| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is ymxG [H]
Identifier: 118580533
GI number: 118580533
Start: 2276361
End: 2277650
Strand: Reverse
Name: ymxG [H]
Synonym: Ppro_2117
Alternate gene names: 118580533
Gene position: 2277650-2276361 (Counterclockwise)
Preceding gene: 118580536
Following gene: 118580531
Centisome position: 56.83
GC content: 59.46
Gene sequence:
>1290_bases ATGGGTAAAAAGCAGGGTATAGTGAAATCCATGATCTGCTCAACCACCCTCGACAACGGCATCCGGGTTGTCACCCAGCG CGTGAAGTACATGCACACCGTATCCATGGGCATCTGGGTGGCCAACGGAACACGGCATGAGGCTCCGCACCTTAACGGCA TCGCCCACTTTATCGAGCATCTGCTCTTCAAGGGGACCGCCCGGCGCTCGGCCCGCCAGATAGCCATGGAGATCGACTCC ATGGGAGGGATTCTCAACGCCTTCACCAGCCACGAGTACGTCTGCTACTACGCCAAGGTTCTGGCGAAGTTCCTGCCGCG CATAACCGACCTGCTGTGTGACATCTTTCTCTGTTCTTCCTTCCCCAGTGAAGAGATCGAGCGCGAACGCAGGGTCATCC TGCAGGAAATCAAGATGCGCGACGATACGCCGGACGTGTTCATCCACGATCAGTTTCACCAGAACTTCTGGCAGGGGGAC TCCCTGGGGTTGACCATCCCCGGCTCCCACGAGACGGTGAGCTCCCTTTCCCGTGAACAGATCATCGACTACAAGCAGAG TCGTTACCGACCGCGGGACATCGTCATCTCCGCCGCCGGAAATGTCAGGCATGAAGAGCTGCTCTCATTGATGGAAGGCG CCTTTTCCGGCATGACCTCTGATCAGCGCTCCCGGACGGAAGCGCCGGTTGCACACGTCGGACCGCGGATAAACCAGTGC GAGCGCGACCTGGAGCAGACCCTGCTCTGCATGGGGACCAACGGGCTCTCCCAGGACCATCCCGACCGCTTTGCCCTGCA TCTGCTGAACACGGTCCTGGGGGGAGGCATGAGTTCGCGCCTGTTCCAGGAGGTGCGTGAAAATCGGGGGCTGGCCTATT CGATCTATTCCTATGTCATCTCCCATGCCGATTGCGGTGCCCTGGTGATCCATGCCGGTACGGAGCAGGAGCAGTGCCGG GAGGTGATTGAGATCGCGCTGCGGCAGATGGGGCAACTCAAGCGGGAAATGGTCCCCCAGGATGAGCTCGATTCAGCCCG GGAGCAGCTCAAGGGCAACCTGCTGATGTCTCTGGAGAGCAGCGACAACCTGATGACCCGGCTGGCCAAGAACGATATTT ATCTGCATCGCAACCAGACCGTTGAGGAGGTGCTGGCCGCCTTTGATGCCGTGACCGGAGAAGATATCCTGCGGTTGGGC AACCAGCTCTTCGACGGAAGCCGCATCCACCTGGAAGTGATGGGGAAAACGTGGCATACCGGGCTGACGGAGGATCTGCT GCGGCTCTGA
Upstream 100 bases:
>100_bases CCTGCTGTTTTTATTCGGAGATGCTTGCATGTAAGTAGCAAAATATCGGCGCTTCCTGCAAGCGTTTGTTTAAAACCAAA TAATATTCAGTGGGTTGGAC
Downstream 100 bases:
>100_bases TCCCGGCGCCTGGCGCACCTTTCACGACAGCATCCCCCTGTGGCTATCCCCTCAGATTTTTCCCGTATGGCCGAATCCCC CTGCTCCCCGTTCACTCTCC
Product: processing peptidase
Products: NA
Alternate protein names: ORFP [H]
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MGKKQGIVKSMICSTTLDNGIRVVTQRVKYMHTVSMGIWVANGTRHEAPHLNGIAHFIEHLLFKGTARRSARQIAMEIDS MGGILNAFTSHEYVCYYAKVLAKFLPRITDLLCDIFLCSSFPSEEIERERRVILQEIKMRDDTPDVFIHDQFHQNFWQGD SLGLTIPGSHETVSSLSREQIIDYKQSRYRPRDIVISAAGNVRHEELLSLMEGAFSGMTSDQRSRTEAPVAHVGPRINQC ERDLEQTLLCMGTNGLSQDHPDRFALHLLNTVLGGGMSSRLFQEVRENRGLAYSIYSYVISHADCGALVIHAGTEQEQCR EVIEIALRQMGQLKREMVPQDELDSAREQLKGNLLMSLESSDNLMTRLAKNDIYLHRNQTVEEVLAAFDAVTGEDILRLG NQLFDGSRIHLEVMGKTWHTGLTEDLLRL
Sequences:
>Translated_429_residues MGKKQGIVKSMICSTTLDNGIRVVTQRVKYMHTVSMGIWVANGTRHEAPHLNGIAHFIEHLLFKGTARRSARQIAMEIDS MGGILNAFTSHEYVCYYAKVLAKFLPRITDLLCDIFLCSSFPSEEIERERRVILQEIKMRDDTPDVFIHDQFHQNFWQGD SLGLTIPGSHETVSSLSREQIIDYKQSRYRPRDIVISAAGNVRHEELLSLMEGAFSGMTSDQRSRTEAPVAHVGPRINQC ERDLEQTLLCMGTNGLSQDHPDRFALHLLNTVLGGGMSSRLFQEVRENRGLAYSIYSYVISHADCGALVIHAGTEQEQCR EVIEIALRQMGQLKREMVPQDELDSAREQLKGNLLMSLESSDNLMTRLAKNDIYLHRNQTVEEVLAAFDAVTGEDILRLG NQLFDGSRIHLEVMGKTWHTGLTEDLLRL >Mature_428_residues GKKQGIVKSMICSTTLDNGIRVVTQRVKYMHTVSMGIWVANGTRHEAPHLNGIAHFIEHLLFKGTARRSARQIAMEIDSM GGILNAFTSHEYVCYYAKVLAKFLPRITDLLCDIFLCSSFPSEEIERERRVILQEIKMRDDTPDVFIHDQFHQNFWQGDS LGLTIPGSHETVSSLSREQIIDYKQSRYRPRDIVISAAGNVRHEELLSLMEGAFSGMTSDQRSRTEAPVAHVGPRINQCE RDLEQTLLCMGTNGLSQDHPDRFALHLLNTVLGGGMSSRLFQEVRENRGLAYSIYSYVISHADCGALVIHAGTEQEQCRE VIEIALRQMGQLKREMVPQDELDSAREQLKGNLLMSLESSDNLMTRLAKNDIYLHRNQTVEEVLAAFDAVTGEDILRLGN QLFDGSRIHLEVMGKTWHTGLTEDLLRL
