Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118580584

Identifier: 118580584

GI number: 118580584

Start: 2338096

End: 2339331

Strand: Direct

Name: 118580584

Synonym: Ppro_2168

Alternate gene names: NA

Gene position: 2338096-2339331 (Clockwise)

Preceding gene: 118580583

Following gene: 118580585

Centisome position: 58.34

GC content: 61.65

Gene sequence:

>1236_bases
ATGATGACACCATCGGCTTCCAACAAACAAAAGCAGCCCTTCGCGCTGGTAATCGGCCTCGATCACGTGAACGGCATCCA
GACGGCGCGCATACTGGCCGATCGCGGCGTAGCAGTCATCGGTGTTGCCAAGGATCCGGAGCACTACTGCTGCCGGACGC
GGGTCTGCTCGCGCATCGTCTTCACCGACACCACCAGCGATGCGCTGATCGACTCACTGGAAACACTGGGGCCAGAACTA
GGAGAGAAGGGGGTCCTGTTCCCCTGCCTGGATCCCCAGGTACTTCTGGTGTCACGCAATCGCCAGAGGCTGGAGCCCTG
GTACCACATCATCCTGCCCGATCCGGACGTGGTCGAGATGCTGATGGACAAGACCAGCTTTTACCGTTACGCCCAGCTAA
ACGGCTTCCCCATACCGCGCACCCTGTTCATAGCCAGCAGTGATGACGCAGAAAAGGCTGCCCGGGAACTGACCTTCCCC
TGCATGATCAAGCCGCCGCTCAGCGGCACGCCGCAGTGGGAGCAGAAGAGCAAACTCAAGGCATACCTGGTTTCGACGCC
GGAGGAATTTCTCGAGGTTTACCGGCGCTACGCGGCACTGTCCGACATACTCATCGCCCAGGAGTGGGTTGTGGGCCCGG
TGAGTAGCCTCTATTCGTGCAACTGCTACTTTGACGCGGCCTCACGGCCGGTTGTCACCTTCATCGCCCGAAAGCTGCGT
CAATGGCCTCCCCAGACCGGCGAGAGCTGTCTGGGGGAAGAGTGCCGCAACGACCAGGTGCTAGGCGAGACTATCCGCCT
GTTTTCGGCCGTCAACTATCGCGGCCTTGGCTACGTGGAGATGAAACGGGACGAGCGCACGGGAAGGCACTACATCATCG
AACCGAACGTGGGAAGGCCGACAGGTCGGTCACCCATCGCGGAGGCAGGTGGCGTGGAACTGGTCTACACGATGTATTGC
GACGCCATCGGTCGACCACTGCCCGTGCAACGGGAGCAGCACTACGGGAACGTGAAATGGATCTACCTGCGACGGGACCT
GCAGTCGGCGCTGTATCACTGGCGGCGGGGGGAGCTCACCTTCAGCGACTGGCTGCGCTCGCTGCGCGGCCGGAAGGTGG
ATGCGCTGTTCGCCTGGAATGATCCGGGACCGTTTATCGGCGACCTGACCAGGTCGGTCCGCCTGTACCTGAACCGGGAC
GAGCGCCGGAAGCGGGATTACAGCACCCCCTTCTAG

Upstream 100 bases:

>100_bases
GGGTGATGTACTCTTCCCCGCTCACCCGTACCCGCTGCGCAGGTCGCCTGCCCTCCCCCTCTTGGTGGCCGCAGACAGGC
CGTGCGAAGAGAGGAGAGAG

Downstream 100 bases:

>100_bases
CAATGCCCGAATCGCTGACAGCTCGCCGTACGCCGTCGGCTTGACAGGGAACGCCATGAGAATCGTACGCACGCTGGACG
AACATGCCTGGAGAAAGTTT

Product: ATP-grasp enzyme-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MMTPSASNKQKQPFALVIGLDHVNGIQTARILADRGVAVIGVAKDPEHYCCRTRVCSRIVFTDTTSDALIDSLETLGPEL
GEKGVLFPCLDPQVLLVSRNRQRLEPWYHIILPDPDVVEMLMDKTSFYRYAQLNGFPIPRTLFIASSDDAEKAARELTFP
CMIKPPLSGTPQWEQKSKLKAYLVSTPEEFLEVYRRYAALSDILIAQEWVVGPVSSLYSCNCYFDAASRPVVTFIARKLR
QWPPQTGESCLGEECRNDQVLGETIRLFSAVNYRGLGYVEMKRDERTGRHYIIEPNVGRPTGRSPIAEAGGVELVYTMYC
DAIGRPLPVQREQHYGNVKWIYLRRDLQSALYHWRRGELTFSDWLRSLRGRKVDALFAWNDPGPFIGDLTRSVRLYLNRD
ERRKRDYSTPF

Sequences:

>Translated_411_residues
MMTPSASNKQKQPFALVIGLDHVNGIQTARILADRGVAVIGVAKDPEHYCCRTRVCSRIVFTDTTSDALIDSLETLGPEL
GEKGVLFPCLDPQVLLVSRNRQRLEPWYHIILPDPDVVEMLMDKTSFYRYAQLNGFPIPRTLFIASSDDAEKAARELTFP
CMIKPPLSGTPQWEQKSKLKAYLVSTPEEFLEVYRRYAALSDILIAQEWVVGPVSSLYSCNCYFDAASRPVVTFIARKLR
QWPPQTGESCLGEECRNDQVLGETIRLFSAVNYRGLGYVEMKRDERTGRHYIIEPNVGRPTGRSPIAEAGGVELVYTMYC
DAIGRPLPVQREQHYGNVKWIYLRRDLQSALYHWRRGELTFSDWLRSLRGRKVDALFAWNDPGPFIGDLTRSVRLYLNRD
ERRKRDYSTPF
>Mature_411_residues
MMTPSASNKQKQPFALVIGLDHVNGIQTARILADRGVAVIGVAKDPEHYCCRTRVCSRIVFTDTTSDALIDSLETLGPEL
GEKGVLFPCLDPQVLLVSRNRQRLEPWYHIILPDPDVVEMLMDKTSFYRYAQLNGFPIPRTLFIASSDDAEKAARELTFP
CMIKPPLSGTPQWEQKSKLKAYLVSTPEEFLEVYRRYAALSDILIAQEWVVGPVSSLYSCNCYFDAASRPVVTFIARKLR
QWPPQTGESCLGEECRNDQVLGETIRLFSAVNYRGLGYVEMKRDERTGRHYIIEPNVGRPTGRSPIAEAGGVELVYTMYC
DAIGRPLPVQREQHYGNVKWIYLRRDLQSALYHWRRGELTFSDWLRSLRGRKVDALFAWNDPGPFIGDLTRSVRLYLNRD
ERRKRDYSTPF

Specific function: Unknown

COG id: COG3919

COG function: function code R; Predicted ATP-grasp enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47011; Mature: 47011

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTPSASNKQKQPFALVIGLDHVNGIQTARILADRGVAVIGVAKDPEHYCCRTRVCSRIV
CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCEEE
FTDTTSDALIDSLETLGPELGEKGVLFPCLDPQVLLVSRNRQRLEPWYHIILPDPDVVEM
EECCCHHHHHHHHHHHCHHHCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCHHHHHH
LMDKTSFYRYAQLNGFPIPRTLFIASSDDAEKAARELTFPCMIKPPLSGTPQWEQKSKLK
HHHHHHHEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCEEECCCCCCCCCHHHHHCCC
AYLVSTPEEFLEVYRRYAALSDILIAQEWVVGPVSSLYSCNCYFDAASRPVVTFIARKLR
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCHHHHHHHHHHH
QWPPQTGESCLGEECRNDQVLGETIRLFSAVNYRGLGYVEMKRDERTGRHYIIEPNVGRP
HCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCC
TGRSPIAEAGGVELVYTMYCDAIGRPLPVQREQHYGNVKWIYLRRDLQSALYHWRRGELT
CCCCCCCCCCCCEEEHEEHHHHHCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHCCCEE
FSDWLRSLRGRKVDALFAWNDPGPFIGDLTRSVRLYLNRDERRKRDYSTPF
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHEEEECCCHHHHCCCCCCC
>Mature Secondary Structure
MMTPSASNKQKQPFALVIGLDHVNGIQTARILADRGVAVIGVAKDPEHYCCRTRVCSRIV
CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCEEE
FTDTTSDALIDSLETLGPELGEKGVLFPCLDPQVLLVSRNRQRLEPWYHIILPDPDVVEM
EECCCHHHHHHHHHHHCHHHCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCHHHHHH
LMDKTSFYRYAQLNGFPIPRTLFIASSDDAEKAARELTFPCMIKPPLSGTPQWEQKSKLK
HHHHHHHEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCEEECCCCCCCCCHHHHHCCC
AYLVSTPEEFLEVYRRYAALSDILIAQEWVVGPVSSLYSCNCYFDAASRPVVTFIARKLR
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCHHHHHHHHHHH
QWPPQTGESCLGEECRNDQVLGETIRLFSAVNYRGLGYVEMKRDERTGRHYIIEPNVGRP
HCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCC
TGRSPIAEAGGVELVYTMYCDAIGRPLPVQREQHYGNVKWIYLRRDLQSALYHWRRGELT
CCCCCCCCCCCCEEEHEEHHHHHCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHCCCEE
FSDWLRSLRGRKVDALFAWNDPGPFIGDLTRSVRLYLNRDERRKRDYSTPF
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHEEEECCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA