAAACCACTGTTTTCGATCCAAGAAGACATA
TCCTACAAGGAGGTGAAACC

Downstream 100 bases:

>100_bases
GCCGTACCATCGCATCATGCATCGAAAAGCCCGTGTTCGCACGGGCTTTTTTGTGTGCTCTGCCGATGGCTGTTAACCGT
TATGTAGCTGAATATATTCA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MAHSINDDCINCGACDDSCPVNAISEQDGKRVIDADTCIDCGACVDTCPVNAILGH

Sequences:

>Translated_56_residues
MAHSINDDCINCGACDDSCPVNAISEQDGKRVIDADTCIDCGACVDTCPVNAILGH
>Mature_55_residues
AHSINDDCINCGACDDSCPVNAISEQDGKRVIDADTCIDCGACVDTCPVNAILGH

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Inner membrane-associated (By similarity) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 5783; Mature: 5652

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

14.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
16.1 %Cys+Met (Translated Protein)
14.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
14.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHSINDDCINCGACDDSCPVNAISEQDGKRVIDADTCIDCGACVDTCPVNAILGH
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHSINDDCINCGACDDSCPVNAISEQDGKRVIDADTCIDCGACVDTCPVNAILGH
CCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 4Fe-4S clusters [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 4433520 [H]