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=393, Percent_Identity=32.5699745547074, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI46593007, Length=307, Percent_Identity=32.2475570032573, Blast_Score=161, Evalue=9e-40, Organism=Homo sapiens, GI24308013, Length=422, Percent_Identity=28.436018957346, Blast_Score=147, Evalue=1e-35, Organism=Escherichia coli, GI1787770, Length=220, Percent_Identity=23.1818181818182, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71999683, Length=421, Percent_Identity=27.0783847980998, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17553678, Length=389, Percent_Identity=25.706940874036, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17510601, Length=426, Percent_Identity=20.8920187793427, Blast_Score=83, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323192, Length=425, Percent_Identity=29.1764705882353, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6321813, Length=412, Percent_Identity=24.7572815533981, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6319426, Length=414, Percent_Identity=21.0144927536232, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357875, Length=387, Percent_Identity=29.7157622739018, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24646943, Length=387, Percent_Identity=29.7157622739018, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI19921772, Length=426, Percent_Identity=24.1784037558685, Blast_Score=128, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 48527; Mature: 48396
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKQGIVKSMICSTTLDNGIRVVTQRVKYMHTVSMGIWVANGTRHEAPHLNGIAHFIEH CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHH LLFKGTARRSARQIAMEIDSMGGILNAFTSHEYVCYYAKVLAKFLPRITDLLCDIFLCSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPSEEIERERRVILQEIKMRDDTPDVFIHDQFHQNFWQGDSLGLTIPGSHETVSSLSREQ CCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHCCCCCCEEECCCCHHHHHHHHHHH IIDYKQSRYRPRDIVISAAGNVRHEELLSLMEGAFSGMTSDQRSRTEAPVAHVGPRINQC HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCHHHH ERDLEQTLLCMGTNGLSQDHPDRFALHLLNTVLGGGMSSRLFQEVRENRGLAYSIYSYVI HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHH SHADCGALVIHAGTEQEQCREVIEIALRQMGQLKREMVPQDELDSAREQLKGNLLMSLES HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECC SDNLMTRLAKNDIYLHRNQTVEEVLAAFDAVTGEDILRLGNQLFDGSRIHLEVMGKTWHT CHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCHHCC GLTEDLLRL CHHHHHHCC >Mature Secondary Structure GKKQGIVKSMICSTTLDNGIRVVTQRVKYMHTVSMGIWVANGTRHEAPHLNGIAHFIEH CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHH LLFKGTARRSARQIAMEIDSMGGILNAFTSHEYVCYYAKVLAKFLPRITDLLCDIFLCSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPSEEIERERRVILQEIKMRDDTPDVFIHDQFHQNFWQGDSLGLTIPGSHETVSSLSREQ CCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHCCCCCCEEECCCCHHHHHHHHHHH IIDYKQSRYRPRDIVISAAGNVRHEELLSLMEGAFSGMTSDQRSRTEAPVAHVGPRINQC HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCHHHH ERDLEQTLLCMGTNGLSQDHPDRFALHLLNTVLGGGMSSRLFQEVRENRGLAYSIYSYVI HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHH SHADCGALVIHAGTEQEQCREVIEIALRQMGQLKREMVPQDELDSAREQLKGNLLMSLES HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECC SDNLMTRLAKNDIYLHRNQTVEEVLAAFDAVTGEDILRLGNQLFDGSRIHLEVMGKTWHT CHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCHHCC GLTEDLLRL CHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 8098035 [H]