| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580545
Identifier: 118580545
GI number: 118580545
Start: 2287539
End: 2288936
Strand: Reverse
Name: 118580545
Synonym: Ppro_2129
Alternate gene names: NA
Gene position: 2288936-2287539 (Counterclockwise)
Preceding gene: 118580546
Following gene: 118580544
Centisome position: 57.11
GC content: 56.8
Gene sequence:
>1398_bases ATGAGTAAGCCGACCGACCTTAACGACCTTCATCAATTTGCTGGGCCGGAAGCTGTCAAGGCCTGCATTGAAGCAGCAGC ACCCGTGACGGGCGCCCCGTCGAGCACTTCGGAAATATCGCCTGATGAATGGCCGCCAGCAATTGACCTAGTGGAGCTAT CCAAGAAGCCCCCCACCCCACCGAGGCACATAATTGACGGGTGGTTGCCGGAGGGATACGCAACACTGCTTTCGGCGCAT GGCGGCACGGGGAAGTCAACCATCGCATTACACCAGGCTGTTTGTATCGCCCTGGGACACGACTTCTTTGGATTGCCGGT TGAACGTCGCAAGGTGAAGTATCTCAGTTGTGAAGATCGGGGCGATGTATTGCACTGGCGGCTTGCCAGAACATGCACCT ACCTGGGGGTTTCGATAGCCGACCTTGACGGCTGGCTGGGGCTGCTGGACCTCGTGGGCCACGACACTATCCTTTTTCAG TCAGCGAATGGCGATGAAACCCACATCACCGCCGCCTATCGCCACTTGGCTGCACGGATTCGGCGCGAAGGTTATCAAGT AGTCTACGTGGATGGTATTTCGGACACGTACAACGGGAACGAAAACGCCCGCGCCGAGGTGAAAGCCTTCGTGAACTGCC TCCTGGCAACTATCCCCCTGGACGGCGCGGTGGTTTTGATAGGACATGTTGCAAAGCTGACCGCCTTCACCAAAACCAGC ACCGAAGGCTATTCGGGCTCTACCTCCTGGCACAATAGCGTTCGCGCCCGCTGGTATCTGTACCCCGAAACTAAATTCGG TGAAGAGGCCGCAGAGAAGACCGGGGAGCTGCTCCTGGAGCTCCAAAAATCCAATCTGGGGCCGACATCTGGAGCAATGC GCTTCAGGTGGGACGATTCCACCGGCATGTTCGTGGGACATACTGAGCGCAGCGAGGGGCCAATGGACCGAAATTTCCGC GAGCAAGAGGAGCGGGAGGGGATCCTTGCCGCGTTCATGACGTGCCCGGATGGCCATATTCCAGCGGCATCTTCAGGTCC ACGTACTGCCTTCCACGTACTGTCTGTTCAACCGAATTTTCCCTCCTCGTTACGTGCTGGCAAGGCTGAAAAAAAGCGTT TTTGGCGTCACATGGAAGAACTGCGGGCAATGGGCTTTATTGAGGAGTCCACCATTACCCGCAGCGACCGCCACAAGATG CGCGTTTTAGTGCCTACAGACAAGGCTTGCGGGCATGCGGGCAATGATGAAAATGAGCATTCACAGCATATCACCCGCAA CCCTAAGTGCGGGCATGCGGGCAATGCCGCACTAGGGGTTATAGGGGATATATATCCCGCACATGGCCCCGGTATCCCCA CCTTCACTGAATCAGATTTCGAGGGGGTGACCCCATGA
Upstream 100 bases:
>100_bases GACCAATGGACCGAAGGTAACCCCGGATTGACCAAGGCAACCGAGGCGGCGCGGGCCGTGGGCGGCTTGCTGGCAGTACC CTTTATTGAGGGGGTACGTC
Downstream 100 bases:
>100_bases AGGTCCGAGCCATCTGTGAGATCACGACCACCAGGGGCACCATACCTGCCGGTCAGGTTATCGAGGTCAGCCCGACGCTC TTGCGGCGGTTGGCGGGAAA
Product: ATPase-like protein
Products: NA
Alternate protein names: ATPase
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MSKPTDLNDLHQFAGPEAVKACIEAAAPVTGAPSSTSEISPDEWPPAIDLVELSKKPPTPPRHIIDGWLPEGYATLLSAH GGTGKSTIALHQAVCIALGHDFFGLPVERRKVKYLSCEDRGDVLHWRLARTCTYLGVSIADLDGWLGLLDLVGHDTILFQ SANGDETHITAAYRHLAARIRREGYQVVYVDGISDTYNGNENARAEVKAFVNCLLATIPLDGAVVLIGHVAKLTAFTKTS TEGYSGSTSWHNSVRARWYLYPETKFGEEAAEKTGELLLELQKSNLGPTSGAMRFRWDDSTGMFVGHTERSEGPMDRNFR EQEEREGILAAFMTCPDGHIPAASSGPRTAFHVLSVQPNFPSSLRAGKAEKKRFWRHMEELRAMGFIEESTITRSDRHKM RVLVPTDKACGHAGNDENEHSQHITRNPKCGHAGNAALGVIGDIYPAHGPGIPTFTESDFEGVTP
Sequences:
>Translated_465_residues MSKPTDLNDLHQFAGPEAVKACIEAAAPVTGAPSSTSEISPDEWPPAIDLVELSKKPPTPPRHIIDGWLPEGYATLLSAH GGTGKSTIALHQAVCIALGHDFFGLPVERRKVKYLSCEDRGDVLHWRLARTCTYLGVSIADLDGWLGLLDLVGHDTILFQ SANGDETHITAAYRHLAARIRREGYQVVYVDGISDTYNGNENARAEVKAFVNCLLATIPLDGAVVLIGHVAKLTAFTKTS TEGYSGSTSWHNSVRARWYLYPETKFGEEAAEKTGELLLELQKSNLGPTSGAMRFRWDDSTGMFVGHTERSEGPMDRNFR EQEEREGILAAFMTCPDGHIPAASSGPRTAFHVLSVQPNFPSSLRAGKAEKKRFWRHMEELRAMGFIEESTITRSDRHKM RVLVPTDKACGHAGNDENEHSQHITRNPKCGHAGNAALGVIGDIYPAHGPGIPTFTESDFEGVTP >Mature_464_residues SKPTDLNDLHQFAGPEAVKACIEAAAPVTGAPSSTSEISPDEWPPAIDLVELSKKPPTPPRHIIDGWLPEGYATLLSAHG GTGKSTIALHQAVCIALGHDFFGLPVERRKVKYLSCEDRGDVLHWRLARTCTYLGVSIADLDGWLGLLDLVGHDTILFQS ANGDETHITAAYRHLAARIRREGYQVVYVDGISDTYNGNENARAEVKAFVNCLLATIPLDGAVVLIGHVAKLTAFTKTST EGYSGSTSWHNSVRARWYLYPETKFGEEAAEKTGELLLELQKSNLGPTSGAMRFRWDDSTGMFVGHTERSEGPMDRNFRE QEEREGILAAFMTCPDGHIPAASSGPRTAFHVLSVQPNFPSSLRAGKAEKKRFWRHMEELRAMGFIEESTITRSDRHKMR VLVPTDKACGHAGNDENEHSQHITRNPKCGHAGNAALGVIGDIYPAHGPGIPTFTESDFEGVTP
Specific function: Unknown
COG id: COG3598
COG function: function code L; RecA-family ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50846; Mature: 50714
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPTDLNDLHQFAGPEAVKACIEAAAPVTGAPSSTSEISPDEWPPAIDLVELSKKPPTP CCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCC PRHIIDGWLPEGYATLLSAHGGTGKSTIALHQAVCIALGHDFFGLPVERRKVKYLSCEDR HHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHCCCHHHCEEEEEECCCC GDVLHWRLARTCTYLGVSIADLDGWLGLLDLVGHDTILFQSANGDETHITAAYRHLAARI CCEEHHHHHHHHHHHCCEEEHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH RREGYQVVYVDGISDTYNGNENARAEVKAFVNCLLATIPLDGAVVLIGHVAKLTAFTKTS HHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCC TEGYSGSTSWHNSVRARWYLYPETKFGEEAAEKTGELLLELQKSNLGPTSGAMRFRWDDS CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC TGMFVGHTERSEGPMDRNFREQEEREGILAAFMTCPDGHIPAASSGPRTAFHVLSVQPNF CCEEEECCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC PSSLRAGKAEKKRFWRHMEELRAMGFIEESTITRSDRHKMRVLVPTDKACGHAGNDENEH CHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECCHHCCCCCCCCCHH SQHITRNPKCGHAGNAALGVIGDIYPAHGPGIPTFTESDFEGVTP HHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKPTDLNDLHQFAGPEAVKACIEAAAPVTGAPSSTSEISPDEWPPAIDLVELSKKPPTP CCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCC PRHIIDGWLPEGYATLLSAHGGTGKSTIALHQAVCIALGHDFFGLPVERRKVKYLSCEDR HHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHCCCHHHCEEEEEECCCC GDVLHWRLARTCTYLGVSIADLDGWLGLLDLVGHDTILFQSANGDETHITAAYRHLAARI CCEEHHHHHHHHHHHCCEEEHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH RREGYQVVYVDGISDTYNGNENARAEVKAFVNCLLATIPLDGAVVLIGHVAKLTAFTKTS HHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCC TEGYSGSTSWHNSVRARWYLYPETKFGEEAAEKTGELLLELQKSNLGPTSGAMRFRWDDS CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC TGMFVGHTERSEGPMDRNFREQEEREGILAAFMTCPDGHIPAASSGPRTAFHVLSVQPNF CCEEEECCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC PSSLRAGKAEKKRFWRHMEELRAMGFIEESTITRSDRHKMRVLVPTDKACGHAGNDENEH CHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECCHHCCCCCCCCCHH SQHITRNPKCGHAGNAALGVIGDIYPAHGPGIPTFTESDFEGVTP HHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA