| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118580567
Identifier: 118580567
GI number: 118580567
Start: 2313889
End: 2314353
Strand: Reverse
Name: 118580567
Synonym: Ppro_2151
Alternate gene names: NA
Gene position: 2314353-2313889 (Counterclockwise)
Preceding gene: 118580573
Following gene: 118580563
Centisome position: 57.74
GC content: 51.4
Gene sequence:
>465_bases ATGAGCATTTTTGCAGCCAGTGATGTTTTGCAGTTTGCCGTACGCATGGAGGAGAATGGTGGGCTCTTTTATCGTAAGGC CGCCGAACTGTCCGAGAAGAGCGAAGCGAAAAAATTGTTTCAGCACCTGGCCTCCGAAGAGGCAGAGCATAAGAAAACAT TCGAAAAGTTTCTTTCCCAGGTAACTCTGTATGAGCCGACCGAGGATTATCCGGGCGAATATCTCGCCTACCTCCACAAC TACATCGACGGCAAGGTGTTCTTCACTGACGATACCTGCGCGCTGAAGTCCTTCGACGTTGCCAGCGCCCTGGACTTCGC CATCCAGCGGGAGATGGACGCCATTCTCTATTACACGGAACTGAAGGCTTTCGTGAGCGCGGACGACCAGAAATCCATCG ACGCGATCATCGAAGAAGAGCGCAAGCATTTCGCGCAACTCTCTGAAATACGGAAGAATATCTGA
Upstream 100 bases:
>100_bases CGCCGTTGATGCTAAAACAGGGTTCAATGCCGATTGACACCCACCTTTTTGGGTGGTAGTATGCCCGCCAAATAACCGCA TACGGAAGGAGTTCAATCAA
Downstream 100 bases:
>100_bases ATAATACCGGCTGCGCGGCCAAAGCGGTATACAAAAACCTCCCCCTTCATCGAAGCGGGAGGTTTTTTTGCGAAAAGTGT GCCTCCGGCAATGAATCACT
Product: rubrerythrin
Products: NA
Alternate protein names: Rubrerythrin Subfamily
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSIFAASDVLQFAVRMEENGGLFYRKAAELSEKSEAKKLFQHLASEEAEHKKTFEKFLSQVTLYEPTEDYPGEYLAYLHN YIDGKVFFTDDTCALKSFDVASALDFAIQREMDAILYYTELKAFVSADDQKSIDAIIEEERKHFAQLSEIRKNI
Sequences:
>Translated_154_residues MSIFAASDVLQFAVRMEENGGLFYRKAAELSEKSEAKKLFQHLASEEAEHKKTFEKFLSQVTLYEPTEDYPGEYLAYLHN YIDGKVFFTDDTCALKSFDVASALDFAIQREMDAILYYTELKAFVSADDQKSIDAIIEEERKHFAQLSEIRKNI >Mature_153_residues SIFAASDVLQFAVRMEENGGLFYRKAAELSEKSEAKKLFQHLASEEAEHKKTFEKFLSQVTLYEPTEDYPGEYLAYLHNY IDGKVFFTDDTCALKSFDVASALDFAIQREMDAILYYTELKAFVSADDQKSIDAIIEEERKHFAQLSEIRKNI
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17747; Mature: 17616
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFAASDVLQFAVRMEENGGLFYRKAAELSEKSEAKKLFQHLASEEAEHKKTFEKFLSQ CCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTLYEPTEDYPGEYLAYLHNYIDGKVFFTDDTCALKSFDVASALDFAIQREMDAILYYTE CCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH LKAFVSADDQKSIDAIIEEERKHFAQLSEIRKNI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIFAASDVLQFAVRMEENGGLFYRKAAELSEKSEAKKLFQHLASEEAEHKKTFEKFLSQ CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTLYEPTEDYPGEYLAYLHNYIDGKVFFTDDTCALKSFDVASALDFAIQREMDAILYYTE CCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH LKAFVSADDQKSIDAIIEEERKHFAQLSEIRKNI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA