Click here to switch to the map view.

The map label for this gene is ygaV [C]

Identifier: 118580398

GI number: 118580398

Start: 2124930

End: 2125235

Strand: Reverse

Name: ygaV [C]

Synonym: Ppro_1982

Alternate gene names: 118580398

Gene position: 2125235-2124930 (Counterclockwise)

Preceding gene: 118580411

Following gene: 118580397

Centisome position: 53.02

GC content: 59.8

Gene sequence:

>306_bases
ATGGCATACCATCCAGCAAAGGCGCGGCTCATGGAATCTTCAGAAACAAGGGACTACAGCCAGGAGGCGGAGATCCTCAA
GGTGCTCGGTCATCCGGTCCGGCTCAAGATAGCGGCAGGGTTGTGCACCAAGGAGTGCAACGTCAAGAATATATGGGAAT
GCCTGGGTCTGCCCCAGGCAACGGTTTCCCAACACCTGGCGCTGCTCAAGAACCGGGGCATCATCACCGGCAGGCGCGAG
GGGACCGGGGTGCGCTACAGCGTCACCAACCCCATGGTGAAGAAGATCATCGCCGCGCTGGAGTGA

Upstream 100 bases:

>100_bases
GGCTTGACAGCGGGGGGGATATCTCTATTATGAATGAAATTTTCGCGGGTTGGGGCGTGCTCTCCGTCGCACCGCTCTCG
CGAACCCACGCCAGGGGAGC

Downstream 100 bases:

>100_bases
ACGCTTCTGGCGACCGGGGAGCGTTCTTTTGCCGCCATGCTGTCGCTGGTCAACCACTGAAGCTGCTTGGGGAGATCATT
CATGTTCATCGTGTCACTGC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator Arsr Family

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MAYHPAKARLMESSETRDYSQEAEILKVLGHPVRLKIAAGLCTKECNVKNIWECLGLPQATVSQHLALLKNRGIITGRRE
GTGVRYSVTNPMVKKIIAALE

Sequences:

>Translated_101_residues
MAYHPAKARLMESSETRDYSQEAEILKVLGHPVRLKIAAGLCTKECNVKNIWECLGLPQATVSQHLALLKNRGIITGRRE
GTGVRYSVTNPMVKKIIAALE
>Mature_100_residues
AYHPAKARLMESSETRDYSQEAEILKVLGHPVRLKIAAGLCTKECNVKNIWECLGLPQATVSQHLALLKNRGIITGRREG
TGVRYSVTNPMVKKIIAALE

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11187; Mature: 11056

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYHPAKARLMESSETRDYSQEAEILKVLGHPVRLKIAAGLCTKECNVKNIWECLGLPQA
CCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCHH
TVSQHLALLKNRGIITGRREGTGVRYSVTNPMVKKIIAALE
HHHHHHHHHHCCCCEECCCCCCCEEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
AYHPAKARLMESSETRDYSQEAEILKVLGHPVRLKIAAGLCTKECNVKNIWECLGLPQA
CCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCHH
TVSQHLALLKNRGIITGRREGTGVRYSVTNPMVKKIIAALE
HHHHHHHHHHCCCCEECCCCCCCEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA