Click here to switch to the map view.

The map label for this gene is ybaR [H]

Identifier: 118580623

GI number: 118580623

Start: 2384171

End: 2385709

Strand: Reverse

Name: ybaR [H]

Synonym: Ppro_2208

Alternate gene names: 118580623

Gene position: 2385709-2384171 (Counterclockwise)

Preceding gene: 118580624

Following gene: 118580615

Centisome position: 59.52

GC content: 54.32

Gene sequence:

>1539_bases
ATGACATTTATTGAAGCAATGAAAAGTTCACATCTCAACGCCAAGAACGAAATCCTGTCCGGACTGACTGTTGCCATTGC
TCTTGTCCCCGAAGCTGTTGCCTTCTCGCTCATCGCCAACGTAAGCCCCCTGGTGGGGCTCTATTCTGCATTCATCATTG
GCCTCATCACCGCGCTTTTCGGTGGACGGCCAGGTATGATTTCAGGAGCAACCGGCGCTGTAGCCGTCGTCGTCGTCAGC
CTGGTTGCCAGACATGGCGTGGAATACCTGTTTGCAGCCGTCGTACTCATGGGGCTCATCCAGATAAGTGTCGGCCTGTT
TCGTCTGGGCAAATTCATCCGCCTGGTGCCGCACCCGGTCATGTTCGGATTCGTCAACGGCCTGGCAATTGTGATATTCA
TGTCTCAACTCAACCAGTTCAAGGTTGCCGGACCGGGTAACGCGTTGTCCTGGGTAACAGGCACGCCGCTGTGGATCATG
CTGGGCTTTGTCCTTGCTACCATGGCAATCATCCACTTCCTGCCCAAGTTCACCAAGGCCGTTCCCGCCTCGCTTGCTGC
TATTGTCATTGTGTCAGCGGTCATTATCTATTTTGGAATCCCCACCCGAACCGTCGGCGATATCGCTTCCATATCCGGCG
GACTCCCCCAGTTTCACTTTCCCTTGGCGCCATTGAACTTCGAGACGCTGAGGATAATCTTCCCCTATTCGCTGATCATG
GCCATGGTGGGACTGATCGAAAGCCTGCTGACCCTGGCCGTGGTTGATGAAATGACGGAAACCCGCGGACGCGGCAACAG
GGAATGCCTTGCCCAAGGCGCCGCCAACGTGCTGACGGGGTTTTTCGGCGGTATGGGCGGTTGCGCCATGATCGGACAGA
GCATTATCAACGTCAGTTCGGGAGGCAGGAAGCGGTTGTCGGGAATCGTGGCCGCTGTTGGGCTGTTGCTTTTTATTCTG
GTAGGTGCGCCACTGATCGAAAAAATCCCCATGGCGGCGCTGGTTGGGCTTATGTTCATGGTGGCTATCGGAACCTTTGA
ATGGGCCAGCCTGAGAATCATCCGCAAAGTACCTGCCGCCGATGTGTTCGTCATGGTTCTTGTTGCTGGGGTAACGGTGC
TCTTCCACAATCTGGCGTTGGCCGTTCTGATCGGCGTGGTGATCTCGGCCCTGGTTTTCGCCTGGCAAAACGCCACCAGA
ATTCGGGCCAGGAAGCACATCAACATAGACGGCGTCAAGCATTACCACATTTACGGTCCGTTGTTTTTCGGGTCTGTCGC
GGCGTTCCAGGAAAAGTTTGATGTACTGAACGACCCTCAGGAGGTCATCATTGATTTTGAGGAATCAAGGGTGGTTGACC
ACTCCGCCATCGAAGCCCTCAACAGAACCACGGAACGATATGCCAAGGTGGGAAAAAAGGTGCACCTGCGCCATTTGAGT
GAAGACTGCCGCAAATTGCTGGATAACGCTTCTTCCATTATAGATGTGAATTATTGGGAGGATCCGAAATACAAGCTGGT
GCTGGACGCCCTGGAATAG

Upstream 100 bases:

>100_bases
TGGTTCACTGTGCCGGTTGTGTTTGATGGCATATGCGCCAATCTGTCCCTGGGATGTCCCGTCGCCTGCGGGAAACTCAA
TTCACCGGTAAAGGAACCGC

Downstream 100 bases:

>100_bases
TTTCGGATGGAACCGCCCCGCACAGTAATACCTCATCAAGCATGTGTAGGATGCCTGTCCCTGAATAAACGTCCTGAAAA
AAGTGAAACTCCGCGATTTA

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MTFIEAMKSSHLNAKNEILSGLTVAIALVPEAVAFSLIANVSPLVGLYSAFIIGLITALFGGRPGMISGATGAVAVVVVS
LVARHGVEYLFAAVVLMGLIQISVGLFRLGKFIRLVPHPVMFGFVNGLAIVIFMSQLNQFKVAGPGNALSWVTGTPLWIM
LGFVLATMAIIHFLPKFTKAVPASLAAIVIVSAVIIYFGIPTRTVGDIASISGGLPQFHFPLAPLNFETLRIIFPYSLIM
AMVGLIESLLTLAVVDEMTETRGRGNRECLAQGAANVLTGFFGGMGGCAMIGQSIINVSSGGRKRLSGIVAAVGLLLFIL
VGAPLIEKIPMAALVGLMFMVAIGTFEWASLRIIRKVPAADVFVMVLVAGVTVLFHNLALAVLIGVVISALVFAWQNATR
IRARKHINIDGVKHYHIYGPLFFGSVAAFQEKFDVLNDPQEVIIDFEESRVVDHSAIEALNRTTERYAKVGKKVHLRHLS
EDCRKLLDNASSIIDVNYWEDPKYKLVLDALE

Sequences:

>Translated_512_residues
MTFIEAMKSSHLNAKNEILSGLTVAIALVPEAVAFSLIANVSPLVGLYSAFIIGLITALFGGRPGMISGATGAVAVVVVS
LVARHGVEYLFAAVVLMGLIQISVGLFRLGKFIRLVPHPVMFGFVNGLAIVIFMSQLNQFKVAGPGNALSWVTGTPLWIM
LGFVLATMAIIHFLPKFTKAVPASLAAIVIVSAVIIYFGIPTRTVGDIASISGGLPQFHFPLAPLNFETLRIIFPYSLIM
AMVGLIESLLTLAVVDEMTETRGRGNRECLAQGAANVLTGFFGGMGGCAMIGQSIINVSSGGRKRLSGIVAAVGLLLFIL
VGAPLIEKIPMAALVGLMFMVAIGTFEWASLRIIRKVPAADVFVMVLVAGVTVLFHNLALAVLIGVVISALVFAWQNATR
IRARKHINIDGVKHYHIYGPLFFGSVAAFQEKFDVLNDPQEVIIDFEESRVVDHSAIEALNRTTERYAKVGKKVHLRHLS
EDCRKLLDNASSIIDVNYWEDPKYKLVLDALE
>Mature_511_residues
TFIEAMKSSHLNAKNEILSGLTVAIALVPEAVAFSLIANVSPLVGLYSAFIIGLITALFGGRPGMISGATGAVAVVVVSL
VARHGVEYLFAAVVLMGLIQISVGLFRLGKFIRLVPHPVMFGFVNGLAIVIFMSQLNQFKVAGPGNALSWVTGTPLWIML
GFVLATMAIIHFLPKFTKAVPASLAAIVIVSAVIIYFGIPTRTVGDIASISGGLPQFHFPLAPLNFETLRIIFPYSLIMA
MVGLIESLLTLAVVDEMTETRGRGNRECLAQGAANVLTGFFGGMGGCAMIGQSIINVSSGGRKRLSGIVAAVGLLLFILV
GAPLIEKIPMAALVGLMFMVAIGTFEWASLRIIRKVPAADVFVMVLVAGVTVLFHNLALAVLIGVVISALVFAWQNATRI
RARKHINIDGVKHYHIYGPLFFGSVAAFQEKFDVLNDPQEVIIDFEESRVVDHSAIEALNRTTERYAKVGKKVHLRHLSE
DCRKLLDNASSIIDVNYWEDPKYKLVLDALE

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI4557535, Length=490, Percent_Identity=23.8775510204082, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI47131207, Length=502, Percent_Identity=23.3067729083665, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI20336272, Length=502, Percent_Identity=23.3067729083665, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI39752683, Length=473, Percent_Identity=21.9873150105708, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI45827800, Length=473, Percent_Identity=21.9873150105708, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI94721259, Length=415, Percent_Identity=21.9277108433735, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI94721255, Length=415, Percent_Identity=21.9277108433735, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI94721253, Length=415, Percent_Identity=21.9277108433735, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI94721257, Length=415, Percent_Identity=21.9277108433735, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI269784651, Length=592, Percent_Identity=21.1148648648649, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI45827802, Length=430, Percent_Identity=22.5581395348837, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI4505697, Length=489, Percent_Identity=20.8588957055215, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI87081859, Length=496, Percent_Identity=29.8387096774194, Blast_Score=163, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17566848, Length=546, Percent_Identity=22.8937728937729, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI86564196, Length=487, Percent_Identity=20.1232032854209, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI86565215, Length=381, Percent_Identity=23.0971128608924, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=415, Percent_Identity=23.1325301204819, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21355087, Length=413, Percent_Identity=21.5496368038741, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24647160, Length=413, Percent_Identity=21.5496368038741, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21358633, Length=529, Percent_Identity=20.6049149338374, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI85815873, Length=412, Percent_Identity=24.0291262135922, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI19922482, Length=484, Percent_Identity=23.1404958677686, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21358229, Length=455, Percent_Identity=24.8351648351648, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24663084, Length=131, Percent_Identity=28.2442748091603, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21357695, Length=131, Percent_Identity=28.2442748091603, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 55080; Mature: 54949

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCEEEEECCCCCCCEEEEECCC
>Mature Secondary Structure 
TFIEAMKSSHLNAKNEILSGLTVAIALVPEAVAFSLIANVSPLVGLYSAFIIGLITALF
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH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HHHHHHHHCCCCEEEEECCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